RNA–Protein interactions for RNA: ENST00000557608.1

RGMA-212, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 4

Gene RGMA, Length 473 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-212ENST00000557608 CABP1Q9NZU7 370 aa27.54■■■□□ 2
RGMA-212ENST00000557608 BRD4O60885 1362 aaPredicted RBP27.52■■■□□ 2
RGMA-212ENST00000557608 USP21Q9UK80 565 aa27.51■■□□□ 1.99
RGMA-212ENST00000557608 SLC24A1O60721 1099 aa27.5■■□□□ 1.99
RGMA-212ENST00000557608 CRYBG1Q9Y4K1 1723 aa27.5■■□□□ 1.99
RGMA-212ENST00000557608 ST20-MTHFSA0A0A6YYL1 179 aa27.49■■□□□ 1.99
RGMA-212ENST00000557608 PLEKHG5O94827 1062 aa27.49■■□□□ 1.99
RGMA-212ENST00000557608 QTRT2Q9H974 415 aaKnown RBP27.49■■□□□ 1.99
RGMA-212ENST00000557608 USP47Q96K76 1375 aa27.48■■□□□ 1.99
RGMA-212ENST00000557608 RXRBP28702 533 aa27.48■■□□□ 1.99
RGMA-212ENST00000557608 TESK2Q96S53 571 aa27.48■■□□□ 1.99
RGMA-212ENST00000557608 USP6P35125 1406 aa27.47■■□□□ 1.99
RGMA-212ENST00000557608 BCL9LQ86UU0 1499 aa27.46■■□□□ 1.99
RGMA-212ENST00000557608 PUS7Q96PZ0 661 aaKnown RBP27.46■■□□□ 1.99
RGMA-212ENST00000557608 SLIT2O94813 1529 aa27.46■■□□□ 1.99
RGMA-212ENST00000557608 AKAP12Q02952 1782 aa27.45■■□□□ 1.99
RGMA-212ENST00000557608 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.45■■□□□ 1.99
RGMA-212ENST00000557608 TRPC5Q9UL62 973 aaPredicted RBP27.45■■□□□ 1.98
RGMA-212ENST00000557608 CDK12Q9NYV4 1490 aaPredicted RBP27.44■■□□□ 1.98
RGMA-212ENST00000557608 RBM6P78332 1123 aaKnown RBP27.44■■□□□ 1.98
RGMA-212ENST00000557608 ABTB2Q8N961 1025 aa27.44■■□□□ 1.98
RGMA-212ENST00000557608 ZNF692Q9BU19 519 aaPredicted RBP27.44■■□□□ 1.98
RGMA-212ENST00000557608 NWD2Q9ULI1 1742 aa27.43■■□□□ 1.98
RGMA-212ENST00000557608 ATRNO75882 1429 aa27.42■■□□□ 1.98
RGMA-212ENST00000557608 PLCH1Q4KWH8 1693 aa27.42■■□□□ 1.98
RGMA-212ENST00000557608 CPSF1Q10570 1443 aaKnown RBP27.41■■□□□ 1.98
RGMA-212ENST00000557608 SSH2Q76I76 1423 aa27.41■■□□□ 1.98
RGMA-212ENST00000557608 PHRF1Q9P1Y6 1649 aaKnown RBP27.41■■□□□ 1.98
RGMA-212ENST00000557608 NUTM2GQ5VZR2 741 aa27.4■■□□□ 1.98
RGMA-212ENST00000557608 UNC5CLQ8IV45 518 aa27.4■■□□□ 1.98
RGMA-212ENST00000557608 COL14A1Q05707 1796 aaKnown RBP27.39■■□□□ 1.98
RGMA-212ENST00000557608 FAM83GA6ND36 823 aa27.38■■□□□ 1.97
RGMA-212ENST00000557608 NLRP13Q86W25 1043 aa27.38■■□□□ 1.97
RGMA-212ENST00000557608 MON2Q7Z3U7 1717 aa27.37■■□□□ 1.97
RGMA-212ENST00000557608 USP19O94966 1318 aa27.37■■□□□ 1.97
RGMA-212ENST00000557608 KTN1Q86UP2 1357 aaKnown RBP27.36■■□□□ 1.97
RGMA-212ENST00000557608 TMC1Q8TDI8 760 aa27.36■■□□□ 1.97
RGMA-212ENST00000557608 NINLQ9Y2I6 1382 aa27.35■■□□□ 1.97
RGMA-212ENST00000557608 NRKQ7Z2Y5 1582 aa27.35■■□□□ 1.97
RGMA-212ENST00000557608 TMF1P82094 1093 aa27.35■■□□□ 1.97
RGMA-212ENST00000557608 PIK3C2AO00443 1686 aa27.35■■□□□ 1.97
RGMA-212ENST00000557608 PRDM11Q9NQV5 511 aa27.34■■□□□ 1.97
RGMA-212ENST00000557608 TTC21BQ7Z4L5 1316 aa27.34■■□□□ 1.97
RGMA-212ENST00000557608 TTC21AQ8NDW8 1320 aa27.34■■□□□ 1.97
RGMA-212ENST00000557608 CD163L1Q9NR16 1453 aa27.33■■□□□ 1.97
RGMA-212ENST00000557608 SLC12A5Q9H2X9 1139 aa27.33■■□□□ 1.97
RGMA-212ENST00000557608 NLRP6P59044 892 aa27.32■■□□□ 1.96
RGMA-212ENST00000557608 HDGFL2Q7Z4V5 671 aaPredicted RBP27.32■■□□□ 1.96
RGMA-212ENST00000557608 GJD4Q96KN9 370 aaPredicted RBP27.32■■□□□ 1.96
RGMA-212ENST00000557608 TERF2IPQ9NYB0 399 aa27.32■■□□□ 1.96
RGMA-212ENST00000557608 KIAA0232Q92628 1395 aa27.32■■□□□ 1.96
RGMA-212ENST00000557608 RGS12O14924 1447 aa27.32■■□□□ 1.96
RGMA-212ENST00000557608 NRAPQ86VF7 1730 aa27.31■■□□□ 1.96
RGMA-212ENST00000557608 VPS72Q15906 364 aa27.3■■□□□ 1.96
RGMA-212ENST00000557608 BTG4Q9NY30 223 aa27.3■■□□□ 1.96
RGMA-212ENST00000557608 GCP02774 474 aa27.29■■□□□ 1.96
RGMA-212ENST00000557608 CDCA8Q53HL2 280 aa27.29■■□□□ 1.96
RGMA-212ENST00000557608 CPDO75976 1380 aa27.29■■□□□ 1.96
RGMA-212ENST00000557608 SLIT3O75094 1523 aa27.29■■□□□ 1.96
RGMA-212ENST00000557608 ZC3H6P61129 1189 aaKnown RBP27.28■■□□□ 1.96
RGMA-212ENST00000557608 A0A1W2PP64 1363 aa27.27■■□□□ 1.96
RGMA-212ENST00000557608 GLI3P10071 1580 aa27.26■■□□□ 1.96
RGMA-212ENST00000557608 EDC4Q6P2E9 1401 aaKnown RBP27.26■■□□□ 1.95
RGMA-212ENST00000557608 CHRNA2Q15822 529 aa27.24■■□□□ 1.95
RGMA-212ENST00000557608 EIF4G2P78344 907 aaKnown RBP eCLIP27.23■■□□□ 1.95
RGMA-212ENST00000557608 USP54Q70EL1 1684 aa27.22■■□□□ 1.95
RGMA-212ENST00000557608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.22■■□□□ 1.95
RGMA-212ENST00000557608 CCDC9Q9Y3X0 531 aaKnown RBP27.22■■□□□ 1.95
RGMA-212ENST00000557608 USP31Q70CQ4 1352 aa27.21■■□□□ 1.95
RGMA-212ENST00000557608 ANKRD36BQ8N2N9 1353 aa27.21■■□□□ 1.95
RGMA-212ENST00000557608 LMO7Q8WWI1 1683 aa27.21■■□□□ 1.95
RGMA-212ENST00000557608 KCNH5Q8NCM2 988 aa27.2■■□□□ 1.94
RGMA-212ENST00000557608 HSPA5P11021 654 aaKnown RBP27.17■■□□□ 1.94
RGMA-212ENST00000557608 NME9Q86XW9 330 aa27.17■■□□□ 1.94
RGMA-212ENST00000557608 CAMTA1Q9Y6Y1 1673 aa27.17■■□□□ 1.94
RGMA-212ENST00000557608 AATKQ6ZMQ8 1374 aa27.16■■□□□ 1.94
RGMA-212ENST00000557608 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
RGMA-212ENST00000557608 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
RGMA-212ENST00000557608 ONECUT3O60422 494 aaPredicted RBP27.15■■□□□ 1.94
RGMA-212ENST00000557608 NFAT5O94916 1531 aa27.15■■□□□ 1.94
RGMA-212ENST00000557608 MYOM1P52179 1685 aa27.14■■□□□ 1.94
RGMA-212ENST00000557608 EVA1CP58658 441 aa27.13■■□□□ 1.93
RGMA-212ENST00000557608 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
RGMA-212ENST00000557608 ZRANB1Q9UGI0 708 aa27.13■■□□□ 1.93
RGMA-212ENST00000557608 COL18A1P39060 1754 aa27.12■■□□□ 1.93
RGMA-212ENST00000557608 ARHGEF25Q86VW2 580 aa27.12■■□□□ 1.93
RGMA-212ENST00000557608 SEPT12Q8IYM1 358 aa27.11■■□□□ 1.93
RGMA-212ENST00000557608 COL5A2P05997 1499 aaPredicted RBP27.11■■□□□ 1.93
RGMA-212ENST00000557608 OVOS2A0A0J9YW53 1432 aa27.1■■□□□ 1.93
RGMA-212ENST00000557608 OVOS2Q6IE36 1432 aa27.1■■□□□ 1.93
RGMA-212ENST00000557608 ZBTB7CA1YPR0 619 aa27.1■■□□□ 1.93
RGMA-212ENST00000557608 SOX12O15370 315 aa27.1■■□□□ 1.93
RGMA-212ENST00000557608 UPF1Q92900 1129 aaKnown RBP eCLIP27.1■■□□□ 1.93
RGMA-212ENST00000557608 BRWD3Q6RI45 1802 aa27.1■■□□□ 1.93
RGMA-212ENST00000557608 SPATA31A1Q5TZJ5 1347 aa27.1■■□□□ 1.93
RGMA-212ENST00000557608 ABCC6O95255 1503 aa27.08■■□□□ 1.93
RGMA-212ENST00000557608 FAM98CQ17RN3 349 aaKnown RBP27.08■■□□□ 1.93
RGMA-212ENST00000557608 LARP1Q6PKG0 1096 aaKnown RBP27.06■■□□□ 1.92
RGMA-212ENST00000557608 THSD7AQ9UPZ6 1657 aa27.05■■□□□ 1.92
RGMA-212ENST00000557608 LTN1O94822 1766 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms