RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
CTDSPL2-208ENST00000559793 MSH6P52701 1360 aa12.5□□□□□ -0.41
CTDSPL2-208ENST00000559793 ADGRB3O60242 1522 aa12.5□□□□□ -0.41
CTDSPL2-208ENST00000559793 CHD2O14647 1828 aaKnown RBP12.5□□□□□ -0.41
CTDSPL2-208ENST00000559793 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
CTDSPL2-208ENST00000559793 NKTRP30414 1462 aaKnown RBP12.49□□□□□ -0.41
CTDSPL2-208ENST00000559793 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
CTDSPL2-208ENST00000559793 HDGFP51858 240 aaKnown RBP12.48□□□□□ -0.41
CTDSPL2-208ENST00000559793 TBX22Q9Y458 520 aa12.48□□□□□ -0.41
CTDSPL2-208ENST00000559793 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
CTDSPL2-208ENST00000559793 ADGRL2O95490 1459 aa12.47□□□□□ -0.41
CTDSPL2-208ENST00000559793 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
CTDSPL2-208ENST00000559793 FAM50AQ14320 339 aaKnown RBP12.47□□□□□ -0.41
CTDSPL2-208ENST00000559793 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.41
CTDSPL2-208ENST00000559793 ANKRD50Q9ULJ7 1429 aa12.46□□□□□ -0.41
CTDSPL2-208ENST00000559793 RIMS2Q9UQ26 1411 aa12.46□□□□□ -0.41
CTDSPL2-208ENST00000559793 JCADQ9P266 1359 aa12.46□□□□□ -0.41
CTDSPL2-208ENST00000559793 PPP1R15AO75807 674 aaPredicted RBP12.46□□□□□ -0.41
CTDSPL2-208ENST00000559793 PTCD2Q8WV60 388 aaKnown RBP12.46□□□□□ -0.41
CTDSPL2-208ENST00000559793 TMEM131LA2VDJ0 1609 aa12.45□□□□□ -0.42
CTDSPL2-208ENST00000559793 POTEMA6NI47 508 aa12.45□□□□□ -0.42
CTDSPL2-208ENST00000559793 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
CTDSPL2-208ENST00000559793 NUTM2DQ5VT03 806 aaPredicted RBP12.45□□□□□ -0.42
CTDSPL2-208ENST00000559793 POTEGQ6S5H5 508 aa12.45□□□□□ -0.42
CTDSPL2-208ENST00000559793 MARVELD3Q96A59 401 aa12.45□□□□□ -0.42
CTDSPL2-208ENST00000559793 GCC2Q8IWJ2 1684 aa12.45□□□□□ -0.42
CTDSPL2-208ENST00000559793 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTDSPL2-208ENST00000559793 PCDHGA4Q9Y5G9 962 aa12.44□□□□□ -0.42
CTDSPL2-208ENST00000559793 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
CTDSPL2-208ENST00000559793 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
CTDSPL2-208ENST00000559793 ADAMTS13Q76LX8 1427 aa12.43□□□□□ -0.42
CTDSPL2-208ENST00000559793 NCOA3Q9Y6Q9 1424 aa12.43□□□□□ -0.42
CTDSPL2-208ENST00000559793 COL16A1Q07092 1604 aaPredicted RBP12.42□□□□□ -0.42
CTDSPL2-208ENST00000559793 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.424e-7■■■□□ 16.8
CTDSPL2-208ENST00000559793 SETD1AO15047 1707 aaKnown RBP12.42□□□□□ -0.42
CTDSPL2-208ENST00000559793 EMP3P54852 163 aa12.41□□□□□ -0.42
CTDSPL2-208ENST00000559793 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
CTDSPL2-208ENST00000559793 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.41□□□□□ -0.42
CTDSPL2-208ENST00000559793 SPATA31A6Q5VVP1 1343 aa12.4□□□□□ -0.42
CTDSPL2-208ENST00000559793 ATF3P18847 181 aa12.4□□□□□ -0.42
CTDSPL2-208ENST00000559793 AMOTL2Q9Y2J4 779 aa12.4□□□□□ -0.42
CTDSPL2-208ENST00000559793 LRP6O75581 1613 aa12.4□□□□□ -0.42
CTDSPL2-208ENST00000559793 E9PCH4 1651 aa12.39□□□□□ -0.43
CTDSPL2-208ENST00000559793 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
CTDSPL2-208ENST00000559793 PIK3R4Q99570 1358 aa12.39□□□□□ -0.43
CTDSPL2-208ENST00000559793 TBC1D12O60347 775 aa12.38□□□□□ -0.43
CTDSPL2-208ENST00000559793 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
CTDSPL2-208ENST00000559793 ZNF772Q68DY9 489 aaPredicted RBP12.38□□□□□ -0.43
CTDSPL2-208ENST00000559793 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
CTDSPL2-208ENST00000559793 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTDSPL2-208ENST00000559793 PTPRUQ92729 1446 aa12.37□□□□□ -0.43
CTDSPL2-208ENST00000559793 TRIM52Q96A61 297 aa12.37□□□□□ -0.43
CTDSPL2-208ENST00000559793 EMILIN3Q9NT22 766 aa12.37□□□□□ -0.43
CTDSPL2-208ENST00000559793 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
CTDSPL2-208ENST00000559793 UNC13BO14795 1591 aa12.37□□□□□ -0.43
CTDSPL2-208ENST00000559793 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
CTDSPL2-208ENST00000559793 NUDT7P0C024 238 aa12.36□□□□□ -0.43
CTDSPL2-208ENST00000559793 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
CTDSPL2-208ENST00000559793 NUTM2BA6NNL0 878 aaPredicted RBP12.35□□□□□ -0.43
CTDSPL2-208ENST00000559793 NUTM2EB1AL46 878 aaPredicted RBP12.35□□□□□ -0.43
CTDSPL2-208ENST00000559793 RXRBP28702 533 aa12.35□□□□□ -0.43
CTDSPL2-208ENST00000559793 NUTM2AQ8IVF1 878 aaPredicted RBP12.35□□□□□ -0.43
CTDSPL2-208ENST00000559793 SHPRHQ149N8 1683 aa12.35□□□□□ -0.43
CTDSPL2-208ENST00000559793 DIP2AQ14689 1571 aa12.35□□□□□ -0.43
CTDSPL2-208ENST00000559793 NUP155O75694 1391 aa12.34□□□□□ -0.43
CTDSPL2-208ENST00000559793 ROCK1Q13464 1354 aa12.34□□□□□ -0.43
CTDSPL2-208ENST00000559793 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
CTDSPL2-208ENST00000559793 IQGAP3Q86VI3 1631 aa12.33□□□□□ -0.43
CTDSPL2-208ENST00000559793 ERBB3P21860 1342 aa12.33□□□□□ -0.44
CTDSPL2-208ENST00000559793 TRPM2O94759 1503 aa12.32□□□□□ -0.44
CTDSPL2-208ENST00000559793 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
CTDSPL2-208ENST00000559793 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
CTDSPL2-208ENST00000559793 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
CTDSPL2-208ENST00000559793 ZNF316A6NFI3 1004 aaPredicted RBP12.31□□□□□ -0.44
CTDSPL2-208ENST00000559793 ITGAEP38570 1179 aa12.31□□□□□ -0.44
CTDSPL2-208ENST00000559793 E2F4Q16254 413 aa12.31□□□□□ -0.44
CTDSPL2-208ENST00000559793 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
CTDSPL2-208ENST00000559793 METP08581 1390 aa12.3□□□□□ -0.44
CTDSPL2-208ENST00000559793 NRXN3Q9Y4C0 1643 aa12.3□□□□□ -0.44
CTDSPL2-208ENST00000559793 SETD5Q9C0A6 1442 aa12.3□□□□□ -0.44
CTDSPL2-208ENST00000559793 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
CTDSPL2-208ENST00000559793 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
CTDSPL2-208ENST00000559793 LRRC59Q96AG4 307 aaKnown RBP12.3□□□□□ -0.44
CTDSPL2-208ENST00000559793 AFF2P51816 1311 aa12.3□□□□□ -0.44
CTDSPL2-208ENST00000559793 DCCP43146 1447 aa12.29□□□□□ -0.44
CTDSPL2-208ENST00000559793 MST1RQ04912 1400 aa12.29□□□□□ -0.44
CTDSPL2-208ENST00000559793 LHX6Q9UPM6 363 aa12.29□□□□□ -0.44
CTDSPL2-208ENST00000559793 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
CTDSPL2-208ENST00000559793 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
CTDSPL2-208ENST00000559793 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
CTDSPL2-208ENST00000559793 VARS2Q5ST30 1063 aaKnown RBP12.28□□□□□ -0.44
CTDSPL2-208ENST00000559793 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
CTDSPL2-208ENST00000559793 NHSL1Q5SYE7 1610 aa12.27□□□□□ -0.44
CTDSPL2-208ENST00000559793 CDK12Q9NYV4 1490 aaPredicted RBP12.27□□□□□ -0.45
CTDSPL2-208ENST00000559793 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
CTDSPL2-208ENST00000559793 C8orf37Q96NL8 207 aa12.26□□□□□ -0.45
CTDSPL2-208ENST00000559793 SPHKAPQ2M3C7 1700 aa12.25□□□□□ -0.45
CTDSPL2-208ENST00000559793 EVI5O60447 810 aa12.25□□□□□ -0.45
CTDSPL2-208ENST00000559793 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
CTDSPL2-208ENST00000559793 CDAN1Q8IWY9 1227 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms