RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 MORC1Q86VD1 984 aa17.45■□□□□ 0.38
COTL1-202ENST00000561707 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
COTL1-202ENST00000561707 USP6P35125 1406 aa17.45■□□□□ 0.38
COTL1-202ENST00000561707 EDC4Q6P2E9 1401 aaKnown RBP17.45■□□□□ 0.38
COTL1-202ENST00000561707 TNNT2P45379 298 aaPredicted RBP17.43■□□□□ 0.38
COTL1-202ENST00000561707 SSH2Q76I76 1423 aa17.43■□□□□ 0.38
COTL1-202ENST00000561707 KIF20BQ96Q89 1820 aa17.42■□□□□ 0.38
COTL1-202ENST00000561707 CCER2I3L3R5 266 aa17.42■□□□□ 0.38
COTL1-202ENST00000561707 BRINP3Q76B58 766 aa17.42■□□□□ 0.38
COTL1-202ENST00000561707 KRT28Q7Z3Y7 464 aa17.42■□□□□ 0.38
COTL1-202ENST00000561707 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
COTL1-202ENST00000561707 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
COTL1-202ENST00000561707 MYBBP1AQ9BQG0 1328 aaKnown RBP17.41■□□□□ 0.38
COTL1-202ENST00000561707 FBLN1P23142 703 aa17.4■□□□□ 0.38
COTL1-202ENST00000561707 NUTM2GQ5VZR2 741 aa17.4■□□□□ 0.38
COTL1-202ENST00000561707 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.37
COTL1-202ENST00000561707 NSD2O96028 1365 aa17.39■□□□□ 0.37
COTL1-202ENST00000561707 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
COTL1-202ENST00000561707 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
COTL1-202ENST00000561707 ANKRD26Q9UPS8 1709 aa17.38■□□□□ 0.37
COTL1-202ENST00000561707 MRS2Q9HD23 443 aa17.37■□□□□ 0.37
COTL1-202ENST00000561707 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
COTL1-202ENST00000561707 COG3Q96JB2 828 aa17.36■□□□□ 0.37
COTL1-202ENST00000561707 NLRP6P59044 892 aa17.35■□□□□ 0.37
COTL1-202ENST00000561707 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
COTL1-202ENST00000561707 BRD4O60885 1362 aaPredicted RBP17.34■□□□□ 0.37
COTL1-202ENST00000561707 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
COTL1-202ENST00000561707 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
COTL1-202ENST00000561707 CERKQ8TCT0 537 aa17.34■□□□□ 0.37
COTL1-202ENST00000561707 MAP2P11137 1827 aaKnown RBP17.33■□□□□ 0.37
COTL1-202ENST00000561707 TRPM3Q9HCF6 1732 aaPredicted RBP17.33■□□□□ 0.37
COTL1-202ENST00000561707 PIK3C2AO00443 1686 aa17.33■□□□□ 0.37
COTL1-202ENST00000561707 USP31Q70CQ4 1352 aa17.33■□□□□ 0.36
COTL1-202ENST00000561707 NPHP3Q7Z494 1330 aa17.33■□□□□ 0.36
COTL1-202ENST00000561707 MTHFSP49914 203 aa17.33■□□□□ 0.36
COTL1-202ENST00000561707 SOX12O15370 315 aa17.32■□□□□ 0.36
COTL1-202ENST00000561707 UBAP1LF5GYI3 381 aa17.31■□□□□ 0.36
COTL1-202ENST00000561707 TOM1O60784 492 aa17.31■□□□□ 0.36
COTL1-202ENST00000561707 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
COTL1-202ENST00000561707 MARF1Q9Y4F3 1742 aaKnown RBP17.3■□□□□ 0.36
COTL1-202ENST00000561707 PXDNQ92626 1479 aa17.3■□□□□ 0.36
COTL1-202ENST00000561707 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
COTL1-202ENST00000561707 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
COTL1-202ENST00000561707 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
COTL1-202ENST00000561707 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
COTL1-202ENST00000561707 SOS2Q07890 1332 aaPredicted RBP17.28■□□□□ 0.36
COTL1-202ENST00000561707 SPATA31A3Q5VYP0 1347 aa17.28■□□□□ 0.36
COTL1-202ENST00000561707 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
COTL1-202ENST00000561707 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
COTL1-202ENST00000561707 FAM9BQ8IZU0 186 aa17.28■□□□□ 0.36
COTL1-202ENST00000561707 PNISRQ8TF01 805 aaKnown RBP17.28■□□□□ 0.36
COTL1-202ENST00000561707 ROBO1Q9Y6N7 1651 aa17.28■□□□□ 0.36
COTL1-202ENST00000561707 PPM1GO15355 546 aaPredicted RBP17.27■□□□□ 0.36
COTL1-202ENST00000561707 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
COTL1-202ENST00000561707 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
COTL1-202ENST00000561707 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
COTL1-202ENST00000561707 AATKQ6ZMQ8 1374 aa17.25■□□□□ 0.35
COTL1-202ENST00000561707 USP54Q70EL1 1684 aa17.24■□□□□ 0.35
COTL1-202ENST00000561707 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
COTL1-202ENST00000561707 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
COTL1-202ENST00000561707 TNS3Q68CZ2 1445 aa17.23■□□□□ 0.35
COTL1-202ENST00000561707 IQSEC2Q5JU85 1478 aa17.23■□□□□ 0.35
COTL1-202ENST00000561707 GCP02774 474 aa17.22■□□□□ 0.35
COTL1-202ENST00000561707 CFAP53Q96M91 514 aa17.22■□□□□ 0.35
COTL1-202ENST00000561707 USP19O94966 1318 aa17.21■□□□□ 0.35
COTL1-202ENST00000561707 MAP3K19Q56UN5 1328 aa17.21■□□□□ 0.35
COTL1-202ENST00000561707 MED1Q15648 1581 aaPredicted RBP17.2■□□□□ 0.34
COTL1-202ENST00000561707 ZBTB7CA1YPR0 619 aa17.2■□□□□ 0.34
COTL1-202ENST00000561707 KCNH5Q8NCM2 988 aa17.2■□□□□ 0.34
COTL1-202ENST00000561707 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
COTL1-202ENST00000561707 AMPHP49418 695 aa17.19■□□□□ 0.34
COTL1-202ENST00000561707 PEAK1Q9H792 1746 aa17.18■□□□□ 0.34
COTL1-202ENST00000561707 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
COTL1-202ENST00000561707 ARHGEF10O15013 1369 aa17.18■□□□□ 0.34
COTL1-202ENST00000561707 PNPLA6Q8IY17 1366 aa17.18■□□□□ 0.34
COTL1-202ENST00000561707 SLIT3O75094 1523 aa17.18■□□□□ 0.34
COTL1-202ENST00000561707 ZC3H6P61129 1189 aaKnown RBP17.18■□□□□ 0.34
COTL1-202ENST00000561707 HSP90AB2PQ58FF8 381 aa17.18■□□□□ 0.34
COTL1-202ENST00000561707 LRRC59Q96AG4 307 aaKnown RBP17.18■□□□□ 0.34
COTL1-202ENST00000561707 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
COTL1-202ENST00000561707 NFAT5O94916 1531 aa17.17■□□□□ 0.34
COTL1-202ENST00000561707 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
COTL1-202ENST00000561707 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
COTL1-202ENST00000561707 WDR43Q15061 677 aaKnown RBP eCLIP17.17■□□□□ 0.34
COTL1-202ENST00000561707 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
COTL1-202ENST00000561707 INSRP06213 1382 aa17.16■□□□□ 0.34
COTL1-202ENST00000561707 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
COTL1-202ENST00000561707 ARHGEF25Q86VW2 580 aa17.16■□□□□ 0.34
COTL1-202ENST00000561707 LTN1O94822 1766 aa17.15■□□□□ 0.34
COTL1-202ENST00000561707 IL13P35225 146 aa17.15■□□□□ 0.34
COTL1-202ENST00000561707 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
COTL1-202ENST00000561707 CRYBG1Q9Y4K1 1723 aa17.14■□□□□ 0.33
COTL1-202ENST00000561707 U2SURPO15042 1029 aaKnown RBP17.14■□□□□ 0.33
COTL1-202ENST00000561707 HOXC9P31274 260 aa17.14■□□□□ 0.33
COTL1-202ENST00000561707 IP6K1Q92551 441 aa17.14■□□□□ 0.33
COTL1-202ENST00000561707 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
COTL1-202ENST00000561707 PHRF1Q9P1Y6 1649 aaKnown RBP17.14■□□□□ 0.33
COTL1-202ENST00000561707 CDK12Q9NYV4 1490 aaPredicted RBP17.13■□□□□ 0.33
COTL1-202ENST00000561707 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
COTL1-202ENST00000561707 LTV1Q96GA3 475 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms