RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 HRCP23327 699 aa8.99□□□□□ -0.97
CNOT1-205ENST00000563283 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
CNOT1-205ENST00000563283 DNMBPQ6XZF7 1577 aa8.99□□□□□ -0.97
CNOT1-205ENST00000563283 FAM187AA6NFU0 413 aa8.98□□□□□ -0.97
CNOT1-205ENST00000563283 PKDCCQ504Y2 493 aa8.98□□□□□ -0.97
CNOT1-205ENST00000563283 KDM4CQ9H3R0 1056 aa8.98□□□□□ -0.97
CNOT1-205ENST00000563283 GPBP1L1Q9HC44 474 aaPredicted RBP8.98□□□□□ -0.97
CNOT1-205ENST00000563283 TOR4AQ9NXH8 423 aa8.98□□□□□ -0.97
CNOT1-205ENST00000563283 CUX1P39880 1505 aa8.98□□□□□ -0.97
CNOT1-205ENST00000563283 CFAP99D6REC4 459 aa8.97□□□□□ -0.97
CNOT1-205ENST00000563283 WNT7BP56706 349 aa8.97□□□□□ -0.97
CNOT1-205ENST00000563283 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
CNOT1-205ENST00000563283 CABLES1Q8TDN4 633 aa8.97□□□□□ -0.97
CNOT1-205ENST00000563283 RSPH6AQ9H0K4 717 aa8.97□□□□□ -0.97
CNOT1-205ENST00000563283 TARBP1Q13395 1621 aaKnown RBP8.97□□□□□ -0.97
CNOT1-205ENST00000563283 ZNF608Q9ULD9 1512 aaPredicted RBP8.96□□□□□ -0.97
CNOT1-205ENST00000563283 CLK2P49760 499 aaKnown RBP8.96□□□□□ -0.98
CNOT1-205ENST00000563283 SKOR1P84550 965 aa8.96□□□□□ -0.98
CNOT1-205ENST00000563283 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.98
CNOT1-205ENST00000563283 CYP4X1Q8N118 509 aa8.96□□□□□ -0.98
CNOT1-205ENST00000563283 EVA1BQ9NVM1 165 aa8.96□□□□□ -0.98
CNOT1-205ENST00000563283 ABCC8Q09428 1581 aa8.95□□□□□ -0.98
CNOT1-205ENST00000563283 LILRB3O75022 631 aa8.95□□□□□ -0.98
CNOT1-205ENST00000563283 LYPD8Q6UX82 237 aa8.95□□□□□ -0.98
CNOT1-205ENST00000563283 POLA1P09884 1462 aaPredicted RBP8.95□□□□□ -0.98
CNOT1-205ENST00000563283 MYT1Q01538 1121 aa8.94□□□□□ -0.98
CNOT1-205ENST00000563283 KCNH2Q12809 1159 aa8.94□□□□□ -0.98
CNOT1-205ENST00000563283 QPCTQ16769 361 aa8.94□□□□□ -0.98
CNOT1-205ENST00000563283 DDRGK1Q96HY6 314 aa8.94□□□□□ -0.98
CNOT1-205ENST00000563283 RAD54L2Q9Y4B4 1467 aa8.94□□□□□ -0.98
CNOT1-205ENST00000563283 MRGPRX2Q96LB1 330 aa8.93□□□□□ -0.98
CNOT1-205ENST00000563283 UNC93B1Q9H1C4 597 aa8.93□□□□□ -0.98
CNOT1-205ENST00000563283 FGD5Q6ZNL6 1462 aa8.92□□□□□ -0.98
CNOT1-205ENST00000563283 IFT140Q96RY7 1462 aa8.92□□□□□ -0.98
CNOT1-205ENST00000563283 RC3H1Q5TC82 1133 aaKnown RBP8.92□□□□□ -0.98
CNOT1-205ENST00000563283 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
CNOT1-205ENST00000563283 FAM117AQ9C073 453 aa8.92□□□□□ -0.98
CNOT1-205ENST00000563283 SYNJ1O43426 1573 aa8.91□□□□□ -0.98
CNOT1-205ENST00000563283 TTC24A2A3L6 582 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-205ENST00000563283 NUTM2BA6NNL0 878 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-205ENST00000563283 NUTM2EB1AL46 878 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-205ENST00000563283 SH3D19Q5HYK7 790 aa8.91□□□□□ -0.98
CNOT1-205ENST00000563283 NUTM2DQ5VT03 806 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-205ENST00000563283 NUTM2AQ8IVF1 878 aaPredicted RBP8.91□□□□□ -0.98
CNOT1-205ENST00000563283 POLR3EQ9NVU0 708 aa8.91□□□□□ -0.98
CNOT1-205ENST00000563283 AQRO60306 1485 aaKnown RBP eCLIP8.9□□□□□ -0.983e-6■■■■■ 30.9
CNOT1-205ENST00000563283 PLEKHG3A1L390 1219 aa8.9□□□□□ -0.98
CNOT1-205ENST00000563283 F12P00748 615 aaPredicted RBP8.9□□□□□ -0.98
CNOT1-205ENST00000563283 AVPP01185 164 aa8.9□□□□□ -0.98
CNOT1-205ENST00000563283 SOGA1O94964 1423 aa8.89□□□□□ -0.99
CNOT1-205ENST00000563283 SH3BP2P78314 561 aa8.89□□□□□ -0.99
CNOT1-205ENST00000563283 SKIV2LQ15477 1246 aaKnown RBP8.89□□□□□ -0.99
CNOT1-205ENST00000563283 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
CNOT1-205ENST00000563283 CRIPAKQ8N1N5 446 aa8.89□□□□□ -0.99
CNOT1-205ENST00000563283 TOP2BQ02880 1626 aa8.88□□□□□ -0.99
CNOT1-205ENST00000563283 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
CNOT1-205ENST00000563283 EIF4G3O43432 1585 aaKnown RBP8.88□□□□□ -0.99
CNOT1-205ENST00000563283 SMPD1P17405 629 aa8.88□□□□□ -0.99
CNOT1-205ENST00000563283 CTHP32929 405 aa8.88□□□□□ -0.99
CNOT1-205ENST00000563283 WDR97A6NE52 1622 aa8.87□□□□□ -0.99
CNOT1-205ENST00000563283 PER1O15534 1290 aaPredicted RBP8.87□□□□□ -0.99
CNOT1-205ENST00000563283 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
CNOT1-205ENST00000563283 HELBQ8NG08 1087 aaPredicted RBP8.87□□□□□ -0.99
CNOT1-205ENST00000563283 BAP1Q92560 729 aa8.87□□□□□ -0.99
CNOT1-205ENST00000563283 TSC1Q92574 1164 aa8.87□□□□□ -0.99
CNOT1-205ENST00000563283 AAASQ9NRG9 546 aa8.87□□□□□ -0.99
CNOT1-205ENST00000563283 MAP10Q9P2G4 905 aa8.87□□□□□ -0.99
CNOT1-205ENST00000563283 WRNQ14191 1432 aaPredicted RBP eCLIP8.87□□□□□ -0.99
CNOT1-205ENST00000563283 TDRD9Q8NDG6 1382 aaKnown RBP8.86□□□□□ -0.99
CNOT1-205ENST00000563283 J3QL48 77 aa8.86□□□□□ -0.99
CNOT1-205ENST00000563283 ST8SIA5O15466 376 aa8.86□□□□□ -0.99
CNOT1-205ENST00000563283 ZNF511Q8NB15 262 aa8.86□□□□□ -0.99
CNOT1-205ENST00000563283 EHBP1Q8NDI1 1231 aa8.86□□□□□ -0.99
CNOT1-205ENST00000563283 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.86□□□□□ -0.99
CNOT1-205ENST00000563283 SIAH2O43255 324 aa8.85□□□□□ -0.99
CNOT1-205ENST00000563283 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
CNOT1-205ENST00000563283 CTC1Q2NKJ3 1217 aa8.85□□□□□ -0.99
CNOT1-205ENST00000563283 NEUROD2Q15784 382 aa8.83□□□□□ -1
CNOT1-205ENST00000563283 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
CNOT1-205ENST00000563283 ZNF787Q6DD87 383 aa8.83□□□□□ -1
CNOT1-205ENST00000563283 PROCA1Q8NCQ7 364 aaPredicted RBP8.83□□□□□ -1
CNOT1-205ENST00000563283 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
CNOT1-205ENST00000563283 AXIN1O15169 862 aa8.82□□□□□ -1
CNOT1-205ENST00000563283 VARSP26640 1264 aaKnown RBP8.82□□□□□ -1
CNOT1-205ENST00000563283 FBXO31Q5XUX0 539 aaPredicted RBP8.82□□□□□ -1
CNOT1-205ENST00000563283 ABCA5Q8WWZ7 1642 aa8.82□□□□□ -1
CNOT1-205ENST00000563283 ALDH1A1P00352 501 aa8.81□□□□□ -1
CNOT1-205ENST00000563283 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
CNOT1-205ENST00000563283 BRPF1P55201 1214 aaPredicted RBP8.8□□□□□ -1
CNOT1-205ENST00000563283 ARMC2Q8NEN0 867 aa8.8□□□□□ -1
CNOT1-205ENST00000563283 HPS1Q92902 700 aa8.8□□□□□ -1
CNOT1-205ENST00000563283 GOPCQ9HD26 462 aa8.8□□□□□ -1
CNOT1-205ENST00000563283 CHD1O14646 1710 aa8.8□□□□□ -1
CNOT1-205ENST00000563283 CTDSPL2Q05D32 466 aa8.79□□□□□ -1
CNOT1-205ENST00000563283 MPNDQ8N594 471 aa8.79□□□□□ -1
CNOT1-205ENST00000563283 FOXJ1Q92949 421 aa8.79□□□□□ -1
CNOT1-205ENST00000563283 TLL2Q9Y6L7 1015 aa8.79□□□□□ -1
CNOT1-205ENST00000563283 PBRM1Q86U86 1689 aa8.78□□□□□ -1
CNOT1-205ENST00000563283 GAPVD1Q14C86 1478 aa8.78□□□□□ -1
CNOT1-205ENST00000563283 DACH1Q9UI36 760 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms