RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 YY1P25490 414 aa27.44■■□□□ 1.98
KATNB1-202ENST00000562542 PRDM11Q9NQV5 511 aa27.44■■□□□ 1.98
KATNB1-202ENST00000562542 MPHOSPH9Q99550 1183 aa27.43■■□□□ 1.98
KATNB1-202ENST00000562542 TRPM3Q9HCF6 1732 aaPredicted RBP27.43■■□□□ 1.98
KATNB1-202ENST00000562542 THSD7AQ9UPZ6 1657 aa27.43■■□□□ 1.98
KATNB1-202ENST00000562542 PAK3O75914 559 aaPredicted RBP27.41■■□□□ 1.98
KATNB1-202ENST00000562542 FAM196AQ6ZSG2 479 aa27.41■■□□□ 1.98
KATNB1-202ENST00000562542 CAMKK2Q96RR4 588 aa27.41■■□□□ 1.98
KATNB1-202ENST00000562542 HIRIP3Q9BW71 556 aaPredicted RBP27.41■■□□□ 1.98
KATNB1-202ENST00000562542 ACIN1Q9UKV3 1341 aaKnown RBP27.41■■□□□ 1.98
KATNB1-202ENST00000562542 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
KATNB1-202ENST00000562542 APBA3O96018 575 aa27.4■■□□□ 1.98
KATNB1-202ENST00000562542 EIF3AQ14152 1382 aaKnown RBP27.37■■□□□ 1.97
KATNB1-202ENST00000562542 NGDNQ8NEJ9 315 aaKnown RBP27.37■■□□□ 1.97
KATNB1-202ENST00000562542 STRN4Q9NRL3 753 aa27.37■■□□□ 1.97
KATNB1-202ENST00000562542 SPATA31A1Q5TZJ5 1347 aa27.37■■□□□ 1.97
KATNB1-202ENST00000562542 DLC1Q96QB1 1528 aa27.36■■□□□ 1.97
KATNB1-202ENST00000562542 PARD3Q8TEW0 1356 aa27.36■■□□□ 1.97
KATNB1-202ENST00000562542 MINK1Q8N4C8 1332 aaPredicted RBP27.35■■□□□ 1.97
KATNB1-202ENST00000562542 CHRNA2Q15822 529 aa27.33■■□□□ 1.97
KATNB1-202ENST00000562542 USP35Q9P2H5 1018 aa27.33■■□□□ 1.97
KATNB1-202ENST00000562542 PPP1R1BQ9UD71 204 aaPredicted RBP27.33■■□□□ 1.97
KATNB1-202ENST00000562542 TRAK1Q9UPV9 953 aa27.33■■□□□ 1.97
KATNB1-202ENST00000562542 PRR36Q9H6K5 1346 aa27.33■■□□□ 1.97
KATNB1-202ENST00000562542 NBPF8Q3BBV2 869 aa27.32■■□□□ 1.96
KATNB1-202ENST00000562542 NBPF14Q5TI25 921 aa27.32■■□□□ 1.96
KATNB1-202ENST00000562542 KIAA0232Q92628 1395 aa27.32■■□□□ 1.96
KATNB1-202ENST00000562542 DCAF8L1A6NGE4 600 aa27.31■■□□□ 1.96
KATNB1-202ENST00000562542 PDE3BQ13370 1112 aa27.31■■□□□ 1.96
KATNB1-202ENST00000562542 TULP4Q9NRJ4 1543 aa27.31■■□□□ 1.96
KATNB1-202ENST00000562542 CRYBG1Q9Y4K1 1723 aa27.3■■□□□ 1.96
KATNB1-202ENST00000562542 WASLO00401 505 aaPredicted RBP27.28■■□□□ 1.96
KATNB1-202ENST00000562542 EVA1CP58658 441 aa27.28■■□□□ 1.96
KATNB1-202ENST00000562542 ZC3H6P61129 1189 aaKnown RBP27.27■■□□□ 1.96
KATNB1-202ENST00000562542 SPON1Q9HCB6 807 aa27.25■■□□□ 1.95
KATNB1-202ENST00000562542 RREB1Q92766 1687 aa27.24■■□□□ 1.95
KATNB1-202ENST00000562542 NUP188Q5SRE5 1749 aa27.24■■□□□ 1.95
KATNB1-202ENST00000562542 NUTM2GQ5VZR2 741 aa27.23■■□□□ 1.95
KATNB1-202ENST00000562542 ADGRB1O14514 1584 aa27.22■■□□□ 1.95
KATNB1-202ENST00000562542 BARGINQ6ZT62 677 aa27.22■■□□□ 1.95
KATNB1-202ENST00000562542 PHRF1Q9P1Y6 1649 aaKnown RBP27.2■■□□□ 1.95
KATNB1-202ENST00000562542 SSH2Q76I76 1423 aa27.2■■□□□ 1.94
KATNB1-202ENST00000562542 KCNQ2O43526 872 aa27.19■■□□□ 1.94
KATNB1-202ENST00000562542 NINLQ9Y2I6 1382 aa27.18■■□□□ 1.94
KATNB1-202ENST00000562542 ATP7BP35670 1465 aa27.18■■□□□ 1.94
KATNB1-202ENST00000562542 LARP1Q6PKG0 1096 aaKnown RBP27.17■■□□□ 1.94
KATNB1-202ENST00000562542 TCP11L2Q8N4U5 519 aa27.17■■□□□ 1.94
KATNB1-202ENST00000562542 NUDT16Q96DE0 195 aaKnown RBP27.16■■□□□ 1.94
KATNB1-202ENST00000562542 KDM2AQ9Y2K7 1162 aa27.16■■□□□ 1.94
KATNB1-202ENST00000562542 ITSN1Q15811 1721 aa27.16■■□□□ 1.94
KATNB1-202ENST00000562542 CAMTA1Q9Y6Y1 1673 aa27.11■■□□□ 1.93
KATNB1-202ENST00000562542 ABTB2Q8N961 1025 aa27.09■■□□□ 1.93
KATNB1-202ENST00000562542 DCAF11Q8TEB1 546 aa27.09■■□□□ 1.93
KATNB1-202ENST00000562542 THRAP3Q9Y2W1 955 aaKnown RBP27.09■■□□□ 1.93
KATNB1-202ENST00000562542 C11orf95C9JLR9 678 aaPredicted RBP27.08■■□□□ 1.93
KATNB1-202ENST00000562542 NRKQ7Z2Y5 1582 aa27.08■■□□□ 1.93
KATNB1-202ENST00000562542 ACEP12821 1306 aa27.07■■□□□ 1.92
KATNB1-202ENST00000562542 CDK19Q9BWU1 502 aa27.06■■□□□ 1.92
KATNB1-202ENST00000562542 CPDO75976 1380 aa27.06■■□□□ 1.92
KATNB1-202ENST00000562542 POLR3AO14802 1390 aaPredicted RBP27.04■■□□□ 1.92
KATNB1-202ENST00000562542 OVOS2A0A0G2JMS6 1433 aa27.04■■□□□ 1.92
KATNB1-202ENST00000562542 OVOS2A0A0J9YW53 1432 aa27.04■■□□□ 1.92
KATNB1-202ENST00000562542 OVOS2Q6IE36 1432 aa27.04■■□□□ 1.92
KATNB1-202ENST00000562542 LMO7Q8WWI1 1683 aa27.03■■□□□ 1.92
KATNB1-202ENST00000562542 PARP4Q9UKK3 1724 aaKnown RBP27.02■■□□□ 1.92
KATNB1-202ENST00000562542 ZBTB7CA1YPR0 619 aa27.02■■□□□ 1.92
KATNB1-202ENST00000562542 CCDC61Q9Y6R9 512 aa27.02■■□□□ 1.92
KATNB1-202ENST00000562542 ARHGEF28Q8N1W1 1705 aaKnown RBP27.02■■□□□ 1.92
KATNB1-202ENST00000562542 USP19O94966 1318 aa27■■□□□ 1.91
KATNB1-202ENST00000562542 NLRP13Q86W25 1043 aa27■■□□□ 1.91
KATNB1-202ENST00000562542 BCL11BQ9C0K0 894 aaPredicted RBP27■■□□□ 1.91
KATNB1-202ENST00000562542 ANO8Q9HCE9 1232 aaPredicted RBP27■■□□□ 1.91
KATNB1-202ENST00000562542 COL5A2P05997 1499 aaPredicted RBP27■■□□□ 1.91
KATNB1-202ENST00000562542 PLSCR1O15162 318 aa26.99■■□□□ 1.91
KATNB1-202ENST00000562542 ZBTB7AO95365 584 aa26.99■■□□□ 1.91
KATNB1-202ENST00000562542 GCP02774 474 aa26.99■■□□□ 1.91
KATNB1-202ENST00000562542 CRB1P82279 1406 aa26.98■■□□□ 1.91
KATNB1-202ENST00000562542 PLEKHG3A1L390 1219 aa26.97■■□□□ 1.91
KATNB1-202ENST00000562542 DDB1Q16531 1140 aa26.97■■□□□ 1.91
KATNB1-202ENST00000562542 ZNF784Q8NCA9 323 aaPredicted RBP26.97■■□□□ 1.91
KATNB1-202ENST00000562542 TOPAZ1Q8N9V7 1692 aa26.97■■□□□ 1.91
KATNB1-202ENST00000562542 RGPD3A6NKT7 1758 aaPredicted RBP26.97■■□□□ 1.91
KATNB1-202ENST00000562542 RGPD4Q7Z3J3 1758 aa26.97■■□□□ 1.91
KATNB1-202ENST00000562542 STAC3Q96MF2 364 aa26.96■■□□□ 1.91
KATNB1-202ENST00000562542 PDGFDQ9GZP0 370 aaPredicted RBP26.95■■□□□ 1.9
KATNB1-202ENST00000562542 CASZ1Q86V15 1759 aa26.94■■□□□ 1.9
KATNB1-202ENST00000562542 PEAK1Q9H792 1746 aa26.94■■□□□ 1.9
KATNB1-202ENST00000562542 ATF5Q9Y2D1 282 aaPredicted RBP26.93■■□□□ 1.9
KATNB1-202ENST00000562542 LRRC37A3O60309 1634 aa26.92■■□□□ 1.9
KATNB1-202ENST00000562542 TOM1L2Q6ZVM7 507 aa26.92■■□□□ 1.9
KATNB1-202ENST00000562542 PTF1AQ7RTS3 328 aa26.92■■□□□ 1.9
KATNB1-202ENST00000562542 MYOM1P52179 1685 aa26.91■■□□□ 1.9
KATNB1-202ENST00000562542 SENP3-EIF4A1A0A087X0R7 540 aa26.9■■□□□ 1.9
KATNB1-202ENST00000562542 STK32BQ9NY57 414 aa26.9■■□□□ 1.9
KATNB1-202ENST00000562542 RAB3GAP2Q9H2M9 1393 aa26.89■■□□□ 1.9
KATNB1-202ENST00000562542 SBF2Q86WG5 1849 aa26.89■■□□□ 1.9
KATNB1-202ENST00000562542 PTGER2P43116 358 aa26.89■■□□□ 1.9
KATNB1-202ENST00000562542 SRPK2P78362 688 aaKnown RBP26.89■■□□□ 1.9
KATNB1-202ENST00000562542 PPIP5K1Q6PFW1 1433 aa26.88■■□□□ 1.89
KATNB1-202ENST00000562542 PROM2Q8N271 834 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms