RNA–Protein interactions for RNA: ENST00000557648.1

MLH3-213, Transcript of mutL homolog 3, humanhuman

TSL 3

Gene MLH3, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-213ENST00000557648 WNK3Q9BYP7 1800 aa9.64□□□□□ -0.87
MLH3-213ENST00000557648 RXRBP28702 533 aa9.64□□□□□ -0.87
MLH3-213ENST00000557648 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
MLH3-213ENST00000557648 USP21Q9UK80 565 aa9.64□□□□□ -0.87
MLH3-213ENST00000557648 PIK3C2AO00443 1686 aa9.64□□□□□ -0.87
MLH3-213ENST00000557648 ACIN1Q9UKV3 1341 aaKnown RBP9.63□□□□□ -0.87
MLH3-213ENST00000557648 RALGAPBQ86X10 1494 aa9.63□□□□□ -0.87
MLH3-213ENST00000557648 MON2Q7Z3U7 1717 aa9.62□□□□□ -0.87
MLH3-213ENST00000557648 WASLO00401 505 aaPredicted RBP9.62□□□□□ -0.87
MLH3-213ENST00000557648 LMOD2Q6P5Q4 547 aa9.62□□□□□ -0.87
MLH3-213ENST00000557648 FNBP4Q8N3X1 1017 aaPredicted RBP9.62□□□□□ -0.87
MLH3-213ENST00000557648 L3MBTL2Q969R5 705 aa9.62□□□□□ -0.87
MLH3-213ENST00000557648 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
MLH3-213ENST00000557648 LMO7Q8WWI1 1683 aa9.61□□□□□ -0.87
MLH3-213ENST00000557648 CAPN15O75808 1086 aa9.61□□□□□ -0.87
MLH3-213ENST00000557648 RBM6P78332 1123 aaKnown RBP9.61□□□□□ -0.87
MLH3-213ENST00000557648 NEUROD1Q13562 356 aa9.61□□□□□ -0.87
MLH3-213ENST00000557648 NBPF8Q3BBV2 869 aa9.61□□□□□ -0.87
MLH3-213ENST00000557648 TNS1Q9HBL0 1735 aaKnown RBP9.61□□□□□ -0.87
MLH3-213ENST00000557648 THSD7AQ9UPZ6 1657 aa9.61□□□□□ -0.87
MLH3-213ENST00000557648 COL18A1P39060 1754 aa9.6□□□□□ -0.87
MLH3-213ENST00000557648 NUTM2GQ5VZR2 741 aa9.59□□□□□ -0.87
MLH3-213ENST00000557648 NUDT16Q96DE0 195 aaKnown RBP9.59□□□□□ -0.87
MLH3-213ENST00000557648 CDK19Q9BWU1 502 aa9.59□□□□□ -0.87
MLH3-213ENST00000557648 LTN1O94822 1766 aa9.59□□□□□ -0.87
MLH3-213ENST00000557648 DSG3P32926 999 aa9.58□□□□□ -0.88
MLH3-213ENST00000557648 PSME1Q06323 249 aa9.58□□□□□ -0.88
MLH3-213ENST00000557648 CABP2Q9NPB3 220 aa9.58□□□□□ -0.88
MLH3-213ENST00000557648 TRPC5Q9UL62 973 aaPredicted RBP9.58□□□□□ -0.88
MLH3-213ENST00000557648 PPIP5K1Q6PFW1 1433 aa9.57□□□□□ -0.88
MLH3-213ENST00000557648 ACEP12821 1306 aa9.56□□□□□ -0.88
MLH3-213ENST00000557648 RGPD1P0DJD0 1748 aa9.56□□□□□ -0.88
MLH3-213ENST00000557648 SBF2Q86WG5 1849 aa9.56□□□□□ -0.88
MLH3-213ENST00000557648 RGPD2P0DJD1 1756 aa9.56□□□□□ -0.88
MLH3-213ENST00000557648 POLR3AO14802 1390 aaPredicted RBP9.56□□□□□ -0.88
MLH3-213ENST00000557648 ARHGEF10O15013 1369 aa9.56□□□□□ -0.88
MLH3-213ENST00000557648 FAM83GA6ND36 823 aa9.56□□□□□ -0.88
MLH3-213ENST00000557648 NGDNQ8NEJ9 315 aaKnown RBP9.56□□□□□ -0.88
MLH3-213ENST00000557648 CENPJQ9HC77 1338 aaPredicted RBP9.56□□□□□ -0.88
MLH3-213ENST00000557648 USP54Q70EL1 1684 aa9.55□□□□□ -0.88
MLH3-213ENST00000557648 CAMTA1Q9Y6Y1 1673 aa9.55□□□□□ -0.88
MLH3-213ENST00000557648 EIF3AQ14152 1382 aaKnown RBP9.55□□□□□ -0.88
MLH3-213ENST00000557648 PAK3O75914 559 aaPredicted RBP9.55□□□□□ -0.88
MLH3-213ENST00000557648 HAP1P54257 671 aaPredicted RBP9.55□□□□□ -0.88
MLH3-213ENST00000557648 UNC5CLQ8IV45 518 aa9.55□□□□□ -0.88
MLH3-213ENST00000557648 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
MLH3-213ENST00000557648 GPRASP1Q5JY77 1395 aa9.54□□□□□ -0.88
MLH3-213ENST00000557648 CHRNA2Q15822 529 aa9.54□□□□□ -0.88
MLH3-213ENST00000557648 SLIT3O75094 1523 aa9.54□□□□□ -0.88
MLH3-213ENST00000557648 LRRC37A3O60309 1634 aa9.53□□□□□ -0.88
MLH3-213ENST00000557648 ROCK2O75116 1388 aaKnown RBP9.53□□□□□ -0.88
MLH3-213ENST00000557648 KIAA0232Q92628 1395 aa9.53□□□□□ -0.88
MLH3-213ENST00000557648 TRIM26Q12899 539 aaPredicted RBP9.53□□□□□ -0.88
MLH3-213ENST00000557648 FAM182BQ5T319 152 aa9.53□□□□□ -0.88
MLH3-213ENST00000557648 STAC3Q96MF2 364 aa9.53□□□□□ -0.88
MLH3-213ENST00000557648 BTG4Q9NY30 223 aa9.53□□□□□ -0.88
MLH3-213ENST00000557648 PARP4Q9UKK3 1724 aaKnown RBP9.53□□□□□ -0.88
MLH3-213ENST00000557648 ATAD2Q6PL18 1390 aa9.52□□□□□ -0.88
MLH3-213ENST00000557648 MYOM1P52179 1685 aa9.52□□□□□ -0.89
MLH3-213ENST00000557648 EP400Q96L91 3159 aa9.52□□□□□ -0.89
MLH3-213ENST00000557648 USP6P35125 1406 aa9.52□□□□□ -0.89
MLH3-213ENST00000557648 SRPK2P78362 688 aaKnown RBP9.52□□□□□ -0.89
MLH3-213ENST00000557648 CD163L1Q9NR16 1453 aa9.52□□□□□ -0.89
MLH3-213ENST00000557648 RREB1Q92766 1687 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 SSH2Q76I76 1423 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 PLEKHG3A1L390 1219 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
MLH3-213ENST00000557648 VPS72Q15906 364 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 SEPT12Q8IYM1 358 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 CCDC9Q9Y3X0 531 aaKnown RBP9.51□□□□□ -0.89
MLH3-213ENST00000557648 KIF20BQ96Q89 1820 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 NUP188Q5SRE5 1749 aa9.51□□□□□ -0.89
MLH3-213ENST00000557648 FAM98CQ17RN3 349 aaKnown RBP9.5□□□□□ -0.89
MLH3-213ENST00000557648 CCDC61Q9Y6R9 512 aa9.5□□□□□ -0.89
MLH3-213ENST00000557648 NFAT5O94916 1531 aa9.5□□□□□ -0.89
MLH3-213ENST00000557648 USP19O94966 1318 aa9.5□□□□□ -0.89
MLH3-213ENST00000557648 DEFB132Q7Z7B7 95 aa9.49□□□□□ -0.89
MLH3-213ENST00000557648 CABP1Q9NZU7 370 aa9.49□□□□□ -0.89
MLH3-213ENST00000557648 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
MLH3-213ENST00000557648 COL5A2P05997 1499 aaPredicted RBP9.48□□□□□ -0.89
MLH3-213ENST00000557648 PRDM11Q9NQV5 511 aa9.48□□□□□ -0.89
MLH3-213ENST00000557648 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
MLH3-213ENST00000557648 SPATA31A5Q5VU36 1347 aa9.48□□□□□ -0.89
MLH3-213ENST00000557648 SPATA31A7Q8IWB4 1347 aa9.48□□□□□ -0.89
MLH3-213ENST00000557648 TONSLQ96HA7 1378 aa9.48□□□□□ -0.89
MLH3-213ENST00000557648 SHANK3Q9BYB0 1731 aa9.48□□□□□ -0.89
MLH3-213ENST00000557648 A0A0G2JS52 829 aa9.47□□□□□ -0.89
MLH3-213ENST00000557648 ZBTB7CA1YPR0 619 aa9.47□□□□□ -0.89
MLH3-213ENST00000557648 MYT1Q01538 1121 aa9.47□□□□□ -0.89
MLH3-213ENST00000557648 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
MLH3-213ENST00000557648 CPSF1Q10570 1443 aaKnown RBP9.47□□□□□ -0.89
MLH3-213ENST00000557648 USP35Q9P2H5 1018 aa9.46□□□□□ -0.9
MLH3-213ENST00000557648 BLMP54132 1417 aaPredicted RBP9.46□□□□□ -0.9
MLH3-213ENST00000557648 SOX12O15370 315 aa9.45□□□□□ -0.9
MLH3-213ENST00000557648 ONECUT3O60422 494 aaPredicted RBP9.45□□□□□ -0.9
MLH3-213ENST00000557648 LARP1Q6PKG0 1096 aaKnown RBP9.45□□□□□ -0.9
MLH3-213ENST00000557648 KRT27Q7Z3Y8 459 aa9.45□□□□□ -0.9
MLH3-213ENST00000557648 CARD11Q9BXL7 1154 aa9.45□□□□□ -0.9
MLH3-213ENST00000557648 SPATA31A1Q5TZJ5 1347 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms