RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 ZRANB1Q9UGI0 708 aa19.5■□□□□ 0.71
PSME1-208ENST00000561059 ALS2Q96Q42 1657 aa19.49■□□□□ 0.71
PSME1-208ENST00000561059 ATP7BP35670 1465 aa19.49■□□□□ 0.71
PSME1-208ENST00000561059 STAC3Q96MF2 364 aa19.49■□□□□ 0.71
PSME1-208ENST00000561059 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
PSME1-208ENST00000561059 CCDC125Q86Z20 511 aa19.48■□□□□ 0.71
PSME1-208ENST00000561059 KRT27Q7Z3Y8 459 aa19.47■□□□□ 0.71
PSME1-208ENST00000561059 BLMP54132 1417 aaPredicted RBP19.47■□□□□ 0.71
PSME1-208ENST00000561059 ONECUT3O60422 494 aaPredicted RBP19.46■□□□□ 0.71
PSME1-208ENST00000561059 CHRNA2Q15822 529 aa19.46■□□□□ 0.71
PSME1-208ENST00000561059 FAM182BQ5T319 152 aa19.46■□□□□ 0.71
PSME1-208ENST00000561059 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
PSME1-208ENST00000561059 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
PSME1-208ENST00000561059 ACEP12821 1306 aa19.44■□□□□ 0.7
PSME1-208ENST00000561059 KIAA0232Q92628 1395 aa19.44■□□□□ 0.7
PSME1-208ENST00000561059 ZC3H6P61129 1189 aaKnown RBP19.43■□□□□ 0.7
PSME1-208ENST00000561059 SF3B2Q13435 895 aaKnown RBP19.43■□□□□ 0.7
PSME1-208ENST00000561059 COL14A1Q05707 1796 aaKnown RBP19.42■□□□□ 0.7
PSME1-208ENST00000561059 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
PSME1-208ENST00000561059 NBPF8Q3BBV2 869 aa19.41■□□□□ 0.7
PSME1-208ENST00000561059 CRYBG1Q9Y4K1 1723 aa19.41■□□□□ 0.7
PSME1-208ENST00000561059 SPATA31A5Q5VU36 1347 aa19.41■□□□□ 0.7
PSME1-208ENST00000561059 SPATA31A7Q8IWB4 1347 aa19.41■□□□□ 0.7
PSME1-208ENST00000561059 CCDC61Q9Y6R9 512 aa19.4■□□□□ 0.7
PSME1-208ENST00000561059 ITSN1Q15811 1721 aa19.39■□□□□ 0.7
PSME1-208ENST00000561059 SRPK2P78362 688 aaKnown RBP19.39■□□□□ 0.69
PSME1-208ENST00000561059 CABP2Q9NPB3 220 aa19.39■□□□□ 0.69
PSME1-208ENST00000561059 SIN3AQ96ST3 1273 aa19.38■□□□□ 0.69
PSME1-208ENST00000561059 TOPAZ1Q8N9V7 1692 aa19.37■□□□□ 0.69
PSME1-208ENST00000561059 POLR3AO14802 1390 aaPredicted RBP19.37■□□□□ 0.69
PSME1-208ENST00000561059 CENPJQ9HC77 1338 aaPredicted RBP19.37■□□□□ 0.69
PSME1-208ENST00000561059 USP35Q9P2H5 1018 aa19.37■□□□□ 0.69
PSME1-208ENST00000561059 PHRF1Q9P1Y6 1649 aaKnown RBP19.36■□□□□ 0.69
PSME1-208ENST00000561059 PLEKHG3A1L390 1219 aa19.36■□□□□ 0.69
PSME1-208ENST00000561059 ABTB2Q8N961 1025 aa19.36■□□□□ 0.69
PSME1-208ENST00000561059 L3MBTL2Q969R5 705 aa19.36■□□□□ 0.69
PSME1-208ENST00000561059 KIAA1210Q9ULL0 1709 aa19.36■□□□□ 0.69
PSME1-208ENST00000561059 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
PSME1-208ENST00000561059 SPATA31A1Q5TZJ5 1347 aa19.34■□□□□ 0.69
PSME1-208ENST00000561059 PSDA5PKW4 1024 aaPredicted RBP19.34■□□□□ 0.69
PSME1-208ENST00000561059 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
PSME1-208ENST00000561059 EN1Q05925 392 aaPredicted RBP19.33■□□□□ 0.68
PSME1-208ENST00000561059 ZBTB7CA1YPR0 619 aa19.32■□□□□ 0.68
PSME1-208ENST00000561059 BAG6P46379 1132 aa19.32■□□□□ 0.68
PSME1-208ENST00000561059 EVA1CP58658 441 aa19.32■□□□□ 0.68
PSME1-208ENST00000561059 THSD7AQ9UPZ6 1657 aa19.31■□□□□ 0.68
PSME1-208ENST00000561059 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
PSME1-208ENST00000561059 CABP1Q9NZU7 370 aa19.31■□□□□ 0.68
PSME1-208ENST00000561059 NRKQ7Z2Y5 1582 aa19.31■□□□□ 0.68
PSME1-208ENST00000561059 SSH2Q76I76 1423 aa19.29■□□□□ 0.68
PSME1-208ENST00000561059 CAMTA1Q9Y6Y1 1673 aa19.29■□□□□ 0.68
PSME1-208ENST00000561059 USP19O94966 1318 aa19.28■□□□□ 0.68
PSME1-208ENST00000561059 QRICH2Q9H0J4 1663 aa19.28■□□□□ 0.68
PSME1-208ENST00000561059 TRIM37O94972 964 aa19.27■□□□□ 0.68
PSME1-208ENST00000561059 GCP02774 474 aa19.27■□□□□ 0.68
PSME1-208ENST00000561059 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
PSME1-208ENST00000561059 NLRP6P59044 892 aa19.25■□□□□ 0.67
PSME1-208ENST00000561059 EZH2Q15910 746 aaKnown RBP19.25■□□□□ 0.67
PSME1-208ENST00000561059 CPDO75976 1380 aa19.24■□□□□ 0.67
PSME1-208ENST00000561059 USP6P35125 1406 aa19.24■□□□□ 0.67
PSME1-208ENST00000561059 ROCK2O75116 1388 aaKnown RBP19.23■□□□□ 0.67
PSME1-208ENST00000561059 PDE3BQ13370 1112 aa19.23■□□□□ 0.67
PSME1-208ENST00000561059 R3HDM1Q15032 1099 aaKnown RBP19.23■□□□□ 0.67
PSME1-208ENST00000561059 LMO7Q8WWI1 1683 aa19.23■□□□□ 0.67
PSME1-208ENST00000561059 RGPD1P0DJD0 1748 aa19.22■□□□□ 0.67
PSME1-208ENST00000561059 SOX12O15370 315 aa19.22■□□□□ 0.67
PSME1-208ENST00000561059 FAM196AQ6ZSG2 479 aa19.22■□□□□ 0.67
PSME1-208ENST00000561059 TCP11L2Q8N4U5 519 aa19.22■□□□□ 0.67
PSME1-208ENST00000561059 EVC2Q86UK5 1308 aa19.22■□□□□ 0.67
PSME1-208ENST00000561059 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
PSME1-208ENST00000561059 APBA3O96018 575 aa19.21■□□□□ 0.67
PSME1-208ENST00000561059 BARGINQ6ZT62 677 aa19.21■□□□□ 0.67
PSME1-208ENST00000561059 TNS1Q9HBL0 1735 aaKnown RBP19.21■□□□□ 0.67
PSME1-208ENST00000561059 COL5A2P05997 1499 aaPredicted RBP19.2■□□□□ 0.66
PSME1-208ENST00000561059 CAMKK2Q96RR4 588 aa19.18■□□□□ 0.66
PSME1-208ENST00000561059 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
PSME1-208ENST00000561059 PIK3C2AO00443 1686 aa19.17■□□□□ 0.66
PSME1-208ENST00000561059 AXIN2Q9Y2T1 843 aa19.16■□□□□ 0.66
PSME1-208ENST00000561059 TTC21BQ7Z4L5 1316 aa19.16■□□□□ 0.66
PSME1-208ENST00000561059 BRD4O60885 1362 aaPredicted RBP19.16■□□□□ 0.66
PSME1-208ENST00000561059 SLIT3O75094 1523 aa19.15■□□□□ 0.66
PSME1-208ENST00000561059 CRB1P82279 1406 aa19.15■□□□□ 0.66
PSME1-208ENST00000561059 TOM1L2Q6ZVM7 507 aa19.14■□□□□ 0.65
PSME1-208ENST00000561059 THRAP3Q9Y2W1 955 aaKnown RBP19.14■□□□□ 0.65
PSME1-208ENST00000561059 AATKQ6ZMQ8 1374 aa19.14■□□□□ 0.65
PSME1-208ENST00000561059 LRP5O75197 1615 aa19.13■□□□□ 0.65
PSME1-208ENST00000561059 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
PSME1-208ENST00000561059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
PSME1-208ENST00000561059 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
PSME1-208ENST00000561059 CPSF1Q10570 1443 aaKnown RBP19.1■□□□□ 0.65
PSME1-208ENST00000561059 PTF1AQ7RTS3 328 aa19.1■□□□□ 0.65
PSME1-208ENST00000561059 ARHGEF25Q86VW2 580 aa19.1■□□□□ 0.65
PSME1-208ENST00000561059 ZNF692Q9BU19 519 aaPredicted RBP19.1■□□□□ 0.65
PSME1-208ENST00000561059 CSB-PGBD3P0DP91 1061 aa19.09■□□□□ 0.65
PSME1-208ENST00000561059 WDR17Q8IZU2 1322 aa19.08■□□□□ 0.65
PSME1-208ENST00000561059 DDB1Q16531 1140 aa19.08■□□□□ 0.64
PSME1-208ENST00000561059 TMC1Q8TDI8 760 aa19.08■□□□□ 0.64
PSME1-208ENST00000561059 COL18A1P39060 1754 aa19.08■□□□□ 0.64
PSME1-208ENST00000561059 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.64
PSME1-208ENST00000561059 LRRC37A3O60309 1634 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms