RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 ADH1BP00325 375 aa9.12□□□□□ -0.95
CDH1-207ENST00000564745 CCNYL3P0C7X3 344 aa9.12□□□□□ -0.95
CDH1-207ENST00000564745 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
CDH1-207ENST00000564745 NKX2-3Q8TAU0 364 aa9.12□□□□□ -0.95
CDH1-207ENST00000564745 NUDT12Q9BQG2 462 aa9.12□□□□□ -0.95
CDH1-207ENST00000564745 ALG2Q9H553 416 aa9.12□□□□□ -0.95
CDH1-207ENST00000564745 FKBPLQ9UIM3 349 aa9.12□□□□□ -0.95
CDH1-207ENST00000564745 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
CDH1-207ENST00000564745 EVA1BQ9NVM1 165 aa9.11□□□□□ -0.95
CDH1-207ENST00000564745 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
CDH1-207ENST00000564745 KCNH2Q12809 1159 aa9.09□□□□□ -0.95
CDH1-207ENST00000564745 IL21Q9HBE4 155 aa9.09□□□□□ -0.95
CDH1-207ENST00000564745 UCN2Q96RP3 112 aa9.08□□□□□ -0.96
CDH1-207ENST00000564745 ZBBXA8MT70 800 aa9.07□□□□□ -0.96
CDH1-207ENST00000564745 NR1H3Q13133 447 aa9.07□□□□□ -0.96
CDH1-207ENST00000564745 CCDC24Q8N4L8 307 aa9.07□□□□□ -0.96
CDH1-207ENST00000564745 OCSTAMPQ9BR26 566 aa9.07□□□□□ -0.96
CDH1-207ENST00000564745 SLC6A16Q9GZN6 736 aa9.07□□□□□ -0.96
CDH1-207ENST00000564745 S1PR4O95977 384 aa9.06□□□□□ -0.96
CDH1-207ENST00000564745 RFX1P22670 979 aa9.06□□□□□ -0.96
CDH1-207ENST00000564745 CFAP70Q5T0N1 1121 aa9.06□□□□□ -0.96
CDH1-207ENST00000564745 PNMA1Q8ND90 353 aa9.06□□□□□ -0.96
CDH1-207ENST00000564745 SEMA3FQ13275 785 aa9.05□□□□□ -0.96
CDH1-207ENST00000564745 PPP1R12CQ9BZL4 782 aa9.05□□□□□ -0.96
CDH1-207ENST00000564745 UNC93B1Q9H1C4 597 aa9.04□□□□□ -0.96
CDH1-207ENST00000564745 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
CDH1-207ENST00000564745 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.03□□□□□ -0.96
CDH1-207ENST00000564745 PALM3A6NDB9 673 aaPredicted RBP9.03□□□□□ -0.96
CDH1-207ENST00000564745 EIF4G2P78344 907 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDH1-207ENST00000564745 TFIP11Q9UBB9 837 aaKnown RBP9.03□□□□□ -0.96
CDH1-207ENST00000564745 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
CDH1-207ENST00000564745 PIK3CDO00329 1044 aa9.02□□□□□ -0.97
CDH1-207ENST00000564745 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
CDH1-207ENST00000564745 SOX11P35716 441 aa9.02□□□□□ -0.97
CDH1-207ENST00000564745 TBC1D9Q6ZT07 1266 aa9.02□□□□□ -0.97
CDH1-207ENST00000564745 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
CDH1-207ENST00000564745 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
CDH1-207ENST00000564745 LMOD1P29536 600 aaPredicted RBP9□□□□□ -0.97
CDH1-207ENST00000564745 SRPK2P78362 688 aaKnown RBP9□□□□□ -0.97
CDH1-207ENST00000564745 RETREG2Q8NC44 543 aa9□□□□□ -0.97
CDH1-207ENST00000564745 ARMC2Q8NEN0 867 aa9□□□□□ -0.97
CDH1-207ENST00000564745 PTK2Q05397 1052 aa8.99□□□□□ -0.97
CDH1-207ENST00000564745 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
CDH1-207ENST00000564745 CDCA8Q53HL2 280 aa8.99□□□□□ -0.97
CDH1-207ENST00000564745 BAP1Q92560 729 aa8.99□□□□□ -0.97
CDH1-207ENST00000564745 NBPF14Q5TI25 921 aa8.98□□□□□ -0.97
CDH1-207ENST00000564745 SH3BP5LQ7L8J4 393 aa8.98□□□□□ -0.97
CDH1-207ENST00000564745 ADAM32Q8TC27 787 aa8.98□□□□□ -0.97
CDH1-207ENST00000564745 MAFBQ9Y5Q3 323 aaPredicted RBP8.98□□□□□ -0.97
CDH1-207ENST00000564745 FAM174AQ8TBP5 190 aa8.97□□□□□ -0.97
CDH1-207ENST00000564745 GPKOWQ92917 476 aaPredicted RBP eCLIP8.97□□□□□ -0.97
CDH1-207ENST00000564745 FOXJ1Q92949 421 aa8.97□□□□□ -0.97
CDH1-207ENST00000564745 PBXIP1Q96AQ6 731 aa8.97□□□□□ -0.97
CDH1-207ENST00000564745 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
CDH1-207ENST00000564745 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
CDH1-207ENST00000564745 GPSM3Q9Y4H4 160 aa8.97□□□□□ -0.97
CDH1-207ENST00000564745 PCDHB9Q9Y5E1 797 aa8.97□□□□□ -0.97
CDH1-207ENST00000564745 PPP1R15AO75807 674 aaPredicted RBP8.96□□□□□ -0.98
CDH1-207ENST00000564745 PDIA4P13667 645 aaKnown RBP8.96□□□□□ -0.98
CDH1-207ENST00000564745 KCNC4Q03721 635 aa8.96□□□□□ -0.98
CDH1-207ENST00000564745 TRIM26Q12899 539 aaPredicted RBP8.96□□□□□ -0.98
CDH1-207ENST00000564745 C4orf48Q5BLP8 95 aa8.96□□□□□ -0.98
CDH1-207ENST00000564745 PLA2G2CQ5R387 149 aa8.96□□□□□ -0.98
CDH1-207ENST00000564745 CEP126Q9P2H0 1117 aa8.96□□□□□ -0.98
CDH1-207ENST00000564745 MAGEB6P1A0A0J9YX57 407 aa8.95□□□□□ -0.98
CDH1-207ENST00000564745 ATP9BO43861 1147 aa8.95□□□□□ -0.98
CDH1-207ENST00000564745 ITGBL1O95965 494 aaPredicted RBP8.95□□□□□ -0.98
CDH1-207ENST00000564745 RNF223E7ERA6 249 aa8.94□□□□□ -0.98
CDH1-207ENST00000564745 SH3RF1Q7Z6J0 888 aa8.94□□□□□ -0.98
CDH1-207ENST00000564745 ZBTB33Q86T24 672 aa8.94□□□□□ -0.98
CDH1-207ENST00000564745 ZNF511Q8NB15 262 aa8.94□□□□□ -0.98
CDH1-207ENST00000564745 CARNS1A5YM72 827 aa8.93□□□□□ -0.98
CDH1-207ENST00000564745 SKIP12755 728 aa8.93□□□□□ -0.98
CDH1-207ENST00000564745 DEPDC4Q8N2C3 294 aa8.93□□□□□ -0.98
CDH1-207ENST00000564745 ACIN1Q9UKV3 1341 aaKnown RBP8.92□□□□□ -0.98
CDH1-207ENST00000564745 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
CDH1-207ENST00000564745 PHTF2Q8N3S3 785 aa8.92□□□□□ -0.98
CDH1-207ENST00000564745 SH3BP2P78314 561 aa8.91□□□□□ -0.98
CDH1-207ENST00000564745 AGERQ15109 404 aa8.91□□□□□ -0.98
CDH1-207ENST00000564745 ERFEQ4G0M1 354 aa8.91□□□□□ -0.98
CDH1-207ENST00000564745 USP17L3A6NCW0 530 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 USP17L4A6NCW7 530 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 SLFNL1Q499Z3 407 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
CDH1-207ENST00000564745 PPP1R18Q6NYC8 613 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 USP17L2Q6R6M4 530 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 USP17L1Q7RTZ2 530 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 DZIP3Q86Y13 1208 aaKnown RBP8.9□□□□□ -0.98
CDH1-207ENST00000564745 TRAIPQ9BWF2 469 aa8.9□□□□□ -0.98
CDH1-207ENST00000564745 BPHLQ86WA6 291 aaPredicted RBP8.89□□□□□ -0.99
CDH1-207ENST00000564745 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
CDH1-207ENST00000564745 NFATC2IPQ8NCF5 419 aa8.89□□□□□ -0.99
CDH1-207ENST00000564745 GIGYF1O75420 1035 aaPredicted RBP8.88□□□□□ -0.99
CDH1-207ENST00000564745 SKOR1P84550 965 aa8.88□□□□□ -0.99
CDH1-207ENST00000564745 TRIM32Q13049 653 aa8.88□□□□□ -0.99
CDH1-207ENST00000564745 ANKLE1Q8NAG6 615 aa8.88□□□□□ -0.99
CDH1-207ENST00000564745 PLPP7Q8NBV4 271 aa8.87□□□□□ -0.99
CDH1-207ENST00000564745 CCDC85AQ96PX6 553 aaPredicted RBP8.87□□□□□ -0.99
CDH1-207ENST00000564745 C1QTNF2Q9BXJ5 285 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms