RNA–Protein interactions for RNA: ENST00000562363.5

SCAMP2-202, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-202ENST00000562363 BAG6P46379 1132 aa17.06■□□□□ 0.32
SCAMP2-202ENST00000562363 RGPD1P0DJD0 1748 aa17.06■□□□□ 0.32
SCAMP2-202ENST00000562363 RAB3GAP2Q9H2M9 1393 aa17.04■□□□□ 0.32
SCAMP2-202ENST00000562363 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
SCAMP2-202ENST00000562363 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
SCAMP2-202ENST00000562363 WASLO00401 505 aaPredicted RBP17.03■□□□□ 0.32
SCAMP2-202ENST00000562363 SPATA31A5Q5VU36 1347 aa17.02■□□□□ 0.32
SCAMP2-202ENST00000562363 SPATA31A7Q8IWB4 1347 aa17.02■□□□□ 0.32
SCAMP2-202ENST00000562363 ITSN1Q15811 1721 aa17.02■□□□□ 0.32
SCAMP2-202ENST00000562363 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 ATP7BP35670 1465 aa17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 PHRF1Q9P1Y6 1649 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 NGDNQ8NEJ9 315 aaKnown RBP17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 PRDM11Q9NQV5 511 aa17.01■□□□□ 0.31
SCAMP2-202ENST00000562363 KDM2AQ9Y2K7 1162 aa17■□□□□ 0.31
SCAMP2-202ENST00000562363 HRCP23327 699 aa16.99■□□□□ 0.31
SCAMP2-202ENST00000562363 EN1Q05925 392 aaPredicted RBP16.99■□□□□ 0.31
SCAMP2-202ENST00000562363 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
SCAMP2-202ENST00000562363 DISP2A7MBM2 1401 aa16.98■□□□□ 0.31
SCAMP2-202ENST00000562363 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
SCAMP2-202ENST00000562363 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.3
SCAMP2-202ENST00000562363 TOPAZ1Q8N9V7 1692 aa16.95■□□□□ 0.3
SCAMP2-202ENST00000562363 NUDT16Q96DE0 195 aaKnown RBP16.95■□□□□ 0.3
SCAMP2-202ENST00000562363 R3HDM1Q15032 1099 aaKnown RBP16.94■□□□□ 0.3
SCAMP2-202ENST00000562363 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
SCAMP2-202ENST00000562363 STRN4Q9NRL3 753 aa16.94■□□□□ 0.3
SCAMP2-202ENST00000562363 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
SCAMP2-202ENST00000562363 EZH2Q15910 746 aaKnown RBP16.92■□□□□ 0.3
SCAMP2-202ENST00000562363 STAC3Q96MF2 364 aa16.92■□□□□ 0.3
SCAMP2-202ENST00000562363 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
SCAMP2-202ENST00000562363 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
SCAMP2-202ENST00000562363 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
SCAMP2-202ENST00000562363 SSH2Q76I76 1423 aa16.9■□□□□ 0.3
SCAMP2-202ENST00000562363 TRIM37O94972 964 aa16.9■□□□□ 0.3
SCAMP2-202ENST00000562363 FAM196AQ6ZSG2 479 aa16.9■□□□□ 0.3
SCAMP2-202ENST00000562363 CDK19Q9BWU1 502 aa16.9■□□□□ 0.3
SCAMP2-202ENST00000562363 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
SCAMP2-202ENST00000562363 RREB1Q92766 1687 aa16.89■□□□□ 0.29
SCAMP2-202ENST00000562363 ACEP12821 1306 aa16.89■□□□□ 0.29
SCAMP2-202ENST00000562363 LMO7Q8WWI1 1683 aa16.88■□□□□ 0.29
SCAMP2-202ENST00000562363 CAMKK2Q96RR4 588 aa16.88■□□□□ 0.29
SCAMP2-202ENST00000562363 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
SCAMP2-202ENST00000562363 CAMTA1Q9Y6Y1 1673 aa16.88■□□□□ 0.29
SCAMP2-202ENST00000562363 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
SCAMP2-202ENST00000562363 KIAA1210Q9ULL0 1709 aa16.87■□□□□ 0.29
SCAMP2-202ENST00000562363 APBA3O96018 575 aa16.86■□□□□ 0.29
SCAMP2-202ENST00000562363 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
SCAMP2-202ENST00000562363 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
SCAMP2-202ENST00000562363 EVA1CP58658 441 aa16.85■□□□□ 0.29
SCAMP2-202ENST00000562363 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
SCAMP2-202ENST00000562363 BARGINQ6ZT62 677 aa16.85■□□□□ 0.29
SCAMP2-202ENST00000562363 CPDO75976 1380 aa16.85■□□□□ 0.29
SCAMP2-202ENST00000562363 LARP1Q6PKG0 1096 aaKnown RBP16.84■□□□□ 0.29
SCAMP2-202ENST00000562363 ABTB2Q8N961 1025 aa16.84■□□□□ 0.29
SCAMP2-202ENST00000562363 USP19O94966 1318 aa16.84■□□□□ 0.29
SCAMP2-202ENST00000562363 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
SCAMP2-202ENST00000562363 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
SCAMP2-202ENST00000562363 COL5A2P05997 1499 aaPredicted RBP16.82■□□□□ 0.28
SCAMP2-202ENST00000562363 PPIP5K1Q6PFW1 1433 aa16.82■□□□□ 0.28
SCAMP2-202ENST00000562363 TCP11L2Q8N4U5 519 aa16.82■□□□□ 0.28
SCAMP2-202ENST00000562363 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
SCAMP2-202ENST00000562363 NLRP13Q86W25 1043 aa16.79■□□□□ 0.28
SCAMP2-202ENST00000562363 QRICH2Q9H0J4 1663 aa16.78■□□□□ 0.28
SCAMP2-202ENST00000562363 LRRC37A3O60309 1634 aa16.78■□□□□ 0.28
SCAMP2-202ENST00000562363 GCP02774 474 aa16.78■□□□□ 0.28
SCAMP2-202ENST00000562363 NBPF1Q3BBV0 1214 aa16.78■□□□□ 0.28
SCAMP2-202ENST00000562363 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
SCAMP2-202ENST00000562363 CRB1P82279 1406 aa16.78■□□□□ 0.28
SCAMP2-202ENST00000562363 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
SCAMP2-202ENST00000562363 NBPF14Q5TI25 921 aa16.77■□□□□ 0.28
SCAMP2-202ENST00000562363 CABP2Q9NPB3 220 aa16.77■□□□□ 0.28
SCAMP2-202ENST00000562363 OVOS2A0A0G2JMS6 1433 aa16.77■□□□□ 0.27
SCAMP2-202ENST00000562363 OVOS2A0A0J9YW53 1432 aa16.77■□□□□ 0.27
SCAMP2-202ENST00000562363 OVOS2Q6IE36 1432 aa16.77■□□□□ 0.27
SCAMP2-202ENST00000562363 PEAK1Q9H792 1746 aa16.76■□□□□ 0.27
SCAMP2-202ENST00000562363 SLIT3O75094 1523 aa16.76■□□□□ 0.27
SCAMP2-202ENST00000562363 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
SCAMP2-202ENST00000562363 USP6P35125 1406 aa16.76■□□□□ 0.27
SCAMP2-202ENST00000562363 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
SCAMP2-202ENST00000562363 RGPD3A6NKT7 1758 aaPredicted RBP16.75■□□□□ 0.27
SCAMP2-202ENST00000562363 RGPD4Q7Z3J3 1758 aa16.75■□□□□ 0.27
SCAMP2-202ENST00000562363 PIK3C2AO00443 1686 aa16.74■□□□□ 0.27
SCAMP2-202ENST00000562363 WNK3Q9BYP7 1800 aa16.73■□□□□ 0.27
SCAMP2-202ENST00000562363 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
SCAMP2-202ENST00000562363 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
SCAMP2-202ENST00000562363 NLRP6P59044 892 aa16.72■□□□□ 0.27
SCAMP2-202ENST00000562363 SBF2Q86WG5 1849 aa16.71■□□□□ 0.27
SCAMP2-202ENST00000562363 CABP1Q9NZU7 370 aa16.71■□□□□ 0.27
SCAMP2-202ENST00000562363 PPP1R1BQ9UD71 204 aaPredicted RBP16.71■□□□□ 0.27
SCAMP2-202ENST00000562363 COL18A1P39060 1754 aa16.71■□□□□ 0.27
SCAMP2-202ENST00000562363 TOM1L2Q6ZVM7 507 aa16.7■□□□□ 0.26
SCAMP2-202ENST00000562363 SPON1Q9HCB6 807 aa16.7■□□□□ 0.26
SCAMP2-202ENST00000562363 CPSF1Q10570 1443 aaKnown RBP16.7■□□□□ 0.26
SCAMP2-202ENST00000562363 KCNQ2O43526 872 aa16.69■□□□□ 0.26
SCAMP2-202ENST00000562363 DDB1Q16531 1140 aa16.69■□□□□ 0.26
SCAMP2-202ENST00000562363 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
SCAMP2-202ENST00000562363 YY1P25490 414 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms