RNA–Protein interactions for RNA: ENST00000561816.1

LINC01616-201, Transcript of long intergenic non-protein coding RNA 1616, humanhuman

BASIC

Gene LINC01616, Length 2,280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01616-201ENST00000561816 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
LINC01616-201ENST00000561816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.49□□□□□ -0.89
LINC01616-201ENST00000561816 PPM1GO15355 546 aaPredicted RBP9.49□□□□□ -0.89
LINC01616-201ENST00000561816 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
LINC01616-201ENST00000561816 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
LINC01616-201ENST00000561816 RBM27Q9P2N5 1060 aaKnown RBP9.49□□□□□ -0.89
LINC01616-201ENST00000561816 PPP1R1BQ9UD71 204 aaPredicted RBP9.49□□□□□ -0.89
LINC01616-201ENST00000561816 TIAM1Q13009 1591 aa9.49□□□□□ -0.89
LINC01616-201ENST00000561816 ANKRD33BA6NCL7 494 aa9.49□□□□□ -0.89
LINC01616-201ENST00000561816 RECKO95980 971 aa9.49□□□□□ -0.89
LINC01616-201ENST00000561816 C7P10643 843 aa9.49□□□□□ -0.89
LINC01616-201ENST00000561816 GJA5P36382 358 aa9.49□□□□□ -0.89
LINC01616-201ENST00000561816 FAM174AQ8TBP5 190 aa9.49□□□□□ -0.89
LINC01616-201ENST00000561816 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
LINC01616-201ENST00000561816 RDH13Q8NBN7 331 aa9.48□□□□□ -0.89
LINC01616-201ENST00000561816 CCNB3Q8WWL7 1395 aa9.48□□□□□ -0.89
LINC01616-201ENST00000561816 TMEM134Q9H6X4 195 aa9.48□□□□□ -0.89
LINC01616-201ENST00000561816 ABCA5Q8WWZ7 1642 aa9.47□□□□□ -0.89
LINC01616-201ENST00000561816 MARSP56192 900 aaKnown RBP9.47□□□□□ -0.89
LINC01616-201ENST00000561816 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
LINC01616-201ENST00000561816 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC01616-201ENST00000561816 USP17L3A6NCW0 530 aa9.47□□□□□ -0.89
LINC01616-201ENST00000561816 USP17L4A6NCW7 530 aa9.47□□□□□ -0.89
LINC01616-201ENST00000561816 PLCG2P16885 1265 aa9.47□□□□□ -0.89
LINC01616-201ENST00000561816 USP17L2Q6R6M4 530 aa9.47□□□□□ -0.89
LINC01616-201ENST00000561816 USP17L1Q7RTZ2 530 aa9.47□□□□□ -0.89
LINC01616-201ENST00000561816 C19orf67A6NJJ6 358 aa9.46□□□□□ -0.9
LINC01616-201ENST00000561816 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.9
LINC01616-201ENST00000561816 ZDHHC16Q969W1 377 aa9.46□□□□□ -0.9
LINC01616-201ENST00000561816 SIRT1Q96EB6 747 aa9.46□□□□□ -0.9
LINC01616-201ENST00000561816 LRRC9Q6ZRR7 1453 aa9.46□□□□□ -0.9
LINC01616-201ENST00000561816 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
LINC01616-201ENST00000561816 POTEFA5A3E0 1075 aa9.45□□□□□ -0.9
LINC01616-201ENST00000561816 DHX57Q6P158 1386 aaKnown RBP9.45□□□□□ -0.9
LINC01616-201ENST00000561816 FYCO1Q9BQS8 1478 aa9.45□□□□□ -0.9
LINC01616-201ENST00000561816 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
LINC01616-201ENST00000561816 FBXO45P0C2W1 286 aa9.44□□□□□ -0.9
LINC01616-201ENST00000561816 ANO2Q9NQ90 1003 aa9.44□□□□□ -0.9
LINC01616-201ENST00000561816 SLC10A3P09131 477 aa9.44□□□□□ -0.9
LINC01616-201ENST00000561816 MTMR2Q13614 643 aa9.44□□□□□ -0.9
LINC01616-201ENST00000561816 ELOAQ14241 798 aaKnown RBP9.44□□□□□ -0.9
LINC01616-201ENST00000561816 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
LINC01616-201ENST00000561816 LGR5O75473 907 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
LINC01616-201ENST00000561816 CASKIN1Q8WXD9 1431 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 CTTNBP2Q8WZ74 1663 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 PCF11O94913 1555 aaKnown RBP9.43□□□□□ -0.9
LINC01616-201ENST00000561816 GAPVD1Q14C86 1478 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L21D6R901 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 KCNH2Q12809 1159 aa9.43□□□□□ -0.9
LINC01616-201ENST00000561816 SREK1Q8WXA9 508 aaKnown RBP9.43□□□□□ -0.9
LINC01616-201ENST00000561816 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
LINC01616-201ENST00000561816 ZNF211Q13398 564 aaPredicted RBP9.42□□□□□ -0.9
LINC01616-201ENST00000561816 ASTLQ6HA08 431 aaPredicted RBP9.42□□□□□ -0.9
LINC01616-201ENST00000561816 HELBQ8NG08 1087 aaPredicted RBP9.42□□□□□ -0.9
LINC01616-201ENST00000561816 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
LINC01616-201ENST00000561816 DRC1Q96MC2 740 aa9.42□□□□□ -0.9
LINC01616-201ENST00000561816 FMN1Q68DA7 1419 aa9.41□□□□□ -0.9
LINC01616-201ENST00000561816 NUDT7P0C024 238 aa9.41□□□□□ -0.9
LINC01616-201ENST00000561816 DNAJB2P25686 324 aa9.41□□□□□ -0.9
LINC01616-201ENST00000561816 ARID4AP29374 1257 aaPredicted RBP9.41□□□□□ -0.9
LINC01616-201ENST00000561816 PTK7Q13308 1070 aa9.41□□□□□ -0.9
LINC01616-201ENST00000561816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC01616-201ENST00000561816 EVX2Q03828 476 aa9.4□□□□□ -0.9
LINC01616-201ENST00000561816 FBXO33Q7Z6M2 555 aa9.4□□□□□ -0.9
LINC01616-201ENST00000561816 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
LINC01616-201ENST00000561816 SAMD9Q5K651 1589 aa9.4□□□□□ -0.9
LINC01616-201ENST00000561816 PPP1R3GB7ZBB8 358 aa9.4□□□□□ -0.9
LINC01616-201ENST00000561816 GCGRP47871 477 aa9.4□□□□□ -0.9
LINC01616-201ENST00000561816 IER5LQ5T953 404 aa9.4□□□□□ -0.9
LINC01616-201ENST00000561816 PNMA3Q9UL41 463 aa9.4□□□□□ -0.9
LINC01616-201ENST00000561816 FHOD3Q2V2M9 1422 aa9.4□□□□□ -0.91
LINC01616-201ENST00000561816 C6orf229H3BNL8 230 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 SKIP12755 728 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 NCOA4Q13772 614 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 GIMAP6Q6P9H5 292 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 SNAPC4Q5SXM2 1469 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 NAALADL2Q58DX5 795 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 B4GALNT3Q6L9W6 998 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 DHX37Q8IY37 1157 aaKnown RBP9.39□□□□□ -0.91
LINC01616-201ENST00000561816 SPATA32Q96LK8 384 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 MKRN1Q9UHC7 482 aaKnown RBP9.39□□□□□ -0.91
LINC01616-201ENST00000561816 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
LINC01616-201ENST00000561816 KIF21AQ7Z4S6 1674 aa9.39□□□□□ -0.91
LINC01616-201ENST00000561816 ATP2B4P23634 1241 aa9.38□□□□□ -0.91
LINC01616-201ENST00000561816 TSNAXIP1Q2TAA8 658 aa9.38□□□□□ -0.91
LINC01616-201ENST00000561816 PHLDB1Q86UU1 1377 aa9.38□□□□□ -0.91
LINC01616-201ENST00000561816 FAM196BA6NMK8 535 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms