RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 CDK5RAP3Q96JB5 506 aa16.31■□□□□ 0.2
CX3CL1-204ENST00000565912 FAM43AQ8N2R8 423 aa16.31■□□□□ 0.2
CX3CL1-204ENST00000565912 RNF214Q8ND24 703 aa16.31■□□□□ 0.2
CX3CL1-204ENST00000565912 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 AFAP1Q8N556 730 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 WASHC2AQ641Q2 1341 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 ANKRD50Q9ULJ7 1429 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 GNAI3P08754 354 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 ESCO1Q5FWF5 840 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 SYNJ2O15056 1496 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
CX3CL1-204ENST00000565912 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
CX3CL1-204ENST00000565912 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
CX3CL1-204ENST00000565912 WWC2Q6AWC2 1192 aa16.29■□□□□ 0.2
CX3CL1-204ENST00000565912 MTHFSP49914 203 aa16.29■□□□□ 0.2
CX3CL1-204ENST00000565912 KRT18P05783 430 aaKnown RBP16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 SKIDA1Q1XH10 827 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 CNNM1Q9NRU3 951 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 GAS2L2Q8NHY3 880 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 SMC2O95347 1197 aa16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 BRPF1P55201 1214 aaPredicted RBP16.28■□□□□ 0.2
CX3CL1-204ENST00000565912 RDXP35241 583 aaKnown RBP16.27■□□□□ 0.2
CX3CL1-204ENST00000565912 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.2
CX3CL1-204ENST00000565912 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.2
CX3CL1-204ENST00000565912 TRIM5Q9C035 493 aa16.27■□□□□ 0.19
CX3CL1-204ENST00000565912 KINO60870 393 aaKnown RBP16.27■□□□□ 0.19
CX3CL1-204ENST00000565912 MAGEC2Q9UBF1 373 aaPredicted RBP16.26■□□□□ 0.19
CX3CL1-204ENST00000565912 TXLNAP40222 546 aa16.26■□□□□ 0.19
CX3CL1-204ENST00000565912 NEK4P51957 841 aa16.26■□□□□ 0.19
CX3CL1-204ENST00000565912 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
CX3CL1-204ENST00000565912 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
CX3CL1-204ENST00000565912 CEBPZQ03701 1054 aaKnown RBP16.26■□□□□ 0.19
CX3CL1-204ENST00000565912 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
CX3CL1-204ENST00000565912 AAMPQ13685 434 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 TCP11L2Q8N4U5 519 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 CCDC39Q9UFE4 941 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 NASPP49321 788 aaPredicted RBP16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 PRKAR2BP31323 418 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 SYCP1Q15431 976 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 CCDC158Q5M9N0 1113 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 C1orf115Q9H7X2 142 aa16.25■□□□□ 0.19
CX3CL1-204ENST00000565912 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
CX3CL1-204ENST00000565912 HIP1O00291 1037 aa16.24■□□□□ 0.19
CX3CL1-204ENST00000565912 GNL3LQ9NVN8 582 aaKnown RBP16.24■□□□□ 0.19
CX3CL1-204ENST00000565912 MYO6Q9UM54 1294 aa16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 STK38Q15208 465 aa16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 SMARCE1Q969G3 411 aa16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 CCDC7Q96M83 1385 aa16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 CAVIN1Q6NZI2 390 aaKnown RBP16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 EXOSC9Q06265 439 aaKnown RBP16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
CX3CL1-204ENST00000565912 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 TWISTNBQ3B726 338 aaPredicted RBP16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 ERC1Q8IUD2 1116 aa16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 ZNF396Q96N95 335 aaPredicted RBP16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 TXNDC2Q86VQ3 553 aa16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 ERCC4Q92889 916 aaPredicted RBP16.22■□□□□ 0.19
CX3CL1-204ENST00000565912 NFKBIBQ15653 356 aa16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 GNAI2P04899 355 aa16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 PDCP20941 246 aa16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 NOM1Q5C9Z4 860 aaKnown RBP16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 FIBPO43427 364 aa16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 PRPF40AO75400 957 aaKnown RBP16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 SIL1Q9H173 461 aa16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 ZHX3Q9H4I2 956 aa16.21■□□□□ 0.19
CX3CL1-204ENST00000565912 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.18
CX3CL1-204ENST00000565912 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.21■□□□□ 0.18
CX3CL1-204ENST00000565912 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
CX3CL1-204ENST00000565912 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 PDCL3Q9H2J4 239 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 MAP7D2Q96T17 732 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 MRE11P49959 708 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 CABP4P57796 275 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 STK3Q13188 491 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 CFAP70Q5T0N1 1121 aa16.2■□□□□ 0.18
CX3CL1-204ENST00000565912 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 SLC4A2P04920 1241 aa16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 HDGFL1Q5TGJ6 251 aa16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 H0YHG0 523 aa16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 PDZRN3Q9UPQ7 1066 aa16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 SF3B2Q13435 895 aaKnown RBP16.19■□□□□ 0.18
CX3CL1-204ENST00000565912 CNTLNQ9NXG0 1405 aa16.18■□□□□ 0.18
CX3CL1-204ENST00000565912 RBM5P52756 815 aaKnown RBP eCLIP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms