RNA–Protein interactions for RNA: ENST00000562772.1

AP003071.2-201, humanhuman

TSL 1 (best) BASIC

Gene AP003071.2, Length 990 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003071.2-201ENST00000562772 TRPM2O94759 1503 aa11.39□□□□□ -0.59
AP003071.2-201ENST00000562772 PIK3R4Q99570 1358 aa11.39□□□□□ -0.59
AP003071.2-201ENST00000562772 DIP2AQ14689 1571 aa11.38□□□□□ -0.59
AP003071.2-201ENST00000562772 KIF1BO60333 1816 aa11.38□□□□□ -0.59
AP003071.2-201ENST00000562772 PPP1R15AO75807 674 aaPredicted RBP11.38□□□□□ -0.59
AP003071.2-201ENST00000562772 C3orf67Q6ZVT6 689 aa11.38□□□□□ -0.59
AP003071.2-201ENST00000562772 ADAMTS13Q76LX8 1427 aa11.36□□□□□ -0.59
AP003071.2-201ENST00000562772 NCOA3Q9Y6Q9 1424 aa11.36□□□□□ -0.59
AP003071.2-201ENST00000562772 MAMSTRQ6ZN01 415 aa11.36□□□□□ -0.59
AP003071.2-201ENST00000562772 TRIM52Q96A61 297 aa11.36□□□□□ -0.59
AP003071.2-201ENST00000562772 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
AP003071.2-201ENST00000562772 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
AP003071.2-201ENST00000562772 CLTCL1P53675 1640 aa11.35□□□□□ -0.59
AP003071.2-201ENST00000562772 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
AP003071.2-201ENST00000562772 SETBP1Q9Y6X0 1596 aa11.34□□□□□ -0.59
AP003071.2-201ENST00000562772 PIP4K2BP78356 416 aa11.34□□□□□ -0.59
AP003071.2-201ENST00000562772 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
AP003071.2-201ENST00000562772 PODXL2Q9NZ53 605 aa11.34□□□□□ -0.59
AP003071.2-201ENST00000562772 HSPA1LP34931 641 aa11.33□□□□□ -0.6
AP003071.2-201ENST00000562772 FAM135BQ49AJ0 1406 aa11.33□□□□□ -0.6
AP003071.2-201ENST00000562772 RPGRIP1LQ68CZ1 1315 aa11.33□□□□□ -0.6
AP003071.2-201ENST00000562772 NRXN3Q9Y4C0 1643 aa11.32□□□□□ -0.6
AP003071.2-201ENST00000562772 NEXMIFQ5QGS0 1516 aa11.32□□□□□ -0.6
AP003071.2-201ENST00000562772 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
AP003071.2-201ENST00000562772 NUTM2DQ5VT03 806 aaPredicted RBP11.31□□□□□ -0.6
AP003071.2-201ENST00000562772 SLAIN1Q8ND83 568 aa11.31□□□□□ -0.6
AP003071.2-201ENST00000562772 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
AP003071.2-201ENST00000562772 KIF3CO14782 793 aa11.3□□□□□ -0.6
AP003071.2-201ENST00000562772 MPHOSPH9Q99550 1183 aa11.3□□□□□ -0.6
AP003071.2-201ENST00000562772 MSH6P52701 1360 aa11.29□□□□□ -0.6
AP003071.2-201ENST00000562772 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
AP003071.2-201ENST00000562772 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
AP003071.2-201ENST00000562772 XRN1Q8IZH2 1706 aaKnown RBP11.29□□□□□ -0.6
AP003071.2-201ENST00000562772 DISP3Q9P2K9 1392 aa11.28□□□□□ -0.6
AP003071.2-201ENST00000562772 PPLO60437 1756 aa11.28□□□□□ -0.6
AP003071.2-201ENST00000562772 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
AP003071.2-201ENST00000562772 PTPRUQ92729 1446 aa11.27□□□□□ -0.6
AP003071.2-201ENST00000562772 HRCP23327 699 aa11.27□□□□□ -0.61
AP003071.2-201ENST00000562772 NBR1Q14596 966 aa11.27□□□□□ -0.61
AP003071.2-201ENST00000562772 C19orf44Q9H6X5 657 aa11.27□□□□□ -0.61
AP003071.2-201ENST00000562772 GPHNQ9NQX3 736 aaPredicted RBP11.27□□□□□ -0.61
AP003071.2-201ENST00000562772 CCDC144AA2RUR9 1427 aa11.26□□□□□ -0.61
AP003071.2-201ENST00000562772 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
AP003071.2-201ENST00000562772 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
AP003071.2-201ENST00000562772 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
AP003071.2-201ENST00000562772 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.26□□□□□ -0.61
AP003071.2-201ENST00000562772 PRAG1Q86YV5 1406 aa11.26□□□□□ -0.61
AP003071.2-201ENST00000562772 ROBO1Q9Y6N7 1651 aa11.25□□□□□ -0.61
AP003071.2-201ENST00000562772 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
AP003071.2-201ENST00000562772 METP08581 1390 aa11.25□□□□□ -0.61
AP003071.2-201ENST00000562772 DCCP43146 1447 aa11.25□□□□□ -0.61
AP003071.2-201ENST00000562772 SPATA31E1Q6ZUB1 1445 aa11.25□□□□□ -0.61
AP003071.2-201ENST00000562772 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
AP003071.2-201ENST00000562772 IFT172Q9UG01 1749 aa11.23□□□□□ -0.61
AP003071.2-201ENST00000562772 PDE4AP27815 886 aa11.23□□□□□ -0.61
AP003071.2-201ENST00000562772 DSG2Q14126 1118 aa11.23□□□□□ -0.61
AP003071.2-201ENST00000562772 ANKRD30BQ9BXX2 1392 aa11.23□□□□□ -0.61
AP003071.2-201ENST00000562772 RAB3GAP2Q9H2M9 1393 aa11.23□□□□□ -0.61
AP003071.2-201ENST00000562772 MED1Q15648 1581 aaPredicted RBP11.23□□□□□ -0.61
AP003071.2-201ENST00000562772 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
AP003071.2-201ENST00000562772 ATF3P18847 181 aa11.21□□□□□ -0.61
AP003071.2-201ENST00000562772 FOXK1P85037 733 aa11.2□□□□□ -0.62
AP003071.2-201ENST00000562772 ADGRL3Q9HAR2 1447 aa11.19□□□□□ -0.62
AP003071.2-201ENST00000562772 PHLPP1O60346 1717 aa11.19□□□□□ -0.62
AP003071.2-201ENST00000562772 MFSD10Q14728 455 aa11.19□□□□□ -0.62
AP003071.2-201ENST00000562772 ILDR2Q71H61 639 aa11.19□□□□□ -0.62
AP003071.2-201ENST00000562772 ADGRF5Q8IZF2 1346 aa11.18□□□□□ -0.62
AP003071.2-201ENST00000562772 AHDC1Q5TGY3 1603 aaPredicted RBP11.18□□□□□ -0.62
AP003071.2-201ENST00000562772 RGL3Q3MIN7 710 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 PPP1R15BQ5SWA1 713 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 PLPP6Q8IY26 295 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 NALCNQ8IZF0 1738 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 NRXN1Q9ULB1 1477 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 TECPR2O15040 1411 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 PIK3C2GO75747 1445 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 MST1RQ04912 1400 aa11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
AP003071.2-201ENST00000562772 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
AP003071.2-201ENST00000562772 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
AP003071.2-201ENST00000562772 MYOM2P54296 1465 aa11.16□□□□□ -0.62
AP003071.2-201ENST00000562772 JCADQ9P266 1359 aa11.16□□□□□ -0.62
AP003071.2-201ENST00000562772 KNDC1Q76NI1 1749 aa11.15□□□□□ -0.62
AP003071.2-201ENST00000562772 SOCS7O14512 581 aa11.15□□□□□ -0.62
AP003071.2-201ENST00000562772 HOXB3P14651 431 aaPredicted RBP11.15□□□□□ -0.62
AP003071.2-201ENST00000562772 BRINP3Q76B58 766 aa11.15□□□□□ -0.62
AP003071.2-201ENST00000562772 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
AP003071.2-201ENST00000562772 C14orf93Q9H972 538 aaKnown RBP11.15□□□□□ -0.62
AP003071.2-201ENST00000562772 LAMC1P11047 1609 aa11.15□□□□□ -0.62
AP003071.2-201ENST00000562772 LRPPRCP42704 1394 aaKnown RBP11.15□□□□□ -0.63
AP003071.2-201ENST00000562772 ABCC11Q96J66 1382 aa11.15□□□□□ -0.63
AP003071.2-201ENST00000562772 ASXL1Q8IXJ9 1541 aa11.14□□□□□ -0.63
AP003071.2-201ENST00000562772 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
AP003071.2-201ENST00000562772 SHPRHQ149N8 1683 aa11.13□□□□□ -0.63
AP003071.2-201ENST00000562772 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
AP003071.2-201ENST00000562772 C1orf167Q5SNV9 1468 aa11.12□□□□□ -0.63
AP003071.2-201ENST00000562772 CDC42BPGQ6DT37 1551 aa11.11□□□□□ -0.63
AP003071.2-201ENST00000562772 NPM2Q86SE8 214 aaKnown RBP11.11□□□□□ -0.63
AP003071.2-201ENST00000562772 YTHDC2Q9H6S0 1430 aaKnown RBP11.1□□□□□ -0.63
AP003071.2-201ENST00000562772 WDR70Q9NW82 654 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms