RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PRAM1Q96QH2 718 aa14.91□□□□□ -0.02
TPM1-225ENST00000560679 C14orf93Q9H972 538 aaKnown RBP14.91□□□□□ -0.02
TPM1-225ENST00000560679 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
TPM1-225ENST00000560679 PHRF1Q9P1Y6 1649 aaKnown RBP14.9□□□□□ -0.02
TPM1-225ENST00000560679 TULP4Q9NRJ4 1543 aa14.9□□□□□ -0.02
TPM1-225ENST00000560679 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
TPM1-225ENST00000560679 CFAP70Q5T0N1 1121 aa14.89□□□□□ -0.03
TPM1-225ENST00000560679 PRR36Q9H6K5 1346 aa14.89□□□□□ -0.03
TPM1-225ENST00000560679 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
TPM1-225ENST00000560679 CAMKK2Q96RR4 588 aa14.88□□□□□ -0.03
TPM1-225ENST00000560679 MPHOSPH9Q99550 1183 aa14.86□□□□□ -0.03
TPM1-225ENST00000560679 PARD3Q8TEW0 1356 aa14.85□□□□□ -0.03
TPM1-225ENST00000560679 SPATA31A1Q5TZJ5 1347 aa14.85□□□□□ -0.03
TPM1-225ENST00000560679 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
TPM1-225ENST00000560679 TRIM37O94972 964 aa14.84□□□□□ -0.03
TPM1-225ENST00000560679 HIRIP3Q9BW71 556 aaPredicted RBP14.84□□□□□ -0.03
TPM1-225ENST00000560679 PRDM11Q9NQV5 511 aa14.84□□□□□ -0.03
TPM1-225ENST00000560679 KIAA0232Q92628 1395 aa14.84□□□□□ -0.03
TPM1-225ENST00000560679 ITSN1Q15811 1721 aa14.83□□□□□ -0.04
TPM1-225ENST00000560679 ATP7BP35670 1465 aa14.82□□□□□ -0.04
TPM1-225ENST00000560679 NRKQ7Z2Y5 1582 aa14.82□□□□□ -0.04
TPM1-225ENST00000560679 YY1P25490 414 aa14.82□□□□□ -0.04
TPM1-225ENST00000560679 POGKQ9P215 609 aa14.82□□□□□ -0.04
TPM1-225ENST00000560679 EIF3AQ14152 1382 aaKnown RBP14.82□□□□□ -0.04
TPM1-225ENST00000560679 LMO7Q8WWI1 1683 aa14.81□□□□□ -0.04
TPM1-225ENST00000560679 CHRNA2Q15822 529 aa14.81□□□□□ -0.04
TPM1-225ENST00000560679 FAM196AQ6ZSG2 479 aa14.81□□□□□ -0.04
TPM1-225ENST00000560679 MINK1Q8N4C8 1332 aaPredicted RBP14.81□□□□□ -0.04
TPM1-225ENST00000560679 APBA3O96018 575 aa14.8□□□□□ -0.04
TPM1-225ENST00000560679 SSH2Q76I76 1423 aa14.8□□□□□ -0.04
TPM1-225ENST00000560679 TOPAZ1Q8N9V7 1692 aa14.8□□□□□ -0.04
TPM1-225ENST00000560679 CAMTA1Q9Y6Y1 1673 aa14.8□□□□□ -0.04
TPM1-225ENST00000560679 ARHGEF28Q8N1W1 1705 aaKnown RBP14.8□□□□□ -0.04
TPM1-225ENST00000560679 TRAK1Q9UPV9 953 aa14.79□□□□□ -0.04
TPM1-225ENST00000560679 UTRNP46939 3433 aa14.79□□□□□ -0.04
TPM1-225ENST00000560679 WASLO00401 505 aaPredicted RBP14.78□□□□□ -0.04
TPM1-225ENST00000560679 STRN4Q9NRL3 753 aa14.78□□□□□ -0.04
TPM1-225ENST00000560679 PEAK1Q9H792 1746 aa14.78□□□□□ -0.04
TPM1-225ENST00000560679 PARP4Q9UKK3 1724 aaKnown RBP14.78□□□□□ -0.04
TPM1-225ENST00000560679 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
TPM1-225ENST00000560679 RGPD3A6NKT7 1758 aaPredicted RBP14.77□□□□□ -0.05
TPM1-225ENST00000560679 RGPD4Q7Z3J3 1758 aa14.77□□□□□ -0.05
TPM1-225ENST00000560679 CASZ1Q86V15 1759 aa14.77□□□□□ -0.05
TPM1-225ENST00000560679 NINLQ9Y2I6 1382 aa14.76□□□□□ -0.05
TPM1-225ENST00000560679 BARGINQ6ZT62 677 aa14.76□□□□□ -0.05
TPM1-225ENST00000560679 NGDNQ8NEJ9 315 aaKnown RBP14.76□□□□□ -0.05
TPM1-225ENST00000560679 USP35Q9P2H5 1018 aa14.75□□□□□ -0.05
TPM1-225ENST00000560679 ZC3H6P61129 1189 aaKnown RBP14.74□□□□□ -0.05
TPM1-225ENST00000560679 LARP1Q6PKG0 1096 aaKnown RBP14.73□□□□□ -0.05
TPM1-225ENST00000560679 LRRC37A3O60309 1634 aa14.73□□□□□ -0.05
TPM1-225ENST00000560679 POLR3AO14802 1390 aaPredicted RBP14.73□□□□□ -0.05
TPM1-225ENST00000560679 CPDO75976 1380 aa14.73□□□□□ -0.05
TPM1-225ENST00000560679 COL5A2P05997 1499 aaPredicted RBP14.72□□□□□ -0.05
TPM1-225ENST00000560679 SBF2Q86WG5 1849 aa14.72□□□□□ -0.05
TPM1-225ENST00000560679 PDE3BQ13370 1112 aa14.72□□□□□ -0.05
TPM1-225ENST00000560679 NUTM2GQ5VZR2 741 aa14.72□□□□□ -0.05
TPM1-225ENST00000560679 SPON1Q9HCB6 807 aa14.72□□□□□ -0.05
TPM1-225ENST00000560679 MYOM1P52179 1685 aa14.71□□□□□ -0.05
TPM1-225ENST00000560679 KCNQ2O43526 872 aa14.71□□□□□ -0.05
TPM1-225ENST00000560679 NBPF8Q3BBV2 869 aa14.71□□□□□ -0.05
TPM1-225ENST00000560679 NBPF14Q5TI25 921 aa14.71□□□□□ -0.05
TPM1-225ENST00000560679 NUDT16Q96DE0 195 aaKnown RBP14.71□□□□□ -0.05
TPM1-225ENST00000560679 USP19O94966 1318 aa14.7□□□□□ -0.06
TPM1-225ENST00000560679 TCP11L2Q8N4U5 519 aa14.7□□□□□ -0.06
TPM1-225ENST00000560679 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
TPM1-225ENST00000560679 PPP1R1BQ9UD71 204 aaPredicted RBP14.7□□□□□ -0.06
TPM1-225ENST00000560679 WNK3Q9BYP7 1800 aa14.69□□□□□ -0.06
TPM1-225ENST00000560679 OVOS2A0A0G2JMS6 1433 aa14.68□□□□□ -0.06
TPM1-225ENST00000560679 OVOS2A0A0J9YW53 1432 aa14.68□□□□□ -0.06
TPM1-225ENST00000560679 OVOS2Q6IE36 1432 aa14.68□□□□□ -0.06
TPM1-225ENST00000560679 ACEP12821 1306 aa14.67□□□□□ -0.06
TPM1-225ENST00000560679 EVA1CP58658 441 aa14.67□□□□□ -0.06
TPM1-225ENST00000560679 PDGFDQ9GZP0 370 aaPredicted RBP14.66□□□□□ -0.06
TPM1-225ENST00000560679 THRAP3Q9Y2W1 955 aaKnown RBP14.66□□□□□ -0.06
TPM1-225ENST00000560679 CRB1P82279 1406 aa14.66□□□□□ -0.06
TPM1-225ENST00000560679 PTF1AQ7RTS3 328 aa14.65□□□□□ -0.06
TPM1-225ENST00000560679 KDM2AQ9Y2K7 1162 aa14.65□□□□□ -0.06
TPM1-225ENST00000560679 DCAF11Q8TEB1 546 aa14.64□□□□□ -0.07
TPM1-225ENST00000560679 CDK19Q9BWU1 502 aa14.64□□□□□ -0.07
TPM1-225ENST00000560679 SLIT3O75094 1523 aa14.64□□□□□ -0.07
TPM1-225ENST00000560679 COL18A1P39060 1754 aa14.64□□□□□ -0.07
TPM1-225ENST00000560679 PLEKHG3A1L390 1219 aa14.63□□□□□ -0.07
TPM1-225ENST00000560679 PLSCR1O15162 318 aa14.63□□□□□ -0.07
TPM1-225ENST00000560679 PTGER2P43116 358 aa14.63□□□□□ -0.07
TPM1-225ENST00000560679 AKAP12Q02952 1782 aa14.62□□□□□ -0.07
TPM1-225ENST00000560679 RAB3GAP2Q9H2M9 1393 aa14.62□□□□□ -0.07
TPM1-225ENST00000560679 GCP02774 474 aa14.62□□□□□ -0.07
TPM1-225ENST00000560679 ABTB2Q8N961 1025 aa14.62□□□□□ -0.07
TPM1-225ENST00000560679 ZNF784Q8NCA9 323 aaPredicted RBP14.62□□□□□ -0.07
TPM1-225ENST00000560679 PROM2Q8N271 834 aa14.61□□□□□ -0.07
TPM1-225ENST00000560679 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
TPM1-225ENST00000560679 PIK3C2AO00443 1686 aa14.61□□□□□ -0.07
TPM1-225ENST00000560679 BCL9O00512 1426 aa14.6□□□□□ -0.07
TPM1-225ENST00000560679 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
TPM1-225ENST00000560679 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
TPM1-225ENST00000560679 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
TPM1-225ENST00000560679 KIAA1210Q9ULL0 1709 aa14.6□□□□□ -0.07
TPM1-225ENST00000560679 PPIP5K1Q6PFW1 1433 aa14.59□□□□□ -0.07
TPM1-225ENST00000560679 AATKQ6ZMQ8 1374 aa14.59□□□□□ -0.07
TPM1-225ENST00000560679 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms