RNA–Protein interactions for RNA: ENST00000560920.6

TRIP4-211, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-211ENST00000560920 SPATA31A7Q8IWB4 1347 aa27.5■■□□□ 1.99
TRIP4-211ENST00000560920 LRP5O75197 1615 aa27.5■■□□□ 1.99
TRIP4-211ENST00000560920 FAM182BQ5T319 152 aa27.5■■□□□ 1.99
TRIP4-211ENST00000560920 KDM2AQ9Y2K7 1162 aa27.5■■□□□ 1.99
TRIP4-211ENST00000560920 TULP4Q9NRJ4 1543 aa27.5■■□□□ 1.99
TRIP4-211ENST00000560920 EIF3AQ14152 1382 aaKnown RBP27.49■■□□□ 1.99
TRIP4-211ENST00000560920 EN1Q05925 392 aaPredicted RBP27.48■■□□□ 1.99
TRIP4-211ENST00000560920 NGDNQ8NEJ9 315 aaKnown RBP27.48■■□□□ 1.99
TRIP4-211ENST00000560920 RAB3GAP2Q9H2M9 1393 aa27.48■■□□□ 1.99
TRIP4-211ENST00000560920 HRCP23327 699 aa27.47■■□□□ 1.99
TRIP4-211ENST00000560920 DCAF11Q8TEB1 546 aa27.47■■□□□ 1.99
TRIP4-211ENST00000560920 PAK3O75914 559 aaPredicted RBP27.46■■□□□ 1.99
TRIP4-211ENST00000560920 CRYBG1Q9Y4K1 1723 aa27.46■■□□□ 1.99
TRIP4-211ENST00000560920 PRDM11Q9NQV5 511 aa27.44■■□□□ 1.98
TRIP4-211ENST00000560920 THSD7AQ9UPZ6 1657 aa27.42■■□□□ 1.98
TRIP4-211ENST00000560920 RGPD1P0DJD0 1748 aa27.41■■□□□ 1.98
TRIP4-211ENST00000560920 NUDT16Q96DE0 195 aaKnown RBP27.4■■□□□ 1.98
TRIP4-211ENST00000560920 STAC3Q96MF2 364 aa27.39■■□□□ 1.98
TRIP4-211ENST00000560920 SPATA31A1Q5TZJ5 1347 aa27.39■■□□□ 1.97
TRIP4-211ENST00000560920 KIAA0232Q92628 1395 aa27.38■■□□□ 1.97
TRIP4-211ENST00000560920 CHRNA2Q15822 529 aa27.38■■□□□ 1.97
TRIP4-211ENST00000560920 DISP2A7MBM2 1401 aa27.38■■□□□ 1.97
TRIP4-211ENST00000560920 R3HDM1Q15032 1099 aaKnown RBP27.37■■□□□ 1.97
TRIP4-211ENST00000560920 ATP7BP35670 1465 aa27.37■■□□□ 1.97
TRIP4-211ENST00000560920 EZH2Q15910 746 aaKnown RBP27.35■■□□□ 1.97
TRIP4-211ENST00000560920 TNS1Q9HBL0 1735 aaKnown RBP27.35■■□□□ 1.97
TRIP4-211ENST00000560920 ZC3H6P61129 1189 aaKnown RBP27.34■■□□□ 1.97
TRIP4-211ENST00000560920 STRN4Q9NRL3 753 aa27.34■■□□□ 1.97
TRIP4-211ENST00000560920 ARHGEF28Q8N1W1 1705 aaKnown RBP27.33■■□□□ 1.97
TRIP4-211ENST00000560920 NUTM2GQ5VZR2 741 aa27.33■■□□□ 1.97
TRIP4-211ENST00000560920 CAMKK2Q96RR4 588 aa27.33■■□□□ 1.97
TRIP4-211ENST00000560920 CDK19Q9BWU1 502 aa27.33■■□□□ 1.97
TRIP4-211ENST00000560920 TRIM37O94972 964 aa27.32■■□□□ 1.96
TRIP4-211ENST00000560920 FAM196AQ6ZSG2 479 aa27.32■■□□□ 1.96
TRIP4-211ENST00000560920 ITSN1Q15811 1721 aa27.32■■□□□ 1.96
TRIP4-211ENST00000560920 PHRF1Q9P1Y6 1649 aaKnown RBP27.3■■□□□ 1.96
TRIP4-211ENST00000560920 NBPF8Q3BBV2 869 aa27.29■■□□□ 1.96
TRIP4-211ENST00000560920 ACEP12821 1306 aa27.29■■□□□ 1.96
TRIP4-211ENST00000560920 POLR3AO14802 1390 aaPredicted RBP27.29■■□□□ 1.96
TRIP4-211ENST00000560920 USP35Q9P2H5 1018 aa27.27■■□□□ 1.96
TRIP4-211ENST00000560920 PLEKHG3A1L390 1219 aa27.26■■□□□ 1.95
TRIP4-211ENST00000560920 BARGINQ6ZT62 677 aa27.26■■□□□ 1.95
TRIP4-211ENST00000560920 CCDC61Q9Y6R9 512 aa27.26■■□□□ 1.95
TRIP4-211ENST00000560920 APBA3O96018 575 aa27.25■■□□□ 1.95
TRIP4-211ENST00000560920 EVA1CP58658 441 aa27.25■■□□□ 1.95
TRIP4-211ENST00000560920 SSH2Q76I76 1423 aa27.24■■□□□ 1.95
TRIP4-211ENST00000560920 LARP1Q6PKG0 1096 aaKnown RBP27.23■■□□□ 1.95
TRIP4-211ENST00000560920 TOPAZ1Q8N9V7 1692 aa27.23■■□□□ 1.95
TRIP4-211ENST00000560920 CAMTA1Q9Y6Y1 1673 aa27.23■■□□□ 1.95
TRIP4-211ENST00000560920 ABTB2Q8N961 1025 aa27.22■■□□□ 1.95
TRIP4-211ENST00000560920 PDE3BQ13370 1112 aa27.21■■□□□ 1.95
TRIP4-211ENST00000560920 PARD3Q8TEW0 1356 aa27.21■■□□□ 1.95
TRIP4-211ENST00000560920 NRKQ7Z2Y5 1582 aa27.19■■□□□ 1.94
TRIP4-211ENST00000560920 TCP11L2Q8N4U5 519 aa27.19■■□□□ 1.94
TRIP4-211ENST00000560920 CPDO75976 1380 aa27.19■■□□□ 1.94
TRIP4-211ENST00000560920 USP19O94966 1318 aa27.18■■□□□ 1.94
TRIP4-211ENST00000560920 LMO7Q8WWI1 1683 aa27.17■■□□□ 1.94
TRIP4-211ENST00000560920 NBPF1Q3BBV0 1214 aa27.16■■□□□ 1.94
TRIP4-211ENST00000560920 GCP02774 474 aa27.15■■□□□ 1.94
TRIP4-211ENST00000560920 NLRP13Q86W25 1043 aa27.14■■□□□ 1.94
TRIP4-211ENST00000560920 RREB1Q92766 1687 aa27.14■■□□□ 1.93
TRIP4-211ENST00000560920 KIAA1210Q9ULL0 1709 aa27.13■■□□□ 1.93
TRIP4-211ENST00000560920 THRAP3Q9Y2W1 955 aaKnown RBP27.13■■□□□ 1.93
TRIP4-211ENST00000560920 NUP188Q5SRE5 1749 aa27.11■■□□□ 1.93
TRIP4-211ENST00000560920 PPIP5K1Q6PFW1 1433 aa27.1■■□□□ 1.93
TRIP4-211ENST00000560920 SRPK2P78362 688 aaKnown RBP27.1■■□□□ 1.93
TRIP4-211ENST00000560920 NBPF14Q5TI25 921 aa27.1■■□□□ 1.93
TRIP4-211ENST00000560920 COL5A2P05997 1499 aaPredicted RBP27.09■■□□□ 1.93
TRIP4-211ENST00000560920 CABP2Q9NPB3 220 aa27.09■■□□□ 1.93
TRIP4-211ENST00000560920 PARP4Q9UKK3 1724 aaKnown RBP27.06■■□□□ 1.92
TRIP4-211ENST00000560920 CENPJQ9HC77 1338 aaPredicted RBP27.06■■□□□ 1.92
TRIP4-211ENST00000560920 BRD4O60885 1362 aaPredicted RBP27.05■■□□□ 1.92
TRIP4-211ENST00000560920 CRB1P82279 1406 aa27.04■■□□□ 1.92
TRIP4-211ENST00000560920 CABP1Q9NZU7 370 aa27.03■■□□□ 1.92
TRIP4-211ENST00000560920 C11orf95C9JLR9 678 aaPredicted RBP27.02■■□□□ 1.92
TRIP4-211ENST00000560920 NLRP6P59044 892 aa27.02■■□□□ 1.92
TRIP4-211ENST00000560920 AATKQ6ZMQ8 1374 aa27.01■■□□□ 1.91
TRIP4-211ENST00000560920 ZBTB7CA1YPR0 619 aa27.01■■□□□ 1.91
TRIP4-211ENST00000560920 USP6P35125 1406 aa27■■□□□ 1.91
TRIP4-211ENST00000560920 PEAK1Q9H792 1746 aa27■■□□□ 1.91
TRIP4-211ENST00000560920 KCNQ2O43526 872 aa26.99■■□□□ 1.91
TRIP4-211ENST00000560920 SPON1Q9HCB6 807 aa26.99■■□□□ 1.91
TRIP4-211ENST00000560920 OVOS2A0A0G2JMS6 1433 aa26.99■■□□□ 1.91
TRIP4-211ENST00000560920 OVOS2A0A0J9YW53 1432 aa26.99■■□□□ 1.91
TRIP4-211ENST00000560920 OVOS2Q6IE36 1432 aa26.99■■□□□ 1.91
TRIP4-211ENST00000560920 SLIT3O75094 1523 aa26.98■■□□□ 1.91
TRIP4-211ENST00000560920 PLSCR1O15162 318 aa26.97■■□□□ 1.91
TRIP4-211ENST00000560920 PTF1AQ7RTS3 328 aa26.97■■□□□ 1.91
TRIP4-211ENST00000560920 AXIN2Q9Y2T1 843 aa26.97■■□□□ 1.91
TRIP4-211ENST00000560920 DDB1Q16531 1140 aa26.96■■□□□ 1.91
TRIP4-211ENST00000560920 QRICH2Q9H0J4 1663 aa26.95■■□□□ 1.91
TRIP4-211ENST00000560920 SBF2Q86WG5 1849 aa26.95■■□□□ 1.91
TRIP4-211ENST00000560920 COL18A1P39060 1754 aa26.95■■□□□ 1.9
TRIP4-211ENST00000560920 TOM1L2Q6ZVM7 507 aa26.95■■□□□ 1.9
TRIP4-211ENST00000560920 LRRC37A3O60309 1634 aa26.94■■□□□ 1.9
TRIP4-211ENST00000560920 YY1P25490 414 aa26.94■■□□□ 1.9
TRIP4-211ENST00000560920 PPP1R1BQ9UD71 204 aaPredicted RBP26.94■■□□□ 1.9
TRIP4-211ENST00000560920 BCL11BQ9C0K0 894 aaPredicted RBP26.93■■□□□ 1.9
TRIP4-211ENST00000560920 MARCH10Q8NA82 808 aaPredicted RBP26.92■■□□□ 1.9
TRIP4-211ENST00000560920 ANO8Q9HCE9 1232 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms