RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 MINK1Q8N4C8 1332 aaPredicted RBP31.47■■■□□ 2.63
RPUSD1-206ENST00000565503 PRR36Q9H6K5 1346 aa31.47■■■□□ 2.63
RPUSD1-206ENST00000565503 ITSN1Q15811 1721 aa31.46■■■□□ 2.63
RPUSD1-206ENST00000565503 RAB3GAP2Q9H2M9 1393 aa31.44■■■□□ 2.62
RPUSD1-206ENST00000565503 WASLO00401 505 aaPredicted RBP31.44■■■□□ 2.62
RPUSD1-206ENST00000565503 THSD7AQ9UPZ6 1657 aa31.43■■■□□ 2.62
RPUSD1-206ENST00000565503 SPATA31A5Q5VU36 1347 aa31.43■■■□□ 2.62
RPUSD1-206ENST00000565503 SPATA31A7Q8IWB4 1347 aa31.43■■■□□ 2.62
RPUSD1-206ENST00000565503 STAC3Q96MF2 364 aa31.42■■■□□ 2.62
RPUSD1-206ENST00000565503 NGDNQ8NEJ9 315 aaKnown RBP31.4■■■□□ 2.62
RPUSD1-206ENST00000565503 ARHGEF28Q8N1W1 1705 aaKnown RBP31.4■■■□□ 2.62
RPUSD1-206ENST00000565503 DCAF11Q8TEB1 546 aa31.37■■■□□ 2.61
RPUSD1-206ENST00000565503 KDM2AQ9Y2K7 1162 aa31.37■■■□□ 2.61
RPUSD1-206ENST00000565503 TNS1Q9HBL0 1735 aaKnown RBP31.36■■■□□ 2.61
RPUSD1-206ENST00000565503 DISP2A7MBM2 1401 aa31.36■■■□□ 2.61
RPUSD1-206ENST00000565503 PAK3O75914 559 aaPredicted RBP31.36■■■□□ 2.61
RPUSD1-206ENST00000565503 PRDM11Q9NQV5 511 aa31.35■■■□□ 2.61
RPUSD1-206ENST00000565503 ATP7BP35670 1465 aa31.34■■■□□ 2.61
RPUSD1-206ENST00000565503 PSDA5PKW4 1024 aaPredicted RBP31.34■■■□□ 2.61
RPUSD1-206ENST00000565503 HRCP23327 699 aa31.34■■■□□ 2.61
RPUSD1-206ENST00000565503 PHRF1Q9P1Y6 1649 aaKnown RBP31.34■■■□□ 2.61
RPUSD1-206ENST00000565503 EN1Q05925 392 aaPredicted RBP31.32■■■□□ 2.6
RPUSD1-206ENST00000565503 SPATA31A1Q5TZJ5 1347 aa31.29■■■□□ 2.6
RPUSD1-206ENST00000565503 FAM182BQ5T319 152 aa31.29■■■□□ 2.6
RPUSD1-206ENST00000565503 NUDT16Q96DE0 195 aaKnown RBP31.29■■■□□ 2.6
RPUSD1-206ENST00000565503 KIAA0232Q92628 1395 aa31.29■■■□□ 2.6
RPUSD1-206ENST00000565503 TOPAZ1Q8N9V7 1692 aa31.28■■■□□ 2.6
RPUSD1-206ENST00000565503 POLR3AO14802 1390 aaPredicted RBP31.23■■■□□ 2.59
RPUSD1-206ENST00000565503 CHRNA2Q15822 529 aa31.22■■■□□ 2.59
RPUSD1-206ENST00000565503 FAM196AQ6ZSG2 479 aa31.22■■■□□ 2.59
RPUSD1-206ENST00000565503 KIAA1210Q9ULL0 1709 aa31.21■■■□□ 2.59
RPUSD1-206ENST00000565503 R3HDM1Q15032 1099 aaKnown RBP31.21■■■□□ 2.59
RPUSD1-206ENST00000565503 CDK19Q9BWU1 502 aa31.2■■■□□ 2.59
RPUSD1-206ENST00000565503 STRN4Q9NRL3 753 aa31.2■■■□□ 2.59
RPUSD1-206ENST00000565503 PARD3Q8TEW0 1356 aa31.18■■■□□ 2.58
RPUSD1-206ENST00000565503 NRKQ7Z2Y5 1582 aa31.18■■■□□ 2.58
RPUSD1-206ENST00000565503 ZC3H6P61129 1189 aaKnown RBP31.18■■■□□ 2.58
RPUSD1-206ENST00000565503 EZH2Q15910 746 aaKnown RBP31.18■■■□□ 2.58
RPUSD1-206ENST00000565503 SSH2Q76I76 1423 aa31.17■■■□□ 2.58
RPUSD1-206ENST00000565503 CAMKK2Q96RR4 588 aa31.17■■■□□ 2.58
RPUSD1-206ENST00000565503 CCDC61Q9Y6R9 512 aa31.17■■■□□ 2.58
RPUSD1-206ENST00000565503 ACEP12821 1306 aa31.17■■■□□ 2.58
RPUSD1-206ENST00000565503 TRIM37O94972 964 aa31.16■■■□□ 2.58
RPUSD1-206ENST00000565503 NBPF8Q3BBV2 869 aa31.16■■■□□ 2.58
RPUSD1-206ENST00000565503 BARGINQ6ZT62 677 aa31.16■■■□□ 2.58
RPUSD1-206ENST00000565503 PLEKHG3A1L390 1219 aa31.15■■■□□ 2.58
RPUSD1-206ENST00000565503 NUTM2GQ5VZR2 741 aa31.15■■■□□ 2.58
RPUSD1-206ENST00000565503 LMO7Q8WWI1 1683 aa31.14■■■□□ 2.58
RPUSD1-206ENST00000565503 RREB1Q92766 1687 aa31.14■■■□□ 2.58
RPUSD1-206ENST00000565503 EVA1CP58658 441 aa31.13■■■□□ 2.57
RPUSD1-206ENST00000565503 CPDO75976 1380 aa31.13■■■□□ 2.57
RPUSD1-206ENST00000565503 CAMTA1Q9Y6Y1 1673 aa31.13■■■□□ 2.57
RPUSD1-206ENST00000565503 USP19O94966 1318 aa31.1■■■□□ 2.57
RPUSD1-206ENST00000565503 APBA3O96018 575 aa31.1■■■□□ 2.57
RPUSD1-206ENST00000565503 USP35Q9P2H5 1018 aa31.1■■■□□ 2.57
RPUSD1-206ENST00000565503 PDE3BQ13370 1112 aa31.09■■■□□ 2.57
RPUSD1-206ENST00000565503 ABTB2Q8N961 1025 aa31.09■■■□□ 2.57
RPUSD1-206ENST00000565503 NUP188Q5SRE5 1749 aa31.09■■■□□ 2.57
RPUSD1-206ENST00000565503 TCP11L2Q8N4U5 519 aa31.07■■■□□ 2.56
RPUSD1-206ENST00000565503 PARP4Q9UKK3 1724 aaKnown RBP31.07■■■□□ 2.56
RPUSD1-206ENST00000565503 LARP1Q6PKG0 1096 aaKnown RBP31.06■■■□□ 2.56
RPUSD1-206ENST00000565503 THRAP3Q9Y2W1 955 aaKnown RBP31.05■■■□□ 2.56
RPUSD1-206ENST00000565503 BRD4O60885 1362 aaPredicted RBP31.04■■■□□ 2.56
RPUSD1-206ENST00000565503 NLRP13Q86W25 1043 aa31.03■■■□□ 2.56
RPUSD1-206ENST00000565503 PPIP5K1Q6PFW1 1433 aa31.02■■■□□ 2.56
RPUSD1-206ENST00000565503 GCP02774 474 aa31■■■□□ 2.55
RPUSD1-206ENST00000565503 COL5A2P05997 1499 aaPredicted RBP31■■■□□ 2.55
RPUSD1-206ENST00000565503 C11orf95C9JLR9 678 aaPredicted RBP30.99■■■□□ 2.55
RPUSD1-206ENST00000565503 NBPF14Q5TI25 921 aa30.99■■■□□ 2.55
RPUSD1-206ENST00000565503 SRPK2P78362 688 aaKnown RBP30.98■■■□□ 2.55
RPUSD1-206ENST00000565503 NBPF1Q3BBV0 1214 aa30.97■■■□□ 2.55
RPUSD1-206ENST00000565503 CENPJQ9HC77 1338 aaPredicted RBP30.97■■■□□ 2.55
RPUSD1-206ENST00000565503 QRICH2Q9H0J4 1663 aa30.97■■■□□ 2.55
RPUSD1-206ENST00000565503 RGPD3A6NKT7 1758 aaPredicted RBP30.95■■■□□ 2.55
RPUSD1-206ENST00000565503 RGPD4Q7Z3J3 1758 aa30.95■■■□□ 2.55
RPUSD1-206ENST00000565503 CRB1P82279 1406 aa30.95■■■□□ 2.54
RPUSD1-206ENST00000565503 SBF2Q86WG5 1849 aa30.94■■■□□ 2.54
RPUSD1-206ENST00000565503 PEAK1Q9H792 1746 aa30.94■■■□□ 2.54
RPUSD1-206ENST00000565503 CABP2Q9NPB3 220 aa30.92■■■□□ 2.54
RPUSD1-206ENST00000565503 SLIT3O75094 1523 aa30.92■■■□□ 2.54
RPUSD1-206ENST00000565503 USP6P35125 1406 aa30.91■■■□□ 2.54
RPUSD1-206ENST00000565503 AATKQ6ZMQ8 1374 aa30.91■■■□□ 2.54
RPUSD1-206ENST00000565503 OVOS2A0A0G2JMS6 1433 aa30.9■■■□□ 2.54
RPUSD1-206ENST00000565503 OVOS2A0A0J9YW53 1432 aa30.9■■■□□ 2.54
RPUSD1-206ENST00000565503 OVOS2Q6IE36 1432 aa30.9■■■□□ 2.54
RPUSD1-206ENST00000565503 LRRC37A3O60309 1634 aa30.9■■■□□ 2.54
RPUSD1-206ENST00000565503 WNK3Q9BYP7 1800 aa30.89■■■□□ 2.53
RPUSD1-206ENST00000565503 COL18A1P39060 1754 aa30.88■■■□□ 2.53
RPUSD1-206ENST00000565503 NLRP6P59044 892 aa30.87■■■□□ 2.53
RPUSD1-206ENST00000565503 PIK3C2AO00443 1686 aa30.86■■■□□ 2.53
RPUSD1-206ENST00000565503 CABP1Q9NZU7 370 aa30.85■■■□□ 2.53
RPUSD1-206ENST00000565503 SPON1Q9HCB6 807 aa30.84■■■□□ 2.53
RPUSD1-206ENST00000565503 ZBTB7CA1YPR0 619 aa30.82■■■□□ 2.52
RPUSD1-206ENST00000565503 PLSCR1O15162 318 aa30.82■■■□□ 2.52
RPUSD1-206ENST00000565503 DDB1Q16531 1140 aa30.82■■■□□ 2.52
RPUSD1-206ENST00000565503 AKAP12Q02952 1782 aa30.82■■■□□ 2.52
RPUSD1-206ENST00000565503 KCNQ2O43526 872 aa30.81■■■□□ 2.52
RPUSD1-206ENST00000565503 PPP1R1BQ9UD71 204 aaPredicted RBP30.8■■■□□ 2.52
RPUSD1-206ENST00000565503 TOM1L2Q6ZVM7 507 aa30.79■■■□□ 2.52
RPUSD1-206ENST00000565503 TRPM1Q7Z4N2 1603 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms