RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 SLC6A16Q9GZN6 736 aa11.98□□□□□ -0.49
KARS-205ENST00000565738 FKBPLQ9UIM3 349 aa11.98□□□□□ -0.49
KARS-205ENST00000565738 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
KARS-205ENST00000565738 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.49
KARS-205ENST00000565738 KCNH2Q12809 1159 aa11.95□□□□□ -0.5
KARS-205ENST00000565738 ADAMTS19Q8TE59 1207 aa11.95□□□□□ -0.5
KARS-205ENST00000565738 EVA1BQ9NVM1 165 aa11.95□□□□□ -0.5
KARS-205ENST00000565738 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
KARS-205ENST00000565738 S1PR4O95977 384 aa11.93□□□□□ -0.5
KARS-205ENST00000565738 FBXO45P0C2W1 286 aa11.91□□□□□ -0.5
KARS-205ENST00000565738 NR1H3Q13133 447 aa11.91□□□□□ -0.5
KARS-205ENST00000565738 HCSTQ9UBK5 93 aa11.91□□□□□ -0.5
KARS-205ENST00000565738 ZBBXA8MT70 800 aa11.9□□□□□ -0.5
KARS-205ENST00000565738 SEMA3FQ13275 785 aa11.9□□□□□ -0.5
KARS-205ENST00000565738 ARMC2Q8NEN0 867 aa11.9□□□□□ -0.5
KARS-205ENST00000565738 ZC3H4Q9UPT8 1303 aaKnown RBP11.89□□□□□ -0.51
KARS-205ENST00000565738 EIF4G2P78344 907 aaKnown RBP eCLIP11.89□□□□□ -0.51
KARS-205ENST00000565738 UNC93B1Q9H1C4 597 aa11.89□□□□□ -0.51
KARS-205ENST00000565738 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
KARS-205ENST00000565738 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
KARS-205ENST00000565738 ALG2Q9H553 416 aa11.88□□□□□ -0.51
KARS-205ENST00000565738 FCF1Q9Y324 198 aaKnown RBP11.88□□□□□ -0.51
KARS-205ENST00000565738 SOX11P35716 441 aa11.87□□□□□ -0.51
KARS-205ENST00000565738 NBPF14Q5TI25 921 aa11.87□□□□□ -0.51
KARS-205ENST00000565738 KCNC4Q03721 635 aa11.86□□□□□ -0.51
KARS-205ENST00000565738 PTK2Q05397 1052 aa11.85□□□□□ -0.51
KARS-205ENST00000565738 PPEF1O14829 653 aaPredicted RBP11.84□□□□□ -0.51
KARS-205ENST00000565738 RFX1P22670 979 aa11.84□□□□□ -0.51
KARS-205ENST00000565738 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
KARS-205ENST00000565738 PCDH10Q9P2E7 1040 aa11.84□□□□□ -0.51
KARS-205ENST00000565738 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
KARS-205ENST00000565738 PDXDC2PQ6P474 469 aa11.83□□□□□ -0.52
KARS-205ENST00000565738 ARHGAP9Q9BRR9 750 aa11.82□□□□□ -0.52
KARS-205ENST00000565738 CARD14Q9BXL6 1004 aa11.82□□□□□ -0.52
KARS-205ENST00000565738 BAP1Q92560 729 aa11.81□□□□□ -0.52
KARS-205ENST00000565738 UCN2Q96RP3 112 aa11.81□□□□□ -0.52
KARS-205ENST00000565738 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
KARS-205ENST00000565738 PCDHB9Q9Y5E1 797 aa11.81□□□□□ -0.52
KARS-205ENST00000565738 ITGBL1O95965 494 aaPredicted RBP11.8□□□□□ -0.52
KARS-205ENST00000565738 AGERQ15109 404 aa11.8□□□□□ -0.52
KARS-205ENST00000565738 OCSTAMPQ9BR26 566 aa11.8□□□□□ -0.52
KARS-205ENST00000565738 GPSM3Q9Y4H4 160 aa11.8□□□□□ -0.52
KARS-205ENST00000565738 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
KARS-205ENST00000565738 PALM3A6NDB9 673 aaPredicted RBP11.79□□□□□ -0.52
KARS-205ENST00000565738 ZBTB33Q86T24 672 aa11.79□□□□□ -0.52
KARS-205ENST00000565738 TFIP11Q9UBB9 837 aaKnown RBP11.79□□□□□ -0.52
KARS-205ENST00000565738 CFAP70Q5T0N1 1121 aa11.78□□□□□ -0.52
KARS-205ENST00000565738 ADAM32Q8TC27 787 aa11.78□□□□□ -0.52
KARS-205ENST00000565738 LMOD1P29536 600 aaPredicted RBP11.77□□□□□ -0.53
KARS-205ENST00000565738 GGCXP38435 758 aa11.77□□□□□ -0.53
KARS-205ENST00000565738 SH3BP5LQ7L8J4 393 aa11.77□□□□□ -0.53
KARS-205ENST00000565738 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.76□□□□□ -0.53
KARS-205ENST00000565738 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
KARS-205ENST00000565738 TBC1D9Q6ZT07 1266 aa11.76□□□□□ -0.53
KARS-205ENST00000565738 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
KARS-205ENST00000565738 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
KARS-205ENST00000565738 PIK3CDO00329 1044 aa11.75□□□□□ -0.53
KARS-205ENST00000565738 ZBTB24O43167 697 aaPredicted RBP11.75□□□□□ -0.53
KARS-205ENST00000565738 BPHLQ86WA6 291 aaPredicted RBP11.73□□□□□ -0.53
KARS-205ENST00000565738 DZIP3Q86Y13 1208 aaKnown RBP11.73□□□□□ -0.53
KARS-205ENST00000565738 ZNF592Q92610 1267 aa11.73□□□□□ -0.53
KARS-205ENST00000565738 PBXIP1Q96AQ6 731 aa11.73□□□□□ -0.53
KARS-205ENST00000565738 ATP9BO43861 1147 aa11.72□□□□□ -0.53
KARS-205ENST00000565738 PPP1R15AO75807 674 aaPredicted RBP11.72□□□□□ -0.53
KARS-205ENST00000565738 SKIP12755 728 aa11.72□□□□□ -0.53
KARS-205ENST00000565738 SLFNL1Q499Z3 407 aa11.72□□□□□ -0.53
KARS-205ENST00000565738 PLA2G2CQ5R387 149 aa11.72□□□□□ -0.53
KARS-205ENST00000565738 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
KARS-205ENST00000565738 ANKLE1Q8NAG6 615 aa11.72□□□□□ -0.53
KARS-205ENST00000565738 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
KARS-205ENST00000565738 MAFBQ9Y5Q3 323 aaPredicted RBP11.72□□□□□ -0.53
KARS-205ENST00000565738 ACIN1Q9UKV3 1341 aaKnown RBP11.71□□□□□ -0.53
KARS-205ENST00000565738 PDIA4P13667 645 aaKnown RBP11.71□□□□□ -0.53
KARS-205ENST00000565738 CDCA8Q53HL2 280 aa11.71□□□□□ -0.53
KARS-205ENST00000565738 SH3BP2P78314 561 aa11.7□□□□□ -0.54
KARS-205ENST00000565738 SH3RF1Q7Z6J0 888 aa11.7□□□□□ -0.54
KARS-205ENST00000565738 RETREG2Q8NC44 543 aa11.7□□□□□ -0.54
KARS-205ENST00000565738 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
KARS-205ENST00000565738 MCCD1P59942 119 aaPredicted RBP11.69□□□□□ -0.54
KARS-205ENST00000565738 TRIM32Q13049 653 aa11.69□□□□□ -0.54
KARS-205ENST00000565738 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
KARS-205ENST00000565738 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
KARS-205ENST00000565738 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
KARS-205ENST00000565738 RNF135Q8IUD6 432 aa11.69□□□□□ -0.54
KARS-205ENST00000565738 FAM174AQ8TBP5 190 aa11.69□□□□□ -0.54
KARS-205ENST00000565738 SLC10A4Q96EP9 437 aa11.68□□□□□ -0.54
KARS-205ENST00000565738 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
KARS-205ENST00000565738 USP17L5A8MUK1 530 aa11.66□□□□□ -0.54
KARS-205ENST00000565738 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
KARS-205ENST00000565738 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
KARS-205ENST00000565738 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
KARS-205ENST00000565738 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
KARS-205ENST00000565738 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
KARS-205ENST00000565738 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
KARS-205ENST00000565738 SRPK2P78362 688 aaKnown RBP11.63□□□□□ -0.55
KARS-205ENST00000565738 SKOR1P84550 965 aa11.63□□□□□ -0.55
KARS-205ENST00000565738 PLPP7Q8NBV4 271 aa11.63□□□□□ -0.55
KARS-205ENST00000565738 VRTNQ9H8Y1 702 aa11.63□□□□□ -0.55
KARS-205ENST00000565738 PHTF2Q8N3S3 785 aa11.62□□□□□ -0.55
KARS-205ENST00000565738 C1QTNF2Q9BXJ5 285 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms