RNA–Protein interactions for RNA: ENST00000565142.1

ITGAM-204, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-204ENST00000565142 PPIP5K1Q6PFW1 1433 aa23.17■■□□□ 1.3
ITGAM-204ENST00000565142 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
ITGAM-204ENST00000565142 LMOD2Q6P5Q4 547 aa23.16■■□□□ 1.3
ITGAM-204ENST00000565142 UPF1Q92900 1129 aaKnown RBP eCLIP23.16■■□□□ 1.3
ITGAM-204ENST00000565142 BRWD3Q6RI45 1802 aa23.15■■□□□ 1.3
ITGAM-204ENST00000565142 AKAP12Q02952 1782 aa23.15■■□□□ 1.3
ITGAM-204ENST00000565142 UNC5CLQ8IV45 518 aa23.15■■□□□ 1.3
ITGAM-204ENST00000565142 CCDC61Q9Y6R9 512 aa23.15■■□□□ 1.3
ITGAM-204ENST00000565142 PLEKHG3A1L390 1219 aa23.14■■□□□ 1.29
ITGAM-204ENST00000565142 HAP1P54257 671 aaPredicted RBP23.14■■□□□ 1.29
ITGAM-204ENST00000565142 ACEP12821 1306 aa23.13■■□□□ 1.29
ITGAM-204ENST00000565142 TONSLQ96HA7 1378 aa23.13■■□□□ 1.29
ITGAM-204ENST00000565142 PLEKHG5O94827 1062 aa23.12■■□□□ 1.29
ITGAM-204ENST00000565142 SBNO2Q9Y2G9 1366 aa23.12■■□□□ 1.29
ITGAM-204ENST00000565142 GJD4Q96KN9 370 aaPredicted RBP23.11■■□□□ 1.29
ITGAM-204ENST00000565142 PIK3C2AO00443 1686 aa23.11■■□□□ 1.29
ITGAM-204ENST00000565142 EP400Q96L91 3159 aa23.11■■□□□ 1.29
ITGAM-204ENST00000565142 LMO7Q8WWI1 1683 aa23.1■■□□□ 1.29
ITGAM-204ENST00000565142 SRPK2P78362 688 aaKnown RBP23.1■■□□□ 1.29
ITGAM-204ENST00000565142 ATAD2Q6PL18 1390 aa23.1■■□□□ 1.29
ITGAM-204ENST00000565142 CABP2Q9NPB3 220 aa23.09■■□□□ 1.29
ITGAM-204ENST00000565142 USP6P35125 1406 aa23.08■■□□□ 1.29
ITGAM-204ENST00000565142 MON2Q7Z3U7 1717 aa23.08■■□□□ 1.29
ITGAM-204ENST00000565142 PAK3O75914 559 aaPredicted RBP23.08■■□□□ 1.29
ITGAM-204ENST00000565142 FAM83GA6ND36 823 aa23.07■■□□□ 1.28
ITGAM-204ENST00000565142 VPS72Q15906 364 aa23.07■■□□□ 1.28
ITGAM-204ENST00000565142 THSD7AQ9UPZ6 1657 aa23.06■■□□□ 1.28
ITGAM-204ENST00000565142 BRD4O60885 1362 aaPredicted RBP23.06■■□□□ 1.28
ITGAM-204ENST00000565142 SLIT3O75094 1523 aa23.06■■□□□ 1.28
ITGAM-204ENST00000565142 SSH2Q76I76 1423 aa23.06■■□□□ 1.28
ITGAM-204ENST00000565142 USP19O94966 1318 aa23.06■■□□□ 1.28
ITGAM-204ENST00000565142 EVC2Q86UK5 1308 aa23.06■■□□□ 1.28
ITGAM-204ENST00000565142 KIAA0232Q92628 1395 aa23.03■■□□□ 1.28
ITGAM-204ENST00000565142 USP54Q70EL1 1684 aa23.03■■□□□ 1.28
ITGAM-204ENST00000565142 BTG4Q9NY30 223 aa23■■□□□ 1.27
ITGAM-204ENST00000565142 CPDO75976 1380 aa23■■□□□ 1.27
ITGAM-204ENST00000565142 NUTM2GQ5VZR2 741 aa22.99■■□□□ 1.27
ITGAM-204ENST00000565142 CARD11Q9BXL7 1154 aa22.99■■□□□ 1.27
ITGAM-204ENST00000565142 PRDM11Q9NQV5 511 aa22.99■■□□□ 1.27
ITGAM-204ENST00000565142 CABP1Q9NZU7 370 aa22.99■■□□□ 1.27
ITGAM-204ENST00000565142 CPSF1Q10570 1443 aaKnown RBP22.99■■□□□ 1.27
ITGAM-204ENST00000565142 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
ITGAM-204ENST00000565142 CD163L1Q9NR16 1453 aa22.97■■□□□ 1.27
ITGAM-204ENST00000565142 ONECUT3O60422 494 aaPredicted RBP22.96■■□□□ 1.27
ITGAM-204ENST00000565142 COL18A1P39060 1754 aa22.95■■□□□ 1.26
ITGAM-204ENST00000565142 ABTB2Q8N961 1025 aa22.95■■□□□ 1.26
ITGAM-204ENST00000565142 SPATA31A5Q5VU36 1347 aa22.94■■□□□ 1.26
ITGAM-204ENST00000565142 SPATA31A7Q8IWB4 1347 aa22.94■■□□□ 1.26
ITGAM-204ENST00000565142 SEPT12Q8IYM1 358 aa22.94■■□□□ 1.26
ITGAM-204ENST00000565142 CHRNA2Q15822 529 aa22.93■■□□□ 1.26
ITGAM-204ENST00000565142 CCDC9Q9Y3X0 531 aaKnown RBP22.93■■□□□ 1.26
ITGAM-204ENST00000565142 NFAT5O94916 1531 aa22.92■■□□□ 1.26
ITGAM-204ENST00000565142 WNK3Q9BYP7 1800 aa22.92■■□□□ 1.26
ITGAM-204ENST00000565142 ZC3H6P61129 1189 aaKnown RBP22.92■■□□□ 1.26
ITGAM-204ENST00000565142 COL5A2P05997 1499 aaPredicted RBP22.92■■□□□ 1.26
ITGAM-204ENST00000565142 NLRP13Q86W25 1043 aa22.9■■□□□ 1.26
ITGAM-204ENST00000565142 BLMP54132 1417 aaPredicted RBP22.9■■□□□ 1.26
ITGAM-204ENST00000565142 TNS1Q9HBL0 1735 aaKnown RBP22.89■■□□□ 1.26
ITGAM-204ENST00000565142 FAM98CQ17RN3 349 aaKnown RBP22.89■■□□□ 1.25
ITGAM-204ENST00000565142 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
ITGAM-204ENST00000565142 SPATA31A1Q5TZJ5 1347 aa22.88■■□□□ 1.25
ITGAM-204ENST00000565142 GCP02774 474 aa22.88■■□□□ 1.25
ITGAM-204ENST00000565142 PARP4Q9UKK3 1724 aaKnown RBP22.88■■□□□ 1.25
ITGAM-204ENST00000565142 KTN1Q86UP2 1357 aaKnown RBP22.88■■□□□ 1.25
ITGAM-204ENST00000565142 ABCC6O95255 1503 aa22.87■■□□□ 1.25
ITGAM-204ENST00000565142 TTC21BQ7Z4L5 1316 aa22.87■■□□□ 1.25
ITGAM-204ENST00000565142 PCGF6Q9BYE7 350 aa22.87■■□□□ 1.25
ITGAM-204ENST00000565142 TTC21AQ8NDW8 1320 aa22.86■■□□□ 1.25
ITGAM-204ENST00000565142 TESK2Q96S53 571 aa22.86■■□□□ 1.25
ITGAM-204ENST00000565142 RGPD5Q99666 1765 aa22.86■■□□□ 1.25
ITGAM-204ENST00000565142 ZNF692Q9BU19 519 aaPredicted RBP22.85■■□□□ 1.25
ITGAM-204ENST00000565142 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
ITGAM-204ENST00000565142 NLRP6P59044 892 aa22.84■■□□□ 1.25
ITGAM-204ENST00000565142 KRT27Q7Z3Y8 459 aa22.84■■□□□ 1.25
ITGAM-204ENST00000565142 AATKQ6ZMQ8 1374 aa22.84■■□□□ 1.25
ITGAM-204ENST00000565142 LTN1O94822 1766 aa22.84■■□□□ 1.25
ITGAM-204ENST00000565142 LRRC37A3O60309 1634 aa22.83■■□□□ 1.25
ITGAM-204ENST00000565142 CCDC125Q86Z20 511 aa22.83■■□□□ 1.25
ITGAM-204ENST00000565142 STRN4Q9NRL3 753 aa22.83■■□□□ 1.25
ITGAM-204ENST00000565142 EDC4Q6P2E9 1401 aaKnown RBP22.82■■□□□ 1.24
ITGAM-204ENST00000565142 A0A1W2PP64 1363 aa22.82■■□□□ 1.24
ITGAM-204ENST00000565142 USP47Q96K76 1375 aa22.82■■□□□ 1.24
ITGAM-204ENST00000565142 USP31Q70CQ4 1352 aa22.81■■□□□ 1.24
ITGAM-204ENST00000565142 PUS7Q96PZ0 661 aaKnown RBP22.81■■□□□ 1.24
ITGAM-204ENST00000565142 MYOM1P52179 1685 aa22.81■■□□□ 1.24
ITGAM-204ENST00000565142 NINLQ9Y2I6 1382 aa22.8■■□□□ 1.24
ITGAM-204ENST00000565142 ST20-MTHFSA0A0A6YYL1 179 aa22.8■■□□□ 1.24
ITGAM-204ENST00000565142 A0A0G2JS52 829 aa22.8■■□□□ 1.24
ITGAM-204ENST00000565142 MYT1Q01538 1121 aa22.8■■□□□ 1.24
ITGAM-204ENST00000565142 CRB1P82279 1406 aa22.8■■□□□ 1.24
ITGAM-204ENST00000565142 LARP1Q6PKG0 1096 aaKnown RBP22.79■■□□□ 1.24
ITGAM-204ENST00000565142 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
ITGAM-204ENST00000565142 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
ITGAM-204ENST00000565142 PEAK1Q9H792 1746 aa22.77■■□□□ 1.24
ITGAM-204ENST00000565142 BARGINQ6ZT62 677 aa22.77■■□□□ 1.24
ITGAM-204ENST00000565142 SLC12A5Q9H2X9 1139 aa22.75■■□□□ 1.23
ITGAM-204ENST00000565142 DISP2A7MBM2 1401 aa22.74■■□□□ 1.23
ITGAM-204ENST00000565142 ARHGEF25Q86VW2 580 aa22.74■■□□□ 1.23
ITGAM-204ENST00000565142 KCNH5Q8NCM2 988 aa22.74■■□□□ 1.23
ITGAM-204ENST00000565142 TMC1Q8TDI8 760 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms