RNA–Protein interactions for RNA: ENST00000564850.1

RBFOX1-216, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 293 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-216ENST00000564850 ZIC2O95409 532 aaPredicted RBP8.52□□□□□ -1.05
RBFOX1-216ENST00000564850 ITGB2P05107 769 aa8.52□□□□□ -1.05
RBFOX1-216ENST00000564850 HIC1Q14526 733 aa8.52□□□□□ -1.05
RBFOX1-216ENST00000564850 MPNDQ8N594 471 aa8.52□□□□□ -1.05
RBFOX1-216ENST00000564850 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
RBFOX1-216ENST00000564850 NANOS1Q8WY41 292 aaKnown RBP8.51□□□□□ -1.05
RBFOX1-216ENST00000564850 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
RBFOX1-216ENST00000564850 SOS2Q07890 1332 aaPredicted RBP8.51□□□□□ -1.05
RBFOX1-216ENST00000564850 BTBD11A6QL63 1104 aa8.5□□□□□ -1.05
RBFOX1-216ENST00000564850 PHF20L1A8MW92 1017 aa8.5□□□□□ -1.05
RBFOX1-216ENST00000564850 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
RBFOX1-216ENST00000564850 LINC00528Q8N1L1 170 aa8.5□□□□□ -1.05
RBFOX1-216ENST00000564850 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
RBFOX1-216ENST00000564850 PTSQ03393 145 aa8.48□□□□□ -1.05
RBFOX1-216ENST00000564850 KRTAP4-12Q9BQ66 201 aa8.48□□□□□ -1.05
RBFOX1-216ENST00000564850 ARHGEF1Q92888 912 aaKnown RBP8.47□□□□□ -1.05
RBFOX1-216ENST00000564850 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
RBFOX1-216ENST00000564850 KDM4AO75164 1064 aa8.46□□□□□ -1.06
RBFOX1-216ENST00000564850 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.06
RBFOX1-216ENST00000564850 HLA-CQ95604 372 aa8.46□□□□□ -1.06
RBFOX1-216ENST00000564850 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
RBFOX1-216ENST00000564850 ADAMTS2O95450 1211 aa8.45□□□□□ -1.06
RBFOX1-216ENST00000564850 BBXQ8WY36 941 aaPredicted RBP8.45□□□□□ -1.06
RBFOX1-216ENST00000564850 BAP1Q92560 729 aa8.45□□□□□ -1.06
RBFOX1-216ENST00000564850 CDC14CA4D256 554 aa8.44□□□□□ -1.06
RBFOX1-216ENST00000564850 CCNYL3P0C7X3 344 aa8.44□□□□□ -1.06
RBFOX1-216ENST00000564850 BAG6P46379 1132 aa8.44□□□□□ -1.06
RBFOX1-216ENST00000564850 MEIOBQ8N635 442 aa8.44□□□□□ -1.06
RBFOX1-216ENST00000564850 CCDC155Q8N6L0 562 aa8.44□□□□□ -1.06
RBFOX1-216ENST00000564850 UNC93B1Q9H1C4 597 aa8.44□□□□□ -1.06
RBFOX1-216ENST00000564850 CNTNAP5Q8WYK1 1306 aa8.44□□□□□ -1.06
RBFOX1-216ENST00000564850 USP46P62068 366 aa8.43□□□□□ -1.06
RBFOX1-216ENST00000564850 PODNQ7Z5L7 613 aa8.43□□□□□ -1.06
RBFOX1-216ENST00000564850 ZNF511Q8NB15 262 aa8.43□□□□□ -1.06
RBFOX1-216ENST00000564850 SPRYD3Q8NCJ5 442 aa8.43□□□□□ -1.06
RBFOX1-216ENST00000564850 KRTAP9-9Q9BYP9 154 aa8.43□□□□□ -1.06
RBFOX1-216ENST00000564850 KRTAP9-4Q9BYQ2 154 aa8.43□□□□□ -1.06
RBFOX1-216ENST00000564850 SV2AQ7L0J3 742 aa8.42□□□□□ -1.06
RBFOX1-216ENST00000564850 VWA5B2Q8N398 1253 aa8.42□□□□□ -1.06
RBFOX1-216ENST00000564850 FAM174AQ8TBP5 190 aa8.42□□□□□ -1.06
RBFOX1-216ENST00000564850 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
RBFOX1-216ENST00000564850 CELA2BP08218 269 aaPredicted RBP8.41□□□□□ -1.06
RBFOX1-216ENST00000564850 FURINP09958 794 aa8.41□□□□□ -1.06
RBFOX1-216ENST00000564850 CD46P15529 392 aa8.41□□□□□ -1.06
RBFOX1-216ENST00000564850 ARID5BQ14865 1188 aa8.41□□□□□ -1.06
RBFOX1-216ENST00000564850 BEND7Q8N7W2 519 aaPredicted RBP8.41□□□□□ -1.06
RBFOX1-216ENST00000564850 PHOX2BQ99453 314 aa8.41□□□□□ -1.06
RBFOX1-216ENST00000564850 GNPATO15228 680 aa8.4□□□□□ -1.06
RBFOX1-216ENST00000564850 MS4A1P11836 297 aa8.4□□□□□ -1.06
RBFOX1-216ENST00000564850 RETREG3Q86VR2 466 aa8.4□□□□□ -1.06
RBFOX1-216ENST00000564850 SYMPKQ92797 1274 aaKnown RBP8.4□□□□□ -1.06
RBFOX1-216ENST00000564850 ITGA6P23229 1130 aa8.39□□□□□ -1.07
RBFOX1-216ENST00000564850 KRTAP4-8A0A0G2JLE6 195 aa8.38□□□□□ -1.07
RBFOX1-216ENST00000564850 HOXA2O43364 376 aa8.38□□□□□ -1.07
RBFOX1-216ENST00000564850 GUCA2AQ02747 115 aa8.38□□□□□ -1.07
RBFOX1-216ENST00000564850 TSEN34Q9BSV6 310 aaKnown RBP8.38□□□□□ -1.07
RBFOX1-216ENST00000564850 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
RBFOX1-216ENST00000564850 SPTLC1O15269 473 aa8.37□□□□□ -1.07
RBFOX1-216ENST00000564850 NR3C2P08235 984 aa8.37□□□□□ -1.07
RBFOX1-216ENST00000564850 SRSF11Q05519 484 aaKnown RBP8.37□□□□□ -1.07
RBFOX1-216ENST00000564850 NR5A1Q13285 461 aa8.37□□□□□ -1.07
RBFOX1-216ENST00000564850 CDK15Q96Q40 435 aa8.37□□□□□ -1.07
RBFOX1-216ENST00000564850 SLC35F4A4IF30 521 aa8.35□□□□□ -1.07
RBFOX1-216ENST00000564850 PTPRNQ16849 979 aa8.35□□□□□ -1.07
RBFOX1-216ENST00000564850 SH3RF1Q7Z6J0 888 aa8.35□□□□□ -1.07
RBFOX1-216ENST00000564850 EVA1BQ9NVM1 165 aa8.35□□□□□ -1.07
RBFOX1-216ENST00000564850 NEDD1Q8NHV4 660 aa8.34□□□□□ -1.07
RBFOX1-216ENST00000564850 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
RBFOX1-216ENST00000564850 KCNV2Q8TDN2 545 aa8.31□□□□□ -1.08
RBFOX1-216ENST00000564850 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
RBFOX1-216ENST00000564850 KRBA1A5PL33 1030 aa8.27□□□□□ -1.09
RBFOX1-216ENST00000564850 GRM5P41594 1212 aa8.27□□□□□ -1.09
RBFOX1-216ENST00000564850 GAS6Q14393 721 aa8.27□□□□□ -1.09
RBFOX1-216ENST00000564850 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.27□□□□□ -1.09
RBFOX1-216ENST00000564850 FOXJ1Q92949 421 aa8.26□□□□□ -1.09
RBFOX1-216ENST00000564850 GPR37O15354 613 aa8.25□□□□□ -1.09
RBFOX1-216ENST00000564850 BCRP11274 1271 aa8.25□□□□□ -1.09
RBFOX1-216ENST00000564850 ZMYM1Q5SVZ6 1142 aa8.25□□□□□ -1.09
RBFOX1-216ENST00000564850 RBM26Q5T8P6 1007 aaKnown RBP8.25□□□□□ -1.09
RBFOX1-216ENST00000564850 SEMA3EO15041 775 aa8.24□□□□□ -1.09
RBFOX1-216ENST00000564850 FSHRP23945 695 aa8.23□□□□□ -1.09
RBFOX1-216ENST00000564850 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
RBFOX1-216ENST00000564850 SPINT1O43278 529 aa8.22□□□□□ -1.09
RBFOX1-216ENST00000564850 AGERQ15109 404 aa8.22□□□□□ -1.09
RBFOX1-216ENST00000564850 ALYREFQ86V81 257 aaKnown RBP8.22□□□□□ -1.09
RBFOX1-216ENST00000564850 CFAP44Q96MT7 982 aa8.22□□□□□ -1.09
RBFOX1-216ENST00000564850 SCO2A0A1W2PP80 73 aa8.21□□□□□ -1.1
RBFOX1-216ENST00000564850 FDX1P10109 184 aa8.21□□□□□ -1.1
RBFOX1-216ENST00000564850 CTHP32929 405 aa8.21□□□□□ -1.1
RBFOX1-216ENST00000564850 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
RBFOX1-216ENST00000564850 MBIPQ9NS73 344 aa8.21□□□□□ -1.1
RBFOX1-216ENST00000564850 IGF1RP08069 1367 aa8.21□□□□□ -1.1
RBFOX1-216ENST00000564850 NUTM1Q86Y26 1132 aa8.2□□□□□ -1.1
RBFOX1-216ENST00000564850 PCDHGC3Q9UN70 934 aa8.19□□□□□ -1.1
RBFOX1-216ENST00000564850 PAXIP1Q6ZW49 1069 aaPredicted RBP8.18□□□□□ -1.1
RBFOX1-216ENST00000564850 CCDC116Q8IYX3 515 aa8.18□□□□□ -1.1
RBFOX1-216ENST00000564850 GOLGA2P5Q9HBQ8 144 aa8.18□□□□□ -1.1
RBFOX1-216ENST00000564850 SENP3-EIF4A1A0A087X0R7 540 aa8.17□□□□□ -1.1
RBFOX1-216ENST00000564850 ITGB7P26010 798 aa8.17□□□□□ -1.1
RBFOX1-216ENST00000564850 PRR7Q8TB68 274 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms