RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 PRAM1Q96QH2 718 aa12.07□□□□□ -0.48
PCNX1-215ENST00000557428 PPP1R1BQ9UD71 204 aaPredicted RBP12.07□□□□□ -0.48
PCNX1-215ENST00000557428 RREB1Q92766 1687 aa12.06□□□□□ -0.48
PCNX1-215ENST00000557428 NUP188Q5SRE5 1749 aa12.06□□□□□ -0.48
PCNX1-215ENST00000557428 DISP2A7MBM2 1401 aa12.06□□□□□ -0.48
PCNX1-215ENST00000557428 PAK3O75914 559 aaPredicted RBP12.06□□□□□ -0.48
PCNX1-215ENST00000557428 POGKQ9P215 609 aa12.06□□□□□ -0.48
PCNX1-215ENST00000557428 SPATA31A5Q5VU36 1347 aa12.06□□□□□ -0.48
PCNX1-215ENST00000557428 SPATA31A7Q8IWB4 1347 aa12.06□□□□□ -0.48
PCNX1-215ENST00000557428 CRYBG1Q9Y4K1 1723 aa12.06□□□□□ -0.48
PCNX1-215ENST00000557428 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
PCNX1-215ENST00000557428 SPATA31E1Q6ZUB1 1445 aa12.05□□□□□ -0.48
PCNX1-215ENST00000557428 APBA3O96018 575 aa12.05□□□□□ -0.48
PCNX1-215ENST00000557428 PRDM11Q9NQV5 511 aa12.05□□□□□ -0.48
PCNX1-215ENST00000557428 STRN4Q9NRL3 753 aa12.05□□□□□ -0.48
PCNX1-215ENST00000557428 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
PCNX1-215ENST00000557428 DCAF8L1A6NGE4 600 aa12.04□□□□□ -0.48
PCNX1-215ENST00000557428 HIRIP3Q9BW71 556 aaPredicted RBP12.04□□□□□ -0.48
PCNX1-215ENST00000557428 USP35Q9P2H5 1018 aa12.04□□□□□ -0.48
PCNX1-215ENST00000557428 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
PCNX1-215ENST00000557428 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
PCNX1-215ENST00000557428 CFAP70Q5T0N1 1121 aa12.03□□□□□ -0.48
PCNX1-215ENST00000557428 PHRF1Q9P1Y6 1649 aaKnown RBP12.03□□□□□ -0.48
PCNX1-215ENST00000557428 CHRNA2Q15822 529 aa12.02□□□□□ -0.49
PCNX1-215ENST00000557428 FAM196AQ6ZSG2 479 aa12.02□□□□□ -0.49
PCNX1-215ENST00000557428 CAMKK2Q96RR4 588 aa12.02□□□□□ -0.49
PCNX1-215ENST00000557428 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.49
PCNX1-215ENST00000557428 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
PCNX1-215ENST00000557428 NBPF8Q3BBV2 869 aa12.01□□□□□ -0.49
PCNX1-215ENST00000557428 NBPF14Q5TI25 921 aa12.01□□□□□ -0.49
PCNX1-215ENST00000557428 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
PCNX1-215ENST00000557428 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
PCNX1-215ENST00000557428 ITSN1Q15811 1721 aa12□□□□□ -0.49
PCNX1-215ENST00000557428 PDE3BQ13370 1112 aa12□□□□□ -0.49
PCNX1-215ENST00000557428 SIRT1Q96EB6 747 aa12□□□□□ -0.49
PCNX1-215ENST00000557428 C14orf93Q9H972 538 aaKnown RBP12□□□□□ -0.49
PCNX1-215ENST00000557428 SPATA31A1Q5TZJ5 1347 aa12□□□□□ -0.49
PCNX1-215ENST00000557428 PARD3Q8TEW0 1356 aa12□□□□□ -0.49
PCNX1-215ENST00000557428 KIAA0232Q92628 1395 aa12□□□□□ -0.49
PCNX1-215ENST00000557428 TULP4Q9NRJ4 1543 aa12□□□□□ -0.49
PCNX1-215ENST00000557428 NUTM2GQ5VZR2 741 aa11.99□□□□□ -0.49
PCNX1-215ENST00000557428 TRAK1Q9UPV9 953 aa11.99□□□□□ -0.49
PCNX1-215ENST00000557428 EIF3AQ14152 1382 aaKnown RBP11.99□□□□□ -0.49
PCNX1-215ENST00000557428 DLC1Q96QB1 1528 aa11.99□□□□□ -0.49
PCNX1-215ENST00000557428 EVA1CP58658 441 aa11.98□□□□□ -0.49
PCNX1-215ENST00000557428 ZC3H6P61129 1189 aaKnown RBP11.98□□□□□ -0.49
PCNX1-215ENST00000557428 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
PCNX1-215ENST00000557428 SPON1Q9HCB6 807 aa11.98□□□□□ -0.49
PCNX1-215ENST00000557428 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
PCNX1-215ENST00000557428 NINLQ9Y2I6 1382 aa11.96□□□□□ -0.49
PCNX1-215ENST00000557428 KCNQ2O43526 872 aa11.96□□□□□ -0.49
PCNX1-215ENST00000557428 NRKQ7Z2Y5 1582 aa11.96□□□□□ -0.5
PCNX1-215ENST00000557428 SSH2Q76I76 1423 aa11.95□□□□□ -0.5
PCNX1-215ENST00000557428 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
PCNX1-215ENST00000557428 ATP7BP35670 1465 aa11.94□□□□□ -0.5
PCNX1-215ENST00000557428 ADGRB1O14514 1584 aa11.93□□□□□ -0.5
PCNX1-215ENST00000557428 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
PCNX1-215ENST00000557428 LARP1Q6PKG0 1096 aaKnown RBP11.93□□□□□ -0.5
PCNX1-215ENST00000557428 PARP4Q9UKK3 1724 aaKnown RBP11.93□□□□□ -0.5
PCNX1-215ENST00000557428 MYOM1P52179 1685 aa11.93□□□□□ -0.5
PCNX1-215ENST00000557428 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
PCNX1-215ENST00000557428 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
PCNX1-215ENST00000557428 CASZ1Q86V15 1759 aa11.92□□□□□ -0.5
PCNX1-215ENST00000557428 SBF2Q86WG5 1849 aa11.91□□□□□ -0.5
PCNX1-215ENST00000557428 SENP3-EIF4A1A0A087X0R7 540 aa11.91□□□□□ -0.5
PCNX1-215ENST00000557428 BARGINQ6ZT62 677 aa11.91□□□□□ -0.5
PCNX1-215ENST00000557428 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
PCNX1-215ENST00000557428 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.5
PCNX1-215ENST00000557428 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.5
PCNX1-215ENST00000557428 LMO7Q8WWI1 1683 aa11.9□□□□□ -0.5
PCNX1-215ENST00000557428 AKAP12Q02952 1782 aa11.9□□□□□ -0.51
PCNX1-215ENST00000557428 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
PCNX1-215ENST00000557428 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
PCNX1-215ENST00000557428 OVOS2A0A0J9YW53 1432 aa11.89□□□□□ -0.51
PCNX1-215ENST00000557428 OVOS2Q6IE36 1432 aa11.89□□□□□ -0.51
PCNX1-215ENST00000557428 ZBTB7AO95365 584 aa11.89□□□□□ -0.51
PCNX1-215ENST00000557428 NUDT16Q96DE0 195 aaKnown RBP11.89□□□□□ -0.51
PCNX1-215ENST00000557428 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
PCNX1-215ENST00000557428 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
PCNX1-215ENST00000557428 TOPAZ1Q8N9V7 1692 aa11.89□□□□□ -0.51
PCNX1-215ENST00000557428 CHD4Q14839 1912 aa11.88□□□□□ -0.51
PCNX1-215ENST00000557428 ZNF784Q8NCA9 323 aaPredicted RBP11.88□□□□□ -0.51
PCNX1-215ENST00000557428 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
PCNX1-215ENST00000557428 PEAK1Q9H792 1746 aa11.87□□□□□ -0.51
PCNX1-215ENST00000557428 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
PCNX1-215ENST00000557428 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
PCNX1-215ENST00000557428 ACEP12821 1306 aa11.86□□□□□ -0.51
PCNX1-215ENST00000557428 PDGFDQ9GZP0 370 aaPredicted RBP11.86□□□□□ -0.51
PCNX1-215ENST00000557428 COL5A2P05997 1499 aaPredicted RBP11.86□□□□□ -0.51
PCNX1-215ENST00000557428 DCAF11Q8TEB1 546 aa11.85□□□□□ -0.51
PCNX1-215ENST00000557428 CDK19Q9BWU1 502 aa11.85□□□□□ -0.51
PCNX1-215ENST00000557428 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
PCNX1-215ENST00000557428 CRB1P82279 1406 aa11.85□□□□□ -0.51
PCNX1-215ENST00000557428 DDB1Q16531 1140 aa11.84□□□□□ -0.51
PCNX1-215ENST00000557428 RNF216Q9NWF9 866 aaPredicted RBP11.84□□□□□ -0.51
PCNX1-215ENST00000557428 CPDO75976 1380 aa11.83□□□□□ -0.52
PCNX1-215ENST00000557428 C11orf95C9JLR9 678 aaPredicted RBP11.83□□□□□ -0.52
PCNX1-215ENST00000557428 PTF1AQ7RTS3 328 aa11.83□□□□□ -0.52
PCNX1-215ENST00000557428 FHDC1Q9C0D6 1143 aaPredicted RBP11.83□□□□□ -0.52
PCNX1-215ENST00000557428 STK32BQ9NY57 414 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms