RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 DISP2A7MBM2 1401 aa16.08■□□□□ 0.16
TRAF3-207ENST00000559734 ANKARQ7Z5J8 1434 aa16.08■□□□□ 0.16
TRAF3-207ENST00000559734 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
TRAF3-207ENST00000559734 YY1P25490 414 aa16.07■□□□□ 0.16
TRAF3-207ENST00000559734 MPHOSPH9Q99550 1183 aa16.07■□□□□ 0.16
TRAF3-207ENST00000559734 TRPM3Q9HCF6 1732 aaPredicted RBP16.07■□□□□ 0.16
TRAF3-207ENST00000559734 THSD7AQ9UPZ6 1657 aa16.06■□□□□ 0.16
TRAF3-207ENST00000559734 STRN4Q9NRL3 753 aa16.06■□□□□ 0.16
TRAF3-207ENST00000559734 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
TRAF3-207ENST00000559734 APBA3O96018 575 aa16.05■□□□□ 0.16
TRAF3-207ENST00000559734 ALS2Q96Q42 1657 aa16.05■□□□□ 0.16
TRAF3-207ENST00000559734 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
TRAF3-207ENST00000559734 NGDNQ8NEJ9 315 aaKnown RBP16.04■□□□□ 0.16
TRAF3-207ENST00000559734 CAMKK2Q96RR4 588 aa16.04■□□□□ 0.16
TRAF3-207ENST00000559734 CHRNA2Q15822 529 aa16.03■□□□□ 0.16
TRAF3-207ENST00000559734 FAM196AQ6ZSG2 479 aa16.03■□□□□ 0.16
TRAF3-207ENST00000559734 USP35Q9P2H5 1018 aa16.03■□□□□ 0.16
TRAF3-207ENST00000559734 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
TRAF3-207ENST00000559734 EIF3AQ14152 1382 aaKnown RBP16.02■□□□□ 0.16
TRAF3-207ENST00000559734 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.16
TRAF3-207ENST00000559734 PRR36Q9H6K5 1346 aa16.02■□□□□ 0.16
TRAF3-207ENST00000559734 PPP1R1BQ9UD71 204 aaPredicted RBP16.02■□□□□ 0.16
TRAF3-207ENST00000559734 DLC1Q96QB1 1528 aa16.02■□□□□ 0.15
TRAF3-207ENST00000559734 KIAA0232Q92628 1395 aa16.01■□□□□ 0.15
TRAF3-207ENST00000559734 PARD3Q8TEW0 1356 aa16■□□□□ 0.15
TRAF3-207ENST00000559734 TULP4Q9NRJ4 1543 aa15.99■□□□□ 0.15
TRAF3-207ENST00000559734 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
TRAF3-207ENST00000559734 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
TRAF3-207ENST00000559734 NBPF8Q3BBV2 869 aa15.99■□□□□ 0.15
TRAF3-207ENST00000559734 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
TRAF3-207ENST00000559734 CRYBG1Q9Y4K1 1723 aa15.99■□□□□ 0.15
TRAF3-207ENST00000559734 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
TRAF3-207ENST00000559734 WASLO00401 505 aaPredicted RBP15.98■□□□□ 0.15
TRAF3-207ENST00000559734 EVA1CP58658 441 aa15.98■□□□□ 0.15
TRAF3-207ENST00000559734 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
TRAF3-207ENST00000559734 NUP188Q5SRE5 1749 aa15.96■□□□□ 0.15
TRAF3-207ENST00000559734 RREB1Q92766 1687 aa15.95■□□□□ 0.14
TRAF3-207ENST00000559734 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
TRAF3-207ENST00000559734 ADGRB1O14514 1584 aa15.95■□□□□ 0.14
TRAF3-207ENST00000559734 PHRF1Q9P1Y6 1649 aaKnown RBP15.94■□□□□ 0.14
TRAF3-207ENST00000559734 SSH2Q76I76 1423 aa15.94■□□□□ 0.14
TRAF3-207ENST00000559734 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
TRAF3-207ENST00000559734 KCNQ2O43526 872 aa15.92■□□□□ 0.14
TRAF3-207ENST00000559734 LARP1Q6PKG0 1096 aaKnown RBP15.92■□□□□ 0.14
TRAF3-207ENST00000559734 BARGINQ6ZT62 677 aa15.92■□□□□ 0.14
TRAF3-207ENST00000559734 ATP7BP35670 1465 aa15.91■□□□□ 0.14
TRAF3-207ENST00000559734 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
TRAF3-207ENST00000559734 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
TRAF3-207ENST00000559734 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
TRAF3-207ENST00000559734 ITSN1Q15811 1721 aa15.9■□□□□ 0.14
TRAF3-207ENST00000559734 ZBTB7CA1YPR0 619 aa15.89■□□□□ 0.13
TRAF3-207ENST00000559734 DCAF11Q8TEB1 546 aa15.88■□□□□ 0.13
TRAF3-207ENST00000559734 CAMTA1Q9Y6Y1 1673 aa15.88■□□□□ 0.13
TRAF3-207ENST00000559734 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
TRAF3-207ENST00000559734 ABTB2Q8N961 1025 aa15.87■□□□□ 0.13
TRAF3-207ENST00000559734 CDK19Q9BWU1 502 aa15.86■□□□□ 0.13
TRAF3-207ENST00000559734 ACEP12821 1306 aa15.86■□□□□ 0.13
TRAF3-207ENST00000559734 ANO8Q9HCE9 1232 aaPredicted RBP15.84■□□□□ 0.13
TRAF3-207ENST00000559734 THRAP3Q9Y2W1 955 aaKnown RBP15.84■□□□□ 0.13
TRAF3-207ENST00000559734 OVOS2A0A0G2JMS6 1433 aa15.84■□□□□ 0.13
TRAF3-207ENST00000559734 OVOS2A0A0J9YW53 1432 aa15.84■□□□□ 0.13
TRAF3-207ENST00000559734 OVOS2Q6IE36 1432 aa15.84■□□□□ 0.13
TRAF3-207ENST00000559734 ARHGEF28Q8N1W1 1705 aaKnown RBP15.83■□□□□ 0.13
TRAF3-207ENST00000559734 ZBTB7AO95365 584 aa15.83■□□□□ 0.12
TRAF3-207ENST00000559734 POLR3AO14802 1390 aaPredicted RBP15.83■□□□□ 0.12
TRAF3-207ENST00000559734 CPDO75976 1380 aa15.83■□□□□ 0.12
TRAF3-207ENST00000559734 LMO7Q8WWI1 1683 aa15.83■□□□□ 0.12
TRAF3-207ENST00000559734 BCL11BQ9C0K0 894 aaPredicted RBP15.82■□□□□ 0.12
TRAF3-207ENST00000559734 COL5A2P05997 1499 aaPredicted RBP15.82■□□□□ 0.12
TRAF3-207ENST00000559734 PARP4Q9UKK3 1724 aaKnown RBP15.82■□□□□ 0.12
TRAF3-207ENST00000559734 C11orf95C9JLR9 678 aaPredicted RBP15.81■□□□□ 0.12
TRAF3-207ENST00000559734 USP19O94966 1318 aa15.81■□□□□ 0.12
TRAF3-207ENST00000559734 PDGFDQ9GZP0 370 aaPredicted RBP15.81■□□□□ 0.12
TRAF3-207ENST00000559734 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
TRAF3-207ENST00000559734 TOPAZ1Q8N9V7 1692 aa15.8■□□□□ 0.12
TRAF3-207ENST00000559734 CRB1P82279 1406 aa15.8■□□□□ 0.12
TRAF3-207ENST00000559734 DDB1Q16531 1140 aa15.8■□□□□ 0.12
TRAF3-207ENST00000559734 NLRP13Q86W25 1043 aa15.8■□□□□ 0.12
TRAF3-207ENST00000559734 GCP02774 474 aa15.79■□□□□ 0.12
TRAF3-207ENST00000559734 ZNF784Q8NCA9 323 aaPredicted RBP15.79■□□□□ 0.12
TRAF3-207ENST00000559734 ATF5Q9Y2D1 282 aaPredicted RBP15.79■□□□□ 0.12
TRAF3-207ENST00000559734 LRRC37A3O60309 1634 aa15.79■□□□□ 0.12
TRAF3-207ENST00000559734 CASZ1Q86V15 1759 aa15.78■□□□□ 0.12
TRAF3-207ENST00000559734 SENP3-EIF4A1A0A087X0R7 540 aa15.78■□□□□ 0.12
TRAF3-207ENST00000559734 PLSCR1O15162 318 aa15.78■□□□□ 0.12
TRAF3-207ENST00000559734 TOM1L2Q6ZVM7 507 aa15.78■□□□□ 0.12
TRAF3-207ENST00000559734 PTF1AQ7RTS3 328 aa15.78■□□□□ 0.12
TRAF3-207ENST00000559734 MYOM1P52179 1685 aa15.78■□□□□ 0.12
TRAF3-207ENST00000559734 PEAK1Q9H792 1746 aa15.77■□□□□ 0.12
TRAF3-207ENST00000559734 RAB3GAP2Q9H2M9 1393 aa15.77■□□□□ 0.12
TRAF3-207ENST00000559734 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
TRAF3-207ENST00000559734 SRPK2P78362 688 aaKnown RBP15.77■□□□□ 0.12
TRAF3-207ENST00000559734 STK32BQ9NY57 414 aa15.76■□□□□ 0.11
TRAF3-207ENST00000559734 RGPD3A6NKT7 1758 aaPredicted RBP15.76■□□□□ 0.11
TRAF3-207ENST00000559734 RGPD4Q7Z3J3 1758 aa15.76■□□□□ 0.11
TRAF3-207ENST00000559734 PPIP5K1Q6PFW1 1433 aa15.76■□□□□ 0.11
TRAF3-207ENST00000559734 PTGER2P43116 358 aa15.74■□□□□ 0.11
TRAF3-207ENST00000559734 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
TRAF3-207ENST00000559734 NLRP6P59044 892 aa15.73■□□□□ 0.11
TRAF3-207ENST00000559734 PROM2Q8N271 834 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms