RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PANK3Q9H999 370 aa23.88■■□□□ 1.41
SEMA4B-215ENST00000560089 CAMSAP1Q5T5Y3 1602 aa23.87■■□□□ 1.41
SEMA4B-215ENST00000560089 ZKSCAN5Q9Y2L8 839 aa23.87■■□□□ 1.41
SEMA4B-215ENST00000560089 RALGAPBQ86X10 1494 aa23.87■■□□□ 1.41
SEMA4B-215ENST00000560089 ST20-MTHFSA0A0A6YYL1 179 aa23.86■■□□□ 1.41
SEMA4B-215ENST00000560089 C22orf23Q9BZE7 217 aa23.84■■□□□ 1.41
SEMA4B-215ENST00000560089 ATP2B3Q16720 1220 aa23.83■■□□□ 1.41
SEMA4B-215ENST00000560089 PLPPR3Q6T4P5 718 aa23.83■■□□□ 1.41
SEMA4B-215ENST00000560089 MCM5P33992 734 aa23.82■■□□□ 1.4
SEMA4B-215ENST00000560089 ADGRF5Q8IZF2 1346 aa23.82■■□□□ 1.4
SEMA4B-215ENST00000560089 DDIT3P35638 169 aa23.81■■□□□ 1.4
SEMA4B-215ENST00000560089 MYRIPQ8NFW9 859 aa23.81■■□□□ 1.4
SEMA4B-215ENST00000560089 ARHGEF40Q8TER5 1519 aa23.81■■□□□ 1.4
SEMA4B-215ENST00000560089 IDI1Q13907 227 aa23.81■■□□□ 1.4
SEMA4B-215ENST00000560089 MROH2AA6NES4 1674 aa23.8■■□□□ 1.4
SEMA4B-215ENST00000560089 ZNF710Q8N1W2 664 aa23.8■■□□□ 1.4
SEMA4B-215ENST00000560089 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
SEMA4B-215ENST00000560089 ZFP91Q96JP5 570 aaPredicted RBP23.79■■□□□ 1.4
SEMA4B-215ENST00000560089 IBTKQ9P2D0 1353 aaPredicted RBP23.79■■□□□ 1.4
SEMA4B-215ENST00000560089 GOLGA2Q08379 1002 aa23.79■■□□□ 1.4
SEMA4B-215ENST00000560089 JARID2Q92833 1246 aaPredicted RBP23.79■■□□□ 1.4
SEMA4B-215ENST00000560089 CLUAP1Q96AJ1 413 aa23.79■■□□□ 1.4
SEMA4B-215ENST00000560089 PDLIM2Q96JY6 352 aa23.79■■□□□ 1.4
SEMA4B-215ENST00000560089 MFAP1P55081 439 aaKnown RBP23.78■■□□□ 1.4
SEMA4B-215ENST00000560089 RAB3GAP1Q15042 981 aa23.78■■□□□ 1.4
SEMA4B-215ENST00000560089 NCOA3Q9Y6Q9 1424 aa23.78■■□□□ 1.4
SEMA4B-215ENST00000560089 CIZ1Q9ULV3 898 aaPredicted RBP23.78■■□□□ 1.4
SEMA4B-215ENST00000560089 CGNL1Q0VF96 1302 aa23.77■■□□□ 1.4
SEMA4B-215ENST00000560089 CFAP70Q5T0N1 1121 aa23.77■■□□□ 1.4
SEMA4B-215ENST00000560089 TSC1Q92574 1164 aa23.77■■□□□ 1.4
SEMA4B-215ENST00000560089 KIF1BO60333 1816 aa23.77■■□□□ 1.4
SEMA4B-215ENST00000560089 PLEKHH1Q9ULM0 1364 aa23.77■■□□□ 1.4
SEMA4B-215ENST00000560089 SYNMO15061 1565 aa23.77■■□□□ 1.4
SEMA4B-215ENST00000560089 ESF1Q9H501 851 aaKnown RBP23.76■■□□□ 1.39
SEMA4B-215ENST00000560089 ZMYM3Q14202 1370 aa23.76■■□□□ 1.39
SEMA4B-215ENST00000560089 IGSF3O75054 1194 aa23.76■■□□□ 1.39
SEMA4B-215ENST00000560089 DDX49Q9Y6V7 483 aaKnown RBP23.76■■□□□ 1.39
SEMA4B-215ENST00000560089 NOS1P29475 1434 aa23.76■■□□□ 1.39
SEMA4B-215ENST00000560089 CLTCQ00610 1675 aaKnown RBP23.75■■□□□ 1.39
SEMA4B-215ENST00000560089 BCAR3O75815 825 aa23.75■■□□□ 1.39
SEMA4B-215ENST00000560089 GOLGA6L22H0YM25 854 aa23.74■■□□□ 1.39
SEMA4B-215ENST00000560089 MAPK8IP2Q13387 824 aaPredicted RBP23.74■■□□□ 1.39
SEMA4B-215ENST00000560089 ZNF771Q7L3S4 317 aaPredicted RBP23.74■■□□□ 1.39
SEMA4B-215ENST00000560089 SPDYE4A6NLX3 237 aa23.74■■□□□ 1.39
SEMA4B-215ENST00000560089 KLHL40Q2TBA0 621 aa23.73■■□□□ 1.39
SEMA4B-215ENST00000560089 CCDC39Q9UFE4 941 aa23.73■■□□□ 1.39
SEMA4B-215ENST00000560089 AGLP35573 1532 aa23.72■■□□□ 1.39
SEMA4B-215ENST00000560089 MADDQ8WXG6 1647 aa23.72■■□□□ 1.39
SEMA4B-215ENST00000560089 ADAMTS8Q9UP79 889 aa23.72■■□□□ 1.39
SEMA4B-215ENST00000560089 CC2D1BQ5T0F9 858 aaKnown RBP23.72■■□□□ 1.39
SEMA4B-215ENST00000560089 IRX5P78411 483 aaPredicted RBP23.71■■□□□ 1.39
SEMA4B-215ENST00000560089 SMC5Q8IY18 1101 aa23.71■■□□□ 1.39
SEMA4B-215ENST00000560089 REREQ9P2R6 1566 aa23.71■■□□□ 1.39
SEMA4B-215ENST00000560089 ZC3H13Q5T200 1668 aaKnown RBP23.71■■□□□ 1.39
SEMA4B-215ENST00000560089 ZNF445P59923 1031 aa23.71■■□□□ 1.39
SEMA4B-215ENST00000560089 ZBTB7CA1YPR0 619 aa23.7■■□□□ 1.39
SEMA4B-215ENST00000560089 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.39
SEMA4B-215ENST00000560089 TEX2Q8IWB9 1127 aa23.7■■□□□ 1.39
SEMA4B-215ENST00000560089 PDZRN3Q9UPQ7 1066 aa23.7■■□□□ 1.39
SEMA4B-215ENST00000560089 ARHGAP31Q2M1Z3 1444 aa23.7■■□□□ 1.38
SEMA4B-215ENST00000560089 RBSNQ9H1K0 784 aa23.69■■□□□ 1.38
SEMA4B-215ENST00000560089 SLFN5Q08AF3 891 aa23.69■■□□□ 1.38
SEMA4B-215ENST00000560089 ADGRB3O60242 1522 aa23.69■■□□□ 1.38
SEMA4B-215ENST00000560089 PRIMPOLQ96LW4 560 aa23.69■■□□□ 1.38
SEMA4B-215ENST00000560089 COG6Q9Y2V7 657 aa23.69■■□□□ 1.38
SEMA4B-215ENST00000560089 CEBPAP49715 358 aaPredicted RBP23.68■■□□□ 1.38
SEMA4B-215ENST00000560089 STAG3Q9UJ98 1225 aa23.68■■□□□ 1.38
SEMA4B-215ENST00000560089 PREX1Q8TCU6 1659 aa23.68■■□□□ 1.38
SEMA4B-215ENST00000560089 RBM25P49756 843 aaKnown RBP23.68■■□□□ 1.38
SEMA4B-215ENST00000560089 PMFBP1Q8TBY8 1022 aa23.68■■□□□ 1.38
SEMA4B-215ENST00000560089 ZNF521Q96K83 1311 aa23.67■■□□□ 1.38
SEMA4B-215ENST00000560089 E9PSI1 815 aa23.67■■□□□ 1.38
SEMA4B-215ENST00000560089 IRX3P78415 501 aaPredicted RBP23.67■■□□□ 1.38
SEMA4B-215ENST00000560089 HMGN5P82970 282 aaKnown RBP23.67■■□□□ 1.38
SEMA4B-215ENST00000560089 CHMP4AQ9BY43 222 aa23.67■■□□□ 1.38
SEMA4B-215ENST00000560089 KIAA2012Q0VF49 1180 aa23.67■■□□□ 1.38
SEMA4B-215ENST00000560089 VGFO15240 615 aaPredicted RBP23.66■■□□□ 1.38
SEMA4B-215ENST00000560089 KCNJ4P48050 445 aa23.66■■□□□ 1.38
SEMA4B-215ENST00000560089 TMEM132EQ6IEE7 984 aa23.66■■□□□ 1.38
SEMA4B-215ENST00000560089 PDE3AQ14432 1141 aa23.66■■□□□ 1.38
SEMA4B-215ENST00000560089 GPRASP1Q5JY77 1395 aa23.66■■□□□ 1.38
SEMA4B-215ENST00000560089 GTF2F1P35269 517 aaKnown RBP eCLIP23.65■■□□□ 1.38
SEMA4B-215ENST00000560089 ERVK-7P63135 1459 aa23.65■■□□□ 1.38
SEMA4B-215ENST00000560089 PDCL2Q8N4E4 241 aa23.65■■□□□ 1.38
SEMA4B-215ENST00000560089 PANK1Q8TE04 598 aa23.65■■□□□ 1.38
SEMA4B-215ENST00000560089 SLC52A1Q9NWF4 448 aa23.65■■□□□ 1.38
SEMA4B-215ENST00000560089 ZSCAN23Q3MJ62 389 aa23.64■■□□□ 1.37
SEMA4B-215ENST00000560089 SNX21Q969T3 373 aa23.64■■□□□ 1.37
SEMA4B-215ENST00000560089 KIF3AQ9Y496 699 aa23.64■■□□□ 1.37
SEMA4B-215ENST00000560089 FAM177BA6PVY3 158 aa23.63■■□□□ 1.37
SEMA4B-215ENST00000560089 PER1O15534 1290 aaPredicted RBP23.63■■□□□ 1.37
SEMA4B-215ENST00000560089 CAVIN1Q6NZI2 390 aaKnown RBP23.63■■□□□ 1.37
SEMA4B-215ENST00000560089 DNAJC2Q99543 621 aaKnown RBP23.63■■□□□ 1.37
SEMA4B-215ENST00000560089 FOXD4L1Q9NU39 408 aa23.63■■□□□ 1.37
SEMA4B-215ENST00000560089 MYO5BQ9ULV0 1848 aa23.62■■□□□ 1.37
SEMA4B-215ENST00000560089 SECISBP2LQ93073 1101 aaKnown RBP23.62■■□□□ 1.37
SEMA4B-215ENST00000560089 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
SEMA4B-215ENST00000560089 PIK3C2BO00750 1634 aa23.62■■□□□ 1.37
SEMA4B-215ENST00000560089 SSFA2P28290 1259 aa23.61■■□□□ 1.37
SEMA4B-215ENST00000560089 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms