RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TMEM132EQ6IEE7 984 aa7.79□□□□□ -1.16
SPG11-208ENST00000558155 ADGRF5Q8IZF2 1346 aa7.78□□□□□ -1.16
SPG11-208ENST00000558155 R3HDM1Q15032 1099 aaKnown RBP7.78□□□□□ -1.16
SPG11-208ENST00000558155 CLEC11AQ9Y240 323 aa7.78□□□□□ -1.16
SPG11-208ENST00000558155 SBNO1A3KN83 1393 aa7.77□□□□□ -1.17
SPG11-208ENST00000558155 ARHGEF10O15013 1369 aa7.77□□□□□ -1.17
SPG11-208ENST00000558155 SPDYE1Q8NFV5 336 aaPredicted RBP7.77□□□□□ -1.17
SPG11-208ENST00000558155 BTG4Q9NY30 223 aa7.77□□□□□ -1.17
SPG11-208ENST00000558155 SSUH2Q9Y2M2 353 aa7.77□□□□□ -1.17
SPG11-208ENST00000558155 USP32Q8NFA0 1604 aa7.77□□□□□ -1.17
SPG11-208ENST00000558155 TNS3Q68CZ2 1445 aa7.77□□□□□ -1.17
SPG11-208ENST00000558155 PPLO60437 1756 aa7.76□□□□□ -1.17
SPG11-208ENST00000558155 KIF1AQ12756 1690 aa7.76□□□□□ -1.17
SPG11-208ENST00000558155 ANKRD30BQ9BXX2 1392 aa7.76□□□□□ -1.17
SPG11-208ENST00000558155 PLEKHH1Q9ULM0 1364 aa7.76□□□□□ -1.17
SPG11-208ENST00000558155 NWD2Q9ULI1 1742 aa7.76□□□□□ -1.17
SPG11-208ENST00000558155 YY1P25490 414 aa7.76□□□□□ -1.17
SPG11-208ENST00000558155 PPARGC1BQ86YN6 1023 aaKnown RBP7.76□□□□□ -1.17
SPG11-208ENST00000558155 TECPR2O15040 1411 aa7.76□□□□□ -1.17
SPG11-208ENST00000558155 GABBR2O75899 941 aa7.75□□□□□ -1.17
SPG11-208ENST00000558155 EZH2Q15910 746 aaKnown RBP7.75□□□□□ -1.17
SPG11-208ENST00000558155 NBPF8Q3BBV2 869 aa7.75□□□□□ -1.17
SPG11-208ENST00000558155 NBPF14Q5TI25 921 aa7.75□□□□□ -1.17
SPG11-208ENST00000558155 FAM196AQ6ZSG2 479 aa7.75□□□□□ -1.17
SPG11-208ENST00000558155 PMFBP1Q8TBY8 1022 aa7.75□□□□□ -1.17
SPG11-208ENST00000558155 DHX57Q6P158 1386 aaKnown RBP7.74□□□□□ -1.17
SPG11-208ENST00000558155 APBA3O96018 575 aa7.74□□□□□ -1.17
SPG11-208ENST00000558155 FAM182BQ5T319 152 aa7.74□□□□□ -1.17
SPG11-208ENST00000558155 CAMKK2Q96RR4 588 aa7.74□□□□□ -1.17
SPG11-208ENST00000558155 C14orf93Q9H972 538 aaKnown RBP7.74□□□□□ -1.17
SPG11-208ENST00000558155 POGKQ9P215 609 aa7.74□□□□□ -1.17
SPG11-208ENST00000558155 YTHDC2Q9H6S0 1430 aaKnown RBP7.74□□□□□ -1.17
SPG11-208ENST00000558155 RRBP1Q9P2E9 1410 aaKnown RBP7.74□□□□□ -1.17
SPG11-208ENST00000558155 FMN2Q9NZ56 1722 aa7.74□□□□□ -1.17
SPG11-208ENST00000558155 SPATA31A5Q5VU36 1347 aa7.74□□□□□ -1.17
SPG11-208ENST00000558155 SPATA31A7Q8IWB4 1347 aa7.74□□□□□ -1.17
SPG11-208ENST00000558155 RGPD8O14715 1765 aaPredicted RBP7.74□□□□□ -1.17
SPG11-208ENST00000558155 GPRASP1Q5JY77 1395 aa7.73□□□□□ -1.17
SPG11-208ENST00000558155 RGPD1P0DJD0 1748 aa7.73□□□□□ -1.17
SPG11-208ENST00000558155 TRIM37O94972 964 aa7.73□□□□□ -1.17
SPG11-208ENST00000558155 SAFB2Q14151 953 aaKnown RBP eCLIP7.73□□□□□ -1.17
SPG11-208ENST00000558155 CHADLQ6NUI6 762 aa7.73□□□□□ -1.17
SPG11-208ENST00000558155 PLCH1Q4KWH8 1693 aa7.73□□□□□ -1.17
SPG11-208ENST00000558155 DISP2A7MBM2 1401 aa7.72□□□□□ -1.17
SPG11-208ENST00000558155 PDE3BQ13370 1112 aa7.72□□□□□ -1.17
SPG11-208ENST00000558155 PRAM1Q96QH2 718 aa7.72□□□□□ -1.17
SPG11-208ENST00000558155 ZNF692Q9BU19 519 aaPredicted RBP7.72□□□□□ -1.17
SPG11-208ENST00000558155 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
SPG11-208ENST00000558155 NRXN1Q9ULB1 1477 aa7.72□□□□□ -1.17
SPG11-208ENST00000558155 PARD3Q8TEW0 1356 aa7.71□□□□□ -1.17
SPG11-208ENST00000558155 PAK3O75914 559 aaPredicted RBP7.71□□□□□ -1.18
SPG11-208ENST00000558155 EVA1CP58658 441 aa7.71□□□□□ -1.18
SPG11-208ENST00000558155 CFAP70Q5T0N1 1121 aa7.71□□□□□ -1.18
SPG11-208ENST00000558155 NGDNQ8NEJ9 315 aaKnown RBP7.71□□□□□ -1.18
SPG11-208ENST00000558155 SPON1Q9HCB6 807 aa7.71□□□□□ -1.18
SPG11-208ENST00000558155 PRDM11Q9NQV5 511 aa7.71□□□□□ -1.18
SPG11-208ENST00000558155 SRCAPQ6ZRS2 3230 aa7.71□□□□□ -1.18
SPG11-208ENST00000558155 KNDC1Q76NI1 1749 aa7.71□□□□□ -1.18
SPG11-208ENST00000558155 COL14A1Q05707 1796 aaKnown RBP7.7□□□□□ -1.18
SPG11-208ENST00000558155 MPHOSPH9Q99550 1183 aa7.7□□□□□ -1.18
SPG11-208ENST00000558155 STRN4Q9NRL3 753 aa7.7□□□□□ -1.18
SPG11-208ENST00000558155 SPATA31A1Q5TZJ5 1347 aa7.7□□□□□ -1.18
SPG11-208ENST00000558155 PIK3C2GO75747 1445 aa7.69□□□□□ -1.18
SPG11-208ENST00000558155 SPATA31E1Q6ZUB1 1445 aa7.69□□□□□ -1.18
SPG11-208ENST00000558155 ANKARQ7Z5J8 1434 aa7.69□□□□□ -1.18
SPG11-208ENST00000558155 EP400Q96L91 3159 aa7.69□□□□□ -1.18
SPG11-208ENST00000558155 C11orf95C9JLR9 678 aaPredicted RBP7.69□□□□□ -1.18
SPG11-208ENST00000558155 KCNQ2O43526 872 aa7.69□□□□□ -1.18
SPG11-208ENST00000558155 LHX8Q68G74 356 aa7.69□□□□□ -1.18
SPG11-208ENST00000558155 ACIN1Q9UKV3 1341 aaKnown RBP7.69□□□□□ -1.18
SPG11-208ENST00000558155 EIF3AQ14152 1382 aaKnown RBP7.69□□□□□ -1.18
SPG11-208ENST00000558155 IFT172Q9UG01 1749 aa7.69□□□□□ -1.18
SPG11-208ENST00000558155 CHRNA2Q15822 529 aa7.68□□□□□ -1.18
SPG11-208ENST00000558155 BARGINQ6ZT62 677 aa7.68□□□□□ -1.18
SPG11-208ENST00000558155 USP35Q9P2H5 1018 aa7.68□□□□□ -1.18
SPG11-208ENST00000558155 NRAPQ86VF7 1730 aa7.68□□□□□ -1.18
SPG11-208ENST00000558155 ABCA3Q99758 1704 aa7.67□□□□□ -1.18
SPG11-208ENST00000558155 WASLO00401 505 aaPredicted RBP7.67□□□□□ -1.18
SPG11-208ENST00000558155 ZC3H6P61129 1189 aaKnown RBP7.67□□□□□ -1.18
SPG11-208ENST00000558155 HIRIP3Q9BW71 556 aaPredicted RBP7.67□□□□□ -1.18
SPG11-208ENST00000558155 TRAK1Q9UPV9 953 aa7.67□□□□□ -1.18
SPG11-208ENST00000558155 ADGRB2O60241 1585 aa7.67□□□□□ -1.18
SPG11-208ENST00000558155 POTEIP0CG38 1075 aa7.66□□□□□ -1.18
SPG11-208ENST00000558155 TCP11L2Q8N4U5 519 aa7.66□□□□□ -1.18
SPG11-208ENST00000558155 THRAP3Q9Y2W1 955 aaKnown RBP7.66□□□□□ -1.18
SPG11-208ENST00000558155 MINK1Q8N4C8 1332 aaPredicted RBP7.66□□□□□ -1.18
SPG11-208ENST00000558155 KIAA0232Q92628 1395 aa7.66□□□□□ -1.18
SPG11-208ENST00000558155 NINLQ9Y2I6 1382 aa7.66□□□□□ -1.18
SPG11-208ENST00000558155 TNS1Q9HBL0 1735 aaKnown RBP7.66□□□□□ -1.18
SPG11-208ENST00000558155 THSD7AQ9UPZ6 1657 aa7.65□□□□□ -1.18
SPG11-208ENST00000558155 TRPM3Q9HCF6 1732 aaPredicted RBP7.64□□□□□ -1.19
SPG11-208ENST00000558155 ALS2Q96Q42 1657 aa7.64□□□□□ -1.19
SPG11-208ENST00000558155 DLC1Q96QB1 1528 aa7.64□□□□□ -1.19
SPG11-208ENST00000558155 PRR36Q9H6K5 1346 aa7.64□□□□□ -1.19
SPG11-208ENST00000558155 PLSCR1O15162 318 aa7.64□□□□□ -1.19
SPG11-208ENST00000558155 NUTM2GQ5VZR2 741 aa7.64□□□□□ -1.19
SPG11-208ENST00000558155 NUDT16Q96DE0 195 aaKnown RBP7.64□□□□□ -1.19
SPG11-208ENST00000558155 STAC3Q96MF2 364 aa7.64□□□□□ -1.19
SPG11-208ENST00000558155 LARP1Q6PKG0 1096 aaKnown RBP7.63□□□□□ -1.19
SPG11-208ENST00000558155 ABTB2Q8N961 1025 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms