RNA–Protein interactions for RNA: ENST00000565548.1

TUBGCP4-210, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-210ENST00000565548 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
TUBGCP4-210ENST00000565548 MTMR7Q9Y216 660 aa11.32□□□□□ -0.6
TUBGCP4-210ENST00000565548 ARHGEF11O15085 1522 aa11.31□□□□□ -0.6
TUBGCP4-210ENST00000565548 TMEM88BA6NKF7 163 aa11.31□□□□□ -0.6
TUBGCP4-210ENST00000565548 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBGCP4-210ENST00000565548 PUS10Q3MIT2 529 aaKnown RBP11.31□□□□□ -0.6
TUBGCP4-210ENST00000565548 CDCA8Q53HL2 280 aa11.31□□□□□ -0.6
TUBGCP4-210ENST00000565548 ZFRQ96KR1 1074 aaKnown RBP11.31□□□□□ -0.6
TUBGCP4-210ENST00000565548 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
TUBGCP4-210ENST00000565548 NR1H3Q13133 447 aa11.3□□□□□ -0.6
TUBGCP4-210ENST00000565548 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
TUBGCP4-210ENST00000565548 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
TUBGCP4-210ENST00000565548 ATP9BO43861 1147 aa11.29□□□□□ -0.6
TUBGCP4-210ENST00000565548 VRTNQ9H8Y1 702 aa11.28□□□□□ -0.6
TUBGCP4-210ENST00000565548 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
TUBGCP4-210ENST00000565548 CYB5RLQ6IPT4 315 aa11.27□□□□□ -0.61
TUBGCP4-210ENST00000565548 RNF19BQ6ZMZ0 732 aa11.27□□□□□ -0.61
TUBGCP4-210ENST00000565548 ZNF687Q8N1G0 1237 aa11.27□□□□□ -0.61
TUBGCP4-210ENST00000565548 OTUD5Q96G74 571 aa11.27□□□□□ -0.61
TUBGCP4-210ENST00000565548 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
TUBGCP4-210ENST00000565548 TK2O00142 265 aa11.25□□□□□ -0.61
TUBGCP4-210ENST00000565548 F12P00748 615 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-210ENST00000565548 KANK4Q5T7N3 995 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-210ENST00000565548 BRICD5Q6PL45 260 aa11.25□□□□□ -0.61
TUBGCP4-210ENST00000565548 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
TUBGCP4-210ENST00000565548 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
TUBGCP4-210ENST00000565548 ZBBXA8MT70 800 aa11.24□□□□□ -0.61
TUBGCP4-210ENST00000565548 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
TUBGCP4-210ENST00000565548 USB1Q9BQ65 265 aaKnown RBP11.24□□□□□ -0.61
TUBGCP4-210ENST00000565548 FKBPLQ9UIM3 349 aa11.24□□□□□ -0.61
TUBGCP4-210ENST00000565548 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
TUBGCP4-210ENST00000565548 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
TUBGCP4-210ENST00000565548 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
TUBGCP4-210ENST00000565548 PIK3CDO00329 1044 aa11.22□□□□□ -0.61
TUBGCP4-210ENST00000565548 ELOAQ14241 798 aaKnown RBP11.22□□□□□ -0.61
TUBGCP4-210ENST00000565548 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
TUBGCP4-210ENST00000565548 MRPL50Q8N5N7 158 aaKnown RBP11.22□□□□□ -0.61
TUBGCP4-210ENST00000565548 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
TUBGCP4-210ENST00000565548 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
TUBGCP4-210ENST00000565548 ZC3H4Q9UPT8 1303 aaKnown RBP11.21□□□□□ -0.61
TUBGCP4-210ENST00000565548 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
TUBGCP4-210ENST00000565548 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
TUBGCP4-210ENST00000565548 EMP3P54852 163 aa11.19□□□□□ -0.62
TUBGCP4-210ENST00000565548 PTPRNQ16849 979 aa11.19□□□□□ -0.62
TUBGCP4-210ENST00000565548 MAP10Q9P2G4 905 aa11.19□□□□□ -0.62
TUBGCP4-210ENST00000565548 ZMIZ1Q9ULJ6 1067 aa11.19□□□□□ -0.62
TUBGCP4-210ENST00000565548 ST18O60284 1047 aa11.18□□□□□ -0.62
TUBGCP4-210ENST00000565548 JUNDP17535 347 aa11.18□□□□□ -0.62
TUBGCP4-210ENST00000565548 PLEKHM2Q8IWE5 1019 aa11.18□□□□□ -0.62
TUBGCP4-210ENST00000565548 SCUBE3Q8IX30 993 aa11.18□□□□□ -0.62
TUBGCP4-210ENST00000565548 FMNL1O95466 1100 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP4-210ENST00000565548 SND1Q7KZF4 910 aaKnown RBP eCLIP11.17□□□□□ -0.62
TUBGCP4-210ENST00000565548 GNEQ9Y223 722 aaKnown RBP11.17□□□□□ -0.62
TUBGCP4-210ENST00000565548 ZNF608Q9ULD9 1512 aaPredicted RBP11.17□□□□□ -0.62
TUBGCP4-210ENST00000565548 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
TUBGCP4-210ENST00000565548 WIZO95785 1651 aa11.17□□□□□ -0.62
TUBGCP4-210ENST00000565548 USP17L3A6NCW0 530 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 USP17L4A6NCW7 530 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 HRO43593 1189 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 APLP1P51693 650 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 TMEM164Q5U3C3 297 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 USP17L1Q7RTZ2 530 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
TUBGCP4-210ENST00000565548 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
TUBGCP4-210ENST00000565548 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
TUBGCP4-210ENST00000565548 SKIP12755 728 aa11.15□□□□□ -0.62
TUBGCP4-210ENST00000565548 ADGRD1Q6QNK2 874 aa11.15□□□□□ -0.62
TUBGCP4-210ENST00000565548 MARVELD3Q96A59 401 aa11.15□□□□□ -0.62
TUBGCP4-210ENST00000565548 ZNF428Q96B54 188 aa11.15□□□□□ -0.62
TUBGCP4-210ENST00000565548 PPP4CP60510 307 aa11.14□□□□□ -0.63
TUBGCP4-210ENST00000565548 STK32AQ8WU08 396 aa11.14□□□□□ -0.63
TUBGCP4-210ENST00000565548 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 SOWAHBA6NEL2 793 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 NR1I2O75469 434 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 CCDC27Q2M243 656 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 NOVA2Q9UNW9 492 aaKnown RBP11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 GPSM3Q9Y4H4 160 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 PCDHB3Q9Y5E6 796 aa11.13□□□□□ -0.63
TUBGCP4-210ENST00000565548 CHD1O14646 1710 aa11.12□□□□□ -0.63
TUBGCP4-210ENST00000565548 ANKK1Q8NFD2 765 aa11.12□□□□□ -0.63
TUBGCP4-210ENST00000565548 OCSTAMPQ9BR26 566 aa11.12□□□□□ -0.63
TUBGCP4-210ENST00000565548 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
TUBGCP4-210ENST00000565548 HPS5Q9UPZ3 1129 aa11.12□□□□□ -0.63
TUBGCP4-210ENST00000565548 FAM196BA6NMK8 535 aa11.11□□□□□ -0.63
TUBGCP4-210ENST00000565548 CTHP32929 405 aa11.11□□□□□ -0.63
TUBGCP4-210ENST00000565548 RBM25P49756 843 aaKnown RBP11.11□□□□□ -0.63
TUBGCP4-210ENST00000565548 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
TUBGCP4-210ENST00000565548 DEPDC4Q8N2C3 294 aa11.11□□□□□ -0.63
TUBGCP4-210ENST00000565548 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
TUBGCP4-210ENST00000565548 EVA1BQ9NVM1 165 aa11.11□□□□□ -0.63
TUBGCP4-210ENST00000565548 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
TUBGCP4-210ENST00000565548 MSS51Q4VC12 460 aa11.1□□□□□ -0.63
TUBGCP4-210ENST00000565548 PHLDB3Q6NSJ2 640 aa11.1□□□□□ -0.63
TUBGCP4-210ENST00000565548 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
TUBGCP4-210ENST00000565548 TSR3Q9UJK0 312 aaKnown RBP11.1□□□□□ -0.63
TUBGCP4-210ENST00000565548 CFTRP13569 1480 aa11.1□□□□□ -0.63
TUBGCP4-210ENST00000565548 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms