RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 AKNAQ7Z591 1439 aa23.81■■□□□ 1.4
IGDCC4-204ENST00000559327 TPM3P06753 285 aa23.81■■□□□ 1.4
IGDCC4-204ENST00000559327 PDE3AQ14432 1141 aa23.81■■□□□ 1.4
IGDCC4-204ENST00000559327 SURF6O75683 361 aaKnown RBP23.81■■□□□ 1.4
IGDCC4-204ENST00000559327 CCDC61Q9Y6R9 512 aa23.81■■□□□ 1.4
IGDCC4-204ENST00000559327 NUDT16Q96DE0 195 aaKnown RBP23.8■■□□□ 1.4
IGDCC4-204ENST00000559327 SLC4A3P48751 1232 aa23.8■■□□□ 1.4
IGDCC4-204ENST00000559327 BECN2A8MW95 431 aa23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 GNAI2P04899 355 aa23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 CCDC47Q96A33 483 aaKnown RBP23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 SMC3Q9UQE7 1217 aa23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 CCT4P50991 539 aaKnown RBP23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 FOXD4L6Q3SYB3 417 aaPredicted RBP23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 FOXD4L3Q6VB84 417 aaPredicted RBP23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 PRDM11Q9NQV5 511 aa23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 TBC1D2BQ9UPU7 963 aa23.79■■□□□ 1.4
IGDCC4-204ENST00000559327 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
IGDCC4-204ENST00000559327 C22orf23Q9BZE7 217 aa23.78■■□□□ 1.4
IGDCC4-204ENST00000559327 PES1O00541 588 aaKnown RBP23.78■■□□□ 1.4
IGDCC4-204ENST00000559327 SLC4A2P04920 1241 aa23.78■■□□□ 1.4
IGDCC4-204ENST00000559327 FSD1Q9BTV5 496 aa23.78■■□□□ 1.4
IGDCC4-204ENST00000559327 CHMP5Q9NZZ3 219 aa23.78■■□□□ 1.4
IGDCC4-204ENST00000559327 CCDC27Q2M243 656 aa23.77■■□□□ 1.4
IGDCC4-204ENST00000559327 TSR1Q2NL82 804 aaKnown RBP23.77■■□□□ 1.4
IGDCC4-204ENST00000559327 KCNH5Q8NCM2 988 aa23.77■■□□□ 1.4
IGDCC4-204ENST00000559327 GCC1Q96CN9 775 aa23.77■■□□□ 1.4
IGDCC4-204ENST00000559327 NSD3Q9BZ95 1437 aa23.77■■□□□ 1.4
IGDCC4-204ENST00000559327 FCHSD2O94868 740 aa23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 HIP1O00291 1037 aa23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 PSMA5P28066 241 aa23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 CEP89Q96ST8 783 aa23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 NOB1Q9ULX3 412 aaKnown RBP23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 PPP6R1Q9UPN7 881 aa23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 HOOK1Q9UJC3 728 aaKnown RBP23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 TSR2Q969E8 191 aaKnown RBP23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 DENND4BO75064 1496 aaPredicted RBP23.76■■□□□ 1.39
IGDCC4-204ENST00000559327 NUCB2P80303 420 aa23.75■■□□□ 1.39
IGDCC4-204ENST00000559327 SAFBQ15424 915 aaKnown RBP eCLIP23.75■■□□□ 1.39
IGDCC4-204ENST00000559327 FAM135AQ9P2D6 1515 aa23.75■■□□□ 1.39
IGDCC4-204ENST00000559327 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
IGDCC4-204ENST00000559327 TPM1P09493 284 aa23.75■■□□□ 1.39
IGDCC4-204ENST00000559327 KLHL34Q8N239 644 aa23.75■■□□□ 1.39
IGDCC4-204ENST00000559327 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.75■■□□□ 1.39
IGDCC4-204ENST00000559327 DDX54Q8TDD1 881 aaKnown RBP23.74■■□□□ 1.39
IGDCC4-204ENST00000559327 NUTM2BA6NNL0 878 aaPredicted RBP23.74■■□□□ 1.39
IGDCC4-204ENST00000559327 NUTM2EB1AL46 878 aaPredicted RBP23.74■■□□□ 1.39
IGDCC4-204ENST00000559327 NUTM2AQ8IVF1 878 aaPredicted RBP23.74■■□□□ 1.39
IGDCC4-204ENST00000559327 RRS1Q15050 365 aaKnown RBP23.73■■□□□ 1.39
IGDCC4-204ENST00000559327 PHF23Q9BUL5 403 aaPredicted RBP23.73■■□□□ 1.39
IGDCC4-204ENST00000559327 FANCAO15360 1455 aa23.72■■□□□ 1.39
IGDCC4-204ENST00000559327 VPS37CA5D8V6 355 aaPredicted RBP23.72■■□□□ 1.39
IGDCC4-204ENST00000559327 FAM177BA6PVY3 158 aa23.72■■□□□ 1.39
IGDCC4-204ENST00000559327 SRCIN1Q9C0H9 1055 aa23.71■■□□□ 1.39
IGDCC4-204ENST00000559327 BICD2Q8TD16 824 aa23.71■■□□□ 1.39
IGDCC4-204ENST00000559327 WDR97A6NE52 1622 aa23.7■■□□□ 1.38
IGDCC4-204ENST00000559327 FYB1O15117 783 aa23.69■■□□□ 1.38
IGDCC4-204ENST00000559327 ZNF428Q96B54 188 aa23.69■■□□□ 1.38
IGDCC4-204ENST00000559327 FANCIQ9NVI1 1328 aa23.69■■□□□ 1.38
IGDCC4-204ENST00000559327 CNNM1Q9NRU3 951 aa23.69■■□□□ 1.38
IGDCC4-204ENST00000559327 DNAJC2Q99543 621 aaKnown RBP23.69■■□□□ 1.38
IGDCC4-204ENST00000559327 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
IGDCC4-204ENST00000559327 CCDC158Q5M9N0 1113 aa23.68■■□□□ 1.38
IGDCC4-204ENST00000559327 ANKRD20A12PQ8NF67 263 aa23.68■■□□□ 1.38
IGDCC4-204ENST00000559327 GNL3LQ9NVN8 582 aaKnown RBP23.68■■□□□ 1.38
IGDCC4-204ENST00000559327 SART3Q15020 963 aaKnown RBP23.68■■□□□ 1.38
IGDCC4-204ENST00000559327 NFE2L2Q16236 605 aa23.67■■□□□ 1.38
IGDCC4-204ENST00000559327 BRMS1Q9HCU9 246 aa23.67■■□□□ 1.38
IGDCC4-204ENST00000559327 BTBD11A6QL63 1104 aa23.67■■□□□ 1.38
IGDCC4-204ENST00000559327 XBP1P17861 261 aa23.67■■□□□ 1.38
IGDCC4-204ENST00000559327 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.67■■□□□ 1.38
IGDCC4-204ENST00000559327 WAPLQ7Z5K2 1190 aa23.66■■□□□ 1.38
IGDCC4-204ENST00000559327 TTC39AQ5SRH9 613 aa23.66■■□□□ 1.38
IGDCC4-204ENST00000559327 ATF7IPQ6VMQ6 1270 aa23.66■■□□□ 1.38
IGDCC4-204ENST00000559327 PDZRN3Q9UPQ7 1066 aa23.66■■□□□ 1.38
IGDCC4-204ENST00000559327 SF3B2Q13435 895 aaKnown RBP23.66■■□□□ 1.38
IGDCC4-204ENST00000559327 XPCQ01831 940 aaPredicted RBP23.65■■□□□ 1.38
IGDCC4-204ENST00000559327 HMGB2P26583 209 aaKnown RBP23.65■■□□□ 1.38
IGDCC4-204ENST00000559327 C1orf115Q9H7X2 142 aa23.65■■□□□ 1.38
IGDCC4-204ENST00000559327 GNAT3A8MTJ3 354 aa23.64■■□□□ 1.38
IGDCC4-204ENST00000559327 BCAR3O75815 825 aa23.64■■□□□ 1.38
IGDCC4-204ENST00000559327 SLC3A2P08195 630 aaKnown RBP23.64■■□□□ 1.38
IGDCC4-204ENST00000559327 AMER1Q5JTC6 1135 aaPredicted RBP23.64■■□□□ 1.37
IGDCC4-204ENST00000559327 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.63■■□□□ 1.37
IGDCC4-204ENST00000559327 CWC22Q9HCG8 908 aaKnown RBP23.63■■□□□ 1.37
IGDCC4-204ENST00000559327 CCDC73Q6ZRK6 1079 aa23.63■■□□□ 1.37
IGDCC4-204ENST00000559327 LRRCC1Q9C099 1032 aa23.63■■□□□ 1.37
IGDCC4-204ENST00000559327 DHX29Q7Z478 1369 aaKnown RBP23.62■■□□□ 1.37
IGDCC4-204ENST00000559327 ZC3H6P61129 1189 aaKnown RBP23.62■■□□□ 1.37
IGDCC4-204ENST00000559327 MYL6BP14649 208 aa23.62■■□□□ 1.37
IGDCC4-204ENST00000559327 CCDC43Q96MW1 224 aaKnown RBP23.62■■□□□ 1.37
IGDCC4-204ENST00000559327 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
IGDCC4-204ENST00000559327 GSE1Q14687 1217 aa23.61■■□□□ 1.37
IGDCC4-204ENST00000559327 MVPQ14764 893 aaKnown RBP23.61■■□□□ 1.37
IGDCC4-204ENST00000559327 MCM2P49736 904 aa23.61■■□□□ 1.37
IGDCC4-204ENST00000559327 IDI1Q13907 227 aa23.6■■□□□ 1.37
IGDCC4-204ENST00000559327 TMPOP42166 694 aaKnown RBP23.6■■□□□ 1.37
IGDCC4-204ENST00000559327 AMOTL2Q9Y2J4 779 aa23.6■■□□□ 1.37
IGDCC4-204ENST00000559327 FBXO31Q5XUX0 539 aaPredicted RBP23.6■■□□□ 1.37
IGDCC4-204ENST00000559327 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
IGDCC4-204ENST00000559327 GOLGA6L1Q8N7Z2 621 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms