RNA–Protein interactions for RNA: ENST00000561338.5

ALDH1A3-207, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-207ENST00000561338 CABP2Q9NPB3 220 aa23.92■■□□□ 1.42
ALDH1A3-207ENST00000561338 USP54Q70EL1 1684 aa23.92■■□□□ 1.42
ALDH1A3-207ENST00000561338 SBNO2Q9Y2G9 1366 aa23.91■■□□□ 1.42
ALDH1A3-207ENST00000561338 FNBP4Q8N3X1 1017 aaPredicted RBP23.91■■□□□ 1.42
ALDH1A3-207ENST00000561338 NGLY1Q96IV0 654 aa23.91■■□□□ 1.42
ALDH1A3-207ENST00000561338 ACEP12821 1306 aa23.9■■□□□ 1.42
ALDH1A3-207ENST00000561338 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
ALDH1A3-207ENST00000561338 PLEKHG5O94827 1062 aa23.89■■□□□ 1.41
ALDH1A3-207ENST00000561338 NGDNQ8NEJ9 315 aaKnown RBP23.89■■□□□ 1.41
ALDH1A3-207ENST00000561338 PLEKHG3A1L390 1219 aa23.88■■□□□ 1.41
ALDH1A3-207ENST00000561338 CCDC61Q9Y6R9 512 aa23.88■■□□□ 1.41
ALDH1A3-207ENST00000561338 RGPD5Q99666 1765 aa23.88■■□□□ 1.41
ALDH1A3-207ENST00000561338 SRPK2P78362 688 aaKnown RBP23.87■■□□□ 1.41
ALDH1A3-207ENST00000561338 USP21Q9UK80 565 aa23.87■■□□□ 1.41
ALDH1A3-207ENST00000561338 USP6P35125 1406 aa23.86■■□□□ 1.41
ALDH1A3-207ENST00000561338 LMOD2Q6P5Q4 547 aa23.86■■□□□ 1.41
ALDH1A3-207ENST00000561338 MYOM1P52179 1685 aa23.86■■□□□ 1.41
ALDH1A3-207ENST00000561338 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
ALDH1A3-207ENST00000561338 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
ALDH1A3-207ENST00000561338 QTRT2Q9H974 415 aaKnown RBP23.85■■□□□ 1.41
ALDH1A3-207ENST00000561338 SLIT3O75094 1523 aa23.84■■□□□ 1.41
ALDH1A3-207ENST00000561338 CD163L1Q9NR16 1453 aa23.84■■□□□ 1.41
ALDH1A3-207ENST00000561338 RXRBP28702 533 aa23.84■■□□□ 1.41
ALDH1A3-207ENST00000561338 COL18A1P39060 1754 aa23.83■■□□□ 1.41
ALDH1A3-207ENST00000561338 EVC2Q86UK5 1308 aa23.83■■□□□ 1.4
ALDH1A3-207ENST00000561338 WNK3Q9BYP7 1800 aa23.82■■□□□ 1.4
ALDH1A3-207ENST00000561338 EP400Q96L91 3159 aa23.82■■□□□ 1.4
ALDH1A3-207ENST00000561338 RBM6P78332 1123 aaKnown RBP23.81■■□□□ 1.4
ALDH1A3-207ENST00000561338 THSD7AQ9UPZ6 1657 aa23.8■■□□□ 1.4
ALDH1A3-207ENST00000561338 PAK3O75914 559 aaPredicted RBP23.8■■□□□ 1.4
ALDH1A3-207ENST00000561338 LTN1O94822 1766 aa23.8■■□□□ 1.4
ALDH1A3-207ENST00000561338 CPSF1Q10570 1443 aaKnown RBP23.79■■□□□ 1.4
ALDH1A3-207ENST00000561338 TRPC5Q9UL62 973 aaPredicted RBP23.79■■□□□ 1.4
ALDH1A3-207ENST00000561338 CABP1Q9NZU7 370 aa23.78■■□□□ 1.4
ALDH1A3-207ENST00000561338 USP19O94966 1318 aa23.78■■□□□ 1.4
ALDH1A3-207ENST00000561338 CLSPNQ9HAW4 1339 aa23.78■■□□□ 1.4
ALDH1A3-207ENST00000561338 NUTM2GQ5VZR2 741 aa23.77■■□□□ 1.4
ALDH1A3-207ENST00000561338 ATAD2Q6PL18 1390 aa23.77■■□□□ 1.4
ALDH1A3-207ENST00000561338 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
ALDH1A3-207ENST00000561338 HAP1P54257 671 aaPredicted RBP23.76■■□□□ 1.39
ALDH1A3-207ENST00000561338 UNC5CLQ8IV45 518 aa23.75■■□□□ 1.39
ALDH1A3-207ENST00000561338 TESK2Q96S53 571 aa23.75■■□□□ 1.39
ALDH1A3-207ENST00000561338 KIAA0232Q92628 1395 aa23.75■■□□□ 1.39
ALDH1A3-207ENST00000561338 CAMTA1Q9Y6Y1 1673 aa23.74■■□□□ 1.39
ALDH1A3-207ENST00000561338 USP47Q96K76 1375 aa23.74■■□□□ 1.39
ALDH1A3-207ENST00000561338 NFAT5O94916 1531 aa23.74■■□□□ 1.39
ALDH1A3-207ENST00000561338 KIF20BQ96Q89 1820 aa23.73■■□□□ 1.39
ALDH1A3-207ENST00000561338 BRD4O60885 1362 aaPredicted RBP23.72■■□□□ 1.39
ALDH1A3-207ENST00000561338 GJD4Q96KN9 370 aaPredicted RBP23.7■■□□□ 1.38
ALDH1A3-207ENST00000561338 ST20-MTHFSA0A0A6YYL1 179 aa23.69■■□□□ 1.38
ALDH1A3-207ENST00000561338 ABTB2Q8N961 1025 aa23.68■■□□□ 1.38
ALDH1A3-207ENST00000561338 CPDO75976 1380 aa23.67■■□□□ 1.38
ALDH1A3-207ENST00000561338 VPS72Q15906 364 aa23.67■■□□□ 1.38
ALDH1A3-207ENST00000561338 CHRNA2Q15822 529 aa23.66■■□□□ 1.38
ALDH1A3-207ENST00000561338 UPF1Q92900 1129 aaKnown RBP eCLIP23.66■■□□□ 1.38
ALDH1A3-207ENST00000561338 BTG4Q9NY30 223 aa23.66■■□□□ 1.38
ALDH1A3-207ENST00000561338 PARP4Q9UKK3 1724 aaKnown RBP23.66■■□□□ 1.38
ALDH1A3-207ENST00000561338 A0A1W2PP64 1363 aa23.65■■□□□ 1.38
ALDH1A3-207ENST00000561338 KTN1Q86UP2 1357 aaKnown RBP23.65■■□□□ 1.38
ALDH1A3-207ENST00000561338 PRDM11Q9NQV5 511 aa23.65■■□□□ 1.38
ALDH1A3-207ENST00000561338 TNS1Q9HBL0 1735 aaKnown RBP23.64■■□□□ 1.38
ALDH1A3-207ENST00000561338 TTC21BQ7Z4L5 1316 aa23.64■■□□□ 1.38
ALDH1A3-207ENST00000561338 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.37
ALDH1A3-207ENST00000561338 COL5A2P05997 1499 aaPredicted RBP23.63■■□□□ 1.37
ALDH1A3-207ENST00000561338 LRRC37A3O60309 1634 aa23.62■■□□□ 1.37
ALDH1A3-207ENST00000561338 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
ALDH1A3-207ENST00000561338 EDC4Q6P2E9 1401 aaKnown RBP23.6■■□□□ 1.37
ALDH1A3-207ENST00000561338 CCER1Q8TC90 406 aaPredicted RBP23.6■■□□□ 1.37
ALDH1A3-207ENST00000561338 SLC12A5Q9H2X9 1139 aa23.6■■□□□ 1.37
ALDH1A3-207ENST00000561338 ABCC6O95255 1503 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 RGPD1P0DJD0 1748 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 NLRP13Q86W25 1043 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 RGPD2P0DJD1 1756 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 OVOS2A0A0J9YW53 1432 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 OVOS2Q6IE36 1432 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 TTC21AQ8NDW8 1320 aa23.59■■□□□ 1.37
ALDH1A3-207ENST00000561338 GCP02774 474 aa23.58■■□□□ 1.37
ALDH1A3-207ENST00000561338 ZRANB1Q9UGI0 708 aa23.58■■□□□ 1.37
ALDH1A3-207ENST00000561338 NLRP6P59044 892 aa23.57■■□□□ 1.36
ALDH1A3-207ENST00000561338 SBF2Q86WG5 1849 aa23.56■■□□□ 1.36
ALDH1A3-207ENST00000561338 ANKRD26Q9UPS8 1709 aa23.56■■□□□ 1.36
ALDH1A3-207ENST00000561338 USP31Q70CQ4 1352 aa23.56■■□□□ 1.36
ALDH1A3-207ENST00000561338 PUS7Q96PZ0 661 aaKnown RBP23.56■■□□□ 1.36
ALDH1A3-207ENST00000561338 ZNF692Q9BU19 519 aaPredicted RBP23.56■■□□□ 1.36
ALDH1A3-207ENST00000561338 NINLQ9Y2I6 1382 aa23.55■■□□□ 1.36
ALDH1A3-207ENST00000561338 CCDC9Q9Y3X0 531 aaKnown RBP23.55■■□□□ 1.36
ALDH1A3-207ENST00000561338 PEAK1Q9H792 1746 aa23.54■■□□□ 1.36
ALDH1A3-207ENST00000561338 ONECUT3O60422 494 aaPredicted RBP23.54■■□□□ 1.36
ALDH1A3-207ENST00000561338 NME9Q86XW9 330 aa23.54■■□□□ 1.36
ALDH1A3-207ENST00000561338 SEPT12Q8IYM1 358 aa23.54■■□□□ 1.36
ALDH1A3-207ENST00000561338 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
ALDH1A3-207ENST00000561338 SPATA31A1Q5TZJ5 1347 aa23.54■■□□□ 1.36
ALDH1A3-207ENST00000561338 FAM208AQ9UK61 1670 aaKnown RBP23.54■■□□□ 1.36
ALDH1A3-207ENST00000561338 AATKQ6ZMQ8 1374 aa23.52■■□□□ 1.36
ALDH1A3-207ENST00000561338 FAM98CQ17RN3 349 aaKnown RBP23.52■■□□□ 1.36
ALDH1A3-207ENST00000561338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.52■■□□□ 1.36
ALDH1A3-207ENST00000561338 ANKRD36BQ8N2N9 1353 aa23.52■■□□□ 1.36
ALDH1A3-207ENST00000561338 STRN4Q9NRL3 753 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms