RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 MIA2Q96PC5 1412 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 TNMDQ9H2S6 317 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 JAKMIP3Q5VZ66 844 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 EVC2Q86UK5 1308 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 WDR33Q9C0J8 1336 aaKnown RBP6.02□□□□□ -1.45
SMG1-211ENST00000565324 ESPNB1AK53 854 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 KRT85P78386 507 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 MAP2K1Q02750 393 aaPredicted RBP6.02□□□□□ -1.45
SMG1-211ENST00000565324 GIGYF2Q6Y7W6 1299 aaKnown RBP6.02□□□□□ -1.45
SMG1-211ENST00000565324 CIZ1Q9ULV3 898 aaPredicted RBP6.02□□□□□ -1.45
SMG1-211ENST00000565324 LRRFIP2Q9Y608 721 aaKnown RBP6.02□□□□□ -1.45
SMG1-211ENST00000565324 SMTNL1A8MU46 457 aa6.02□□□□□ -1.45
SMG1-211ENST00000565324 UBXN4Q92575 508 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 USP47Q96K76 1375 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 RBM10P98175 930 aaKnown RBP6.01□□□□□ -1.45
SMG1-211ENST00000565324 FILIP1Q7Z7B0 1213 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 GCOM1H8Y6P7 765 aaPredicted RBP6.01□□□□□ -1.45
SMG1-211ENST00000565324 MYZAPP0CAP1 466 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 EXOC6Q8TAG9 804 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 DNAJC2Q99543 621 aaKnown RBP6.01□□□□□ -1.45
SMG1-211ENST00000565324 STK38Q15208 465 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 SPC24Q8NBT2 197 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 PRKRIP1Q9H875 184 aaPredicted RBP6.01□□□□□ -1.45
SMG1-211ENST00000565324 CEP57L1Q8IYX8 460 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 CFAP45Q9UL16 551 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 COG6Q9Y2V7 657 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 KRT18P05783 430 aaKnown RBP6.01□□□□□ -1.45
SMG1-211ENST00000565324 MCM5P33992 734 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 SKIDA1Q1XH10 827 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 CCDC83Q8IWF9 413 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 PAF1Q8N7H5 531 aa6.01□□□□□ -1.45
SMG1-211ENST00000565324 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.01□□□□□ -1.456e-9■■■□□ 17.2
SMG1-211ENST00000565324 V9GYY5 206 aaPredicted RBP6.01□□□□□ -1.45
SMG1-211ENST00000565324 CARMIL1Q5VZK9 1371 aa6□□□□□ -1.45
SMG1-211ENST00000565324 KIF18AQ8NI77 898 aa6□□□□□ -1.45
SMG1-211ENST00000565324 C6orf163Q5TEZ5 329 aa6□□□□□ -1.45
SMG1-211ENST00000565324 SCAPERQ9BY12 1400 aa6□□□□□ -1.45
SMG1-211ENST00000565324 EID1Q9Y6B2 187 aa6□□□□□ -1.45
SMG1-211ENST00000565324 SPECC1LQ69YQ0 1117 aa6□□□□□ -1.45
SMG1-211ENST00000565324 DDX12PQ92771 950 aa6□□□□□ -1.45
SMG1-211ENST00000565324 FMNL2Q96PY5 1086 aa6□□□□□ -1.45
SMG1-211ENST00000565324 PRDM2Q13029 1718 aa6□□□□□ -1.45
SMG1-211ENST00000565324 SMC1AQ14683 1233 aaKnown RBP6□□□□□ -1.45
SMG1-211ENST00000565324 TAF4BQ92750 862 aa6□□□□□ -1.45
SMG1-211ENST00000565324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6□□□□□ -1.45
SMG1-211ENST00000565324 BRPF1P55201 1214 aaPredicted RBP6□□□□□ -1.45
SMG1-211ENST00000565324 TAOK3Q9H2K8 898 aa6□□□□□ -1.45
SMG1-211ENST00000565324 CUX1P39880 1505 aa6□□□□□ -1.45
SMG1-211ENST00000565324 ARHGAP29Q52LW3 1261 aa6□□□□□ -1.45
SMG1-211ENST00000565324 KIAA1328Q86T90 577 aa6□□□□□ -1.45
SMG1-211ENST00000565324 NEMFO60524 1076 aa6□□□□□ -1.45
SMG1-211ENST00000565324 CDKL5O76039 1030 aa6□□□□□ -1.45
SMG1-211ENST00000565324 VPS36Q86VN1 386 aa6□□□□□ -1.45
SMG1-211ENST00000565324 COG3Q96JB2 828 aa6□□□□□ -1.45
SMG1-211ENST00000565324 GRPEL1Q9HAV7 217 aa6□□□□□ -1.45
SMG1-211ENST00000565324 CUX2O14529 1486 aa6□□□□□ -1.45
SMG1-211ENST00000565324 RAD21O60216 631 aa6□□□□□ -1.45
SMG1-211ENST00000565324 TUBB4BP68371 445 aa6□□□□□ -1.45
SMG1-211ENST00000565324 RRBP1Q9P2E9 1410 aaKnown RBP6□□□□□ -1.45
SMG1-211ENST00000565324 EPB41L2O43491 1005 aaKnown RBP5.99□□□□□ -1.45
SMG1-211ENST00000565324 PPP1R12BO60237 982 aaPredicted RBP5.99□□□□□ -1.45
SMG1-211ENST00000565324 GNAI3P08754 354 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 RNF214Q8ND24 703 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 RUNDC1Q96C34 613 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 CNTLNQ9NXG0 1405 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 CYP46A1Q9Y6A2 500 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 POTEJP0CG39 1038 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 FBXW7Q969H0 707 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 BRD4O60885 1362 aaPredicted RBP5.99□□□□□ -1.45
SMG1-211ENST00000565324 CCDC175P0C221 793 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 EFCAB2Q5VUJ9 269 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 TRIM22Q8IYM9 498 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 GNAI1P63096 354 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 ERC1Q8IUD2 1116 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 TBC1D2BQ9UPU7 963 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 HMGB1P1B2RPK0 211 aaPredicted RBP5.99□□□□□ -1.45
SMG1-211ENST00000565324 SMARCA2P51531 1590 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 DYNC1I1O14576 645 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 TIGD1Q96MW7 591 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 ERICH4A6NGS2 130 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 KIF5CO60282 957 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 CTR9Q6PD62 1173 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 FAM114A1Q8IWE2 563 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 PLEKHH1Q9ULM0 1364 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 SEPT6Q14141 434 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 IL27Q8NEV9 243 aa5.99□□□□□ -1.45
SMG1-211ENST00000565324 DDX23Q9BUQ8 820 aaKnown RBP5.98□□□□□ -1.45
SMG1-211ENST00000565324 PRPF40AO75400 957 aaKnown RBP5.98□□□□□ -1.45
SMG1-211ENST00000565324 IVLP07476 585 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 STAC3Q96MF2 364 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 CCDC7Q96M83 1385 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 GOLGA6L9A6NEM1 432 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 TICAM2Q86XR7 235 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 FKBP5Q13451 457 aaPredicted RBP5.98□□□□□ -1.45
SMG1-211ENST00000565324 NEK4P51957 841 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 DNAAF4Q8WXU2 420 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 PLIN1O60240 522 aa5.98□□□□□ -1.45
SMG1-211ENST00000565324 CASQ1P31415 396 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 L3MBTL2Q969R5 705 aa5.97□□□□□ -1.45
SMG1-211ENST00000565324 CAVIN2O95810 425 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms