RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 BTG4Q9NY30 223 aa15.66■□□□□ 0.1
SF3B3-204ENST00000563739 LMO7Q8WWI1 1683 aa15.66■□□□□ 0.1
SF3B3-204ENST00000563739 ATP7BP35670 1465 aa15.65■□□□□ 0.1
SF3B3-204ENST00000563739 R3HDM1Q15032 1099 aaKnown RBP15.65■□□□□ 0.1
SF3B3-204ENST00000563739 CCDC9Q9Y3X0 531 aaKnown RBP15.65■□□□□ 0.1
SF3B3-204ENST00000563739 NRKQ7Z2Y5 1582 aa15.65■□□□□ 0.1
SF3B3-204ENST00000563739 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
SF3B3-204ENST00000563739 PSME1Q06323 249 aa15.64■□□□□ 0.09
SF3B3-204ENST00000563739 SAFB2Q14151 953 aaKnown RBP eCLIP15.64■□□□□ 0.09
SF3B3-204ENST00000563739 ITSN1Q15811 1721 aa15.64■□□□□ 0.09
SF3B3-204ENST00000563739 MPHOSPH9Q99550 1183 aa15.64■□□□□ 0.09
SF3B3-204ENST00000563739 EZH2Q15910 746 aaKnown RBP15.63■□□□□ 0.09
SF3B3-204ENST00000563739 CAMKK2Q96RR4 588 aa15.63■□□□□ 0.09
SF3B3-204ENST00000563739 PEAK1Q9H792 1746 aa15.63■□□□□ 0.09
SF3B3-204ENST00000563739 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
SF3B3-204ENST00000563739 HAP1P54257 671 aaPredicted RBP15.62■□□□□ 0.09
SF3B3-204ENST00000563739 LMOD2Q6P5Q4 547 aa15.61■□□□□ 0.09
SF3B3-204ENST00000563739 SPATA31A1Q5TZJ5 1347 aa15.6■□□□□ 0.09
SF3B3-204ENST00000563739 CAMTA1Q9Y6Y1 1673 aa15.6■□□□□ 0.09
SF3B3-204ENST00000563739 PARP4Q9UKK3 1724 aaKnown RBP15.6■□□□□ 0.09
SF3B3-204ENST00000563739 CASZ1Q86V15 1759 aa15.59■□□□□ 0.09
SF3B3-204ENST00000563739 KIAA0232Q92628 1395 aa15.59■□□□□ 0.09
SF3B3-204ENST00000563739 HIRIP3Q9BW71 556 aaPredicted RBP15.58■□□□□ 0.08
SF3B3-204ENST00000563739 SBF2Q86WG5 1849 aa15.58■□□□□ 0.08
SF3B3-204ENST00000563739 RGPD3A6NKT7 1758 aaPredicted RBP15.57■□□□□ 0.08
SF3B3-204ENST00000563739 RGPD4Q7Z3J3 1758 aa15.57■□□□□ 0.08
SF3B3-204ENST00000563739 A0A0G2JS52 829 aa15.57■□□□□ 0.08
SF3B3-204ENST00000563739 MYT1Q01538 1121 aa15.57■□□□□ 0.08
SF3B3-204ENST00000563739 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
SF3B3-204ENST00000563739 SSH2Q76I76 1423 aa15.56■□□□□ 0.08
SF3B3-204ENST00000563739 LRRC37A3O60309 1634 aa15.55■□□□□ 0.08
SF3B3-204ENST00000563739 PARD3Q8TEW0 1356 aa15.55■□□□□ 0.08
SF3B3-204ENST00000563739 MINK1Q8N4C8 1332 aaPredicted RBP15.55■□□□□ 0.08
SF3B3-204ENST00000563739 TRIM37O94972 964 aa15.54■□□□□ 0.08
SF3B3-204ENST00000563739 CHRNA2Q15822 529 aa15.54■□□□□ 0.08
SF3B3-204ENST00000563739 GPRASP1Q5JY77 1395 aa15.53■□□□□ 0.08
SF3B3-204ENST00000563739 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
SF3B3-204ENST00000563739 TRAK1Q9UPV9 953 aa15.53■□□□□ 0.08
SF3B3-204ENST00000563739 YY1P25490 414 aa15.52■□□□□ 0.08
SF3B3-204ENST00000563739 PRDM11Q9NQV5 511 aa15.52■□□□□ 0.08
SF3B3-204ENST00000563739 POLR3AO14802 1390 aaPredicted RBP15.51■□□□□ 0.07
SF3B3-204ENST00000563739 EIF3AQ14152 1382 aaKnown RBP15.51■□□□□ 0.07
SF3B3-204ENST00000563739 COL18A1P39060 1754 aa15.51■□□□□ 0.07
SF3B3-204ENST00000563739 POGKQ9P215 609 aa15.5■□□□□ 0.07
SF3B3-204ENST00000563739 MYOM1P52179 1685 aa15.5■□□□□ 0.07
SF3B3-204ENST00000563739 UTRNP46939 3433 aa15.5■□□□□ 0.07
SF3B3-204ENST00000563739 USP19O94966 1318 aa15.49■□□□□ 0.07
SF3B3-204ENST00000563739 COL5A2P05997 1499 aaPredicted RBP15.48■□□□□ 0.07
SF3B3-204ENST00000563739 FAM196AQ6ZSG2 479 aa15.48■□□□□ 0.07
SF3B3-204ENST00000563739 BARGINQ6ZT62 677 aa15.48■□□□□ 0.07
SF3B3-204ENST00000563739 CPDO75976 1380 aa15.48■□□□□ 0.07
SF3B3-204ENST00000563739 APBA3O96018 575 aa15.47■□□□□ 0.07
SF3B3-204ENST00000563739 STRN4Q9NRL3 753 aa15.47■□□□□ 0.07
SF3B3-204ENST00000563739 ZC3H6P61129 1189 aaKnown RBP15.46■□□□□ 0.07
SF3B3-204ENST00000563739 LARP1Q6PKG0 1096 aaKnown RBP15.46■□□□□ 0.07
SF3B3-204ENST00000563739 ANO8Q9HCE9 1232 aaPredicted RBP15.46■□□□□ 0.07
SF3B3-204ENST00000563739 SLIT3O75094 1523 aa15.46■□□□□ 0.07
SF3B3-204ENST00000563739 KIAA1210Q9ULL0 1709 aa15.46■□□□□ 0.06
SF3B3-204ENST00000563739 NUTM2GQ5VZR2 741 aa15.45■□□□□ 0.06
SF3B3-204ENST00000563739 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
SF3B3-204ENST00000563739 NUDT16Q96DE0 195 aaKnown RBP15.45■□□□□ 0.06
SF3B3-204ENST00000563739 PIK3C2AO00443 1686 aa15.44■□□□□ 0.06
SF3B3-204ENST00000563739 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
SF3B3-204ENST00000563739 PTF1AQ7RTS3 328 aa15.44■□□□□ 0.06
SF3B3-204ENST00000563739 RAB3GAP2Q9H2M9 1393 aa15.44■□□□□ 0.06
SF3B3-204ENST00000563739 NINLQ9Y2I6 1382 aa15.44■□□□□ 0.06
SF3B3-204ENST00000563739 USP35Q9P2H5 1018 aa15.43■□□□□ 0.06
SF3B3-204ENST00000563739 AKAP12Q02952 1782 aa15.42■□□□□ 0.06
SF3B3-204ENST00000563739 RGPD5Q99666 1765 aa15.42■□□□□ 0.06
SF3B3-204ENST00000563739 PDGFDQ9GZP0 370 aaPredicted RBP15.42■□□□□ 0.06
SF3B3-204ENST00000563739 ACEP12821 1306 aa15.42■□□□□ 0.06
SF3B3-204ENST00000563739 PAPPAQ13219 1627 aa15.41■□□□□ 0.06
SF3B3-204ENST00000563739 OVOS2A0A0G2JMS6 1433 aa15.4■□□□□ 0.06
SF3B3-204ENST00000563739 OVOS2A0A0J9YW53 1432 aa15.4■□□□□ 0.06
SF3B3-204ENST00000563739 OVOS2Q6IE36 1432 aa15.4■□□□□ 0.06
SF3B3-204ENST00000563739 PLEKHG3A1L390 1219 aa15.39■□□□□ 0.05
SF3B3-204ENST00000563739 KCNQ2O43526 872 aa15.39■□□□□ 0.05
SF3B3-204ENST00000563739 NBPF8Q3BBV2 869 aa15.39■□□□□ 0.05
SF3B3-204ENST00000563739 TCP11L2Q8N4U5 519 aa15.39■□□□□ 0.05
SF3B3-204ENST00000563739 CRB1P82279 1406 aa15.39■□□□□ 0.05
SF3B3-204ENST00000563739 QRICH2Q9H0J4 1663 aa15.38■□□□□ 0.05
SF3B3-204ENST00000563739 CEP350Q5VT06 3117 aa15.38■□□□□ 0.05
SF3B3-204ENST00000563739 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
SF3B3-204ENST00000563739 CDK19Q9BWU1 502 aa15.38■□□□□ 0.05
SF3B3-204ENST00000563739 PROM2Q8N271 834 aa15.37■□□□□ 0.05
SF3B3-204ENST00000563739 DCAF11Q8TEB1 546 aa15.37■□□□□ 0.05
SF3B3-204ENST00000563739 SPON1Q9HCB6 807 aa15.37■□□□□ 0.05
SF3B3-204ENST00000563739 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
SF3B3-204ENST00000563739 BCL9O00512 1426 aa15.36■□□□□ 0.05
SF3B3-204ENST00000563739 PTGER2P43116 358 aa15.36■□□□□ 0.05
SF3B3-204ENST00000563739 PDE3BQ13370 1112 aa15.36■□□□□ 0.05
SF3B3-204ENST00000563739 THRAP3Q9Y2W1 955 aaKnown RBP15.35■□□□□ 0.05
SF3B3-204ENST00000563739 NHSQ6T4R5 1651 aa15.35■□□□□ 0.05
SF3B3-204ENST00000563739 PPIP5K1Q6PFW1 1433 aa15.34■□□□□ 0.05
SF3B3-204ENST00000563739 GCP02774 474 aa15.34■□□□□ 0.05
SF3B3-204ENST00000563739 TRPM1Q7Z4N2 1603 aa15.34■□□□□ 0.05
SF3B3-204ENST00000563739 AATKQ6ZMQ8 1374 aa15.34■□□□□ 0.05
SF3B3-204ENST00000563739 COL24A1Q17RW2 1714 aa15.34■□□□□ 0.05
SF3B3-204ENST00000563739 USP6P35125 1406 aa15.34■□□□□ 0.05
SF3B3-204ENST00000563739 NFAT5O94916 1531 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms