RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 DLC1Q96QB1 1528 aa18.14■□□□□ 0.49
RTN1-208ENST00000557422 ACIN1Q9UKV3 1341 aaKnown RBP18.14■□□□□ 0.49
RTN1-208ENST00000557422 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
RTN1-208ENST00000557422 TNS1Q9HBL0 1735 aaKnown RBP18.13■□□□□ 0.49
RTN1-208ENST00000557422 CAMKK2Q96RR4 588 aa18.13■□□□□ 0.49
RTN1-208ENST00000557422 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
RTN1-208ENST00000557422 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
RTN1-208ENST00000557422 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
RTN1-208ENST00000557422 PRR36Q9H6K5 1346 aa18.12■□□□□ 0.49
RTN1-208ENST00000557422 MINK1Q8N4C8 1332 aaPredicted RBP18.1■□□□□ 0.49
RTN1-208ENST00000557422 TRIM37O94972 964 aa18.1■□□□□ 0.49
RTN1-208ENST00000557422 FAM196AQ6ZSG2 479 aa18.1■□□□□ 0.49
RTN1-208ENST00000557422 CRYBG1Q9Y4K1 1723 aa18.09■□□□□ 0.49
RTN1-208ENST00000557422 SPATA31A1Q5TZJ5 1347 aa18.09■□□□□ 0.49
RTN1-208ENST00000557422 PAK3O75914 559 aaPredicted RBP18.09■□□□□ 0.49
RTN1-208ENST00000557422 NGDNQ8NEJ9 315 aaKnown RBP18.09■□□□□ 0.49
RTN1-208ENST00000557422 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
RTN1-208ENST00000557422 EIF3AQ14152 1382 aaKnown RBP18.08■□□□□ 0.49
RTN1-208ENST00000557422 WASLO00401 505 aaPredicted RBP18.07■□□□□ 0.48
RTN1-208ENST00000557422 APBA3O96018 575 aa18.07■□□□□ 0.48
RTN1-208ENST00000557422 ADGRB1O14514 1584 aa18.07■□□□□ 0.48
RTN1-208ENST00000557422 TULP4Q9NRJ4 1543 aa18.07■□□□□ 0.48
RTN1-208ENST00000557422 KIAA0232Q92628 1395 aa18.06■□□□□ 0.48
RTN1-208ENST00000557422 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
RTN1-208ENST00000557422 PARD3Q8TEW0 1356 aa18.05■□□□□ 0.48
RTN1-208ENST00000557422 STRN4Q9NRL3 753 aa18.05■□□□□ 0.48
RTN1-208ENST00000557422 YY1P25490 414 aa18.02■□□□□ 0.48
RTN1-208ENST00000557422 ZC3H6P61129 1189 aaKnown RBP18.02■□□□□ 0.48
RTN1-208ENST00000557422 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
RTN1-208ENST00000557422 USP35Q9P2H5 1018 aa18.01■□□□□ 0.47
RTN1-208ENST00000557422 PDE3BQ13370 1112 aa18■□□□□ 0.47
RTN1-208ENST00000557422 NUDT16Q96DE0 195 aaKnown RBP18■□□□□ 0.47
RTN1-208ENST00000557422 RREB1Q92766 1687 aa17.99■□□□□ 0.47
RTN1-208ENST00000557422 EVA1CP58658 441 aa17.99■□□□□ 0.47
RTN1-208ENST00000557422 NBPF8Q3BBV2 869 aa17.99■□□□□ 0.47
RTN1-208ENST00000557422 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
RTN1-208ENST00000557422 NUTM2GQ5VZR2 741 aa17.99■□□□□ 0.47
RTN1-208ENST00000557422 KDM2AQ9Y2K7 1162 aa17.99■□□□□ 0.47
RTN1-208ENST00000557422 SSH2Q76I76 1423 aa17.98■□□□□ 0.47
RTN1-208ENST00000557422 PHRF1Q9P1Y6 1649 aaKnown RBP17.98■□□□□ 0.47
RTN1-208ENST00000557422 NUP188Q5SRE5 1749 aa17.98■□□□□ 0.47
RTN1-208ENST00000557422 ATP7BP35670 1465 aa17.97■□□□□ 0.47
RTN1-208ENST00000557422 LARP1Q6PKG0 1096 aaKnown RBP17.97■□□□□ 0.47
RTN1-208ENST00000557422 ITSN1Q15811 1721 aa17.96■□□□□ 0.47
RTN1-208ENST00000557422 DCAF11Q8TEB1 546 aa17.96■□□□□ 0.47
RTN1-208ENST00000557422 SPON1Q9HCB6 807 aa17.96■□□□□ 0.47
RTN1-208ENST00000557422 TCP11L2Q8N4U5 519 aa17.95■□□□□ 0.46
RTN1-208ENST00000557422 CAMTA1Q9Y6Y1 1673 aa17.95■□□□□ 0.46
RTN1-208ENST00000557422 KCNQ2O43526 872 aa17.94■□□□□ 0.46
RTN1-208ENST00000557422 CDK19Q9BWU1 502 aa17.94■□□□□ 0.46
RTN1-208ENST00000557422 PPP1R1BQ9UD71 204 aaPredicted RBP17.94■□□□□ 0.46
RTN1-208ENST00000557422 ACEP12821 1306 aa17.94■□□□□ 0.46
RTN1-208ENST00000557422 POLR3AO14802 1390 aaPredicted RBP17.93■□□□□ 0.46
RTN1-208ENST00000557422 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
RTN1-208ENST00000557422 CPDO75976 1380 aa17.91■□□□□ 0.46
RTN1-208ENST00000557422 ABTB2Q8N961 1025 aa17.91■□□□□ 0.46
RTN1-208ENST00000557422 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
RTN1-208ENST00000557422 ARHGEF28Q8N1W1 1705 aaKnown RBP17.91■□□□□ 0.46
RTN1-208ENST00000557422 NINLQ9Y2I6 1382 aa17.91■□□□□ 0.46
RTN1-208ENST00000557422 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
RTN1-208ENST00000557422 PLEKHG3A1L390 1219 aa17.9■□□□□ 0.46
RTN1-208ENST00000557422 DCAF8L1A6NGE4 600 aa17.9■□□□□ 0.46
RTN1-208ENST00000557422 CCDC61Q9Y6R9 512 aa17.9■□□□□ 0.46
RTN1-208ENST00000557422 NRKQ7Z2Y5 1582 aa17.9■□□□□ 0.46
RTN1-208ENST00000557422 USP19O94966 1318 aa17.9■□□□□ 0.46
RTN1-208ENST00000557422 C11orf95C9JLR9 678 aaPredicted RBP17.88■□□□□ 0.45
RTN1-208ENST00000557422 GCP02774 474 aa17.88■□□□□ 0.45
RTN1-208ENST00000557422 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
RTN1-208ENST00000557422 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
RTN1-208ENST00000557422 PLSCR1O15162 318 aa17.86■□□□□ 0.45
RTN1-208ENST00000557422 NLRP13Q86W25 1043 aa17.86■□□□□ 0.45
RTN1-208ENST00000557422 RAB3GAP2Q9H2M9 1393 aa17.86■□□□□ 0.45
RTN1-208ENST00000557422 COL5A2P05997 1499 aaPredicted RBP17.85■□□□□ 0.45
RTN1-208ENST00000557422 PEAK1Q9H792 1746 aa17.84■□□□□ 0.45
RTN1-208ENST00000557422 OVOS2A0A0G2JMS6 1433 aa17.84■□□□□ 0.45
RTN1-208ENST00000557422 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
RTN1-208ENST00000557422 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
RTN1-208ENST00000557422 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
RTN1-208ENST00000557422 CRB1P82279 1406 aa17.83■□□□□ 0.45
RTN1-208ENST00000557422 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
RTN1-208ENST00000557422 PDGFDQ9GZP0 370 aaPredicted RBP17.82■□□□□ 0.44
RTN1-208ENST00000557422 SBF2Q86WG5 1849 aa17.82■□□□□ 0.44
RTN1-208ENST00000557422 RGPD3A6NKT7 1758 aaPredicted RBP17.81■□□□□ 0.44
RTN1-208ENST00000557422 RGPD4Q7Z3J3 1758 aa17.81■□□□□ 0.44
RTN1-208ENST00000557422 BCL11BQ9C0K0 894 aaPredicted RBP17.81■□□□□ 0.44
RTN1-208ENST00000557422 DDB1Q16531 1140 aa17.8■□□□□ 0.44
RTN1-208ENST00000557422 PROM2Q8N271 834 aa17.8■□□□□ 0.44
RTN1-208ENST00000557422 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
RTN1-208ENST00000557422 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
RTN1-208ENST00000557422 ZBTB7CA1YPR0 619 aa17.79■□□□□ 0.44
RTN1-208ENST00000557422 PPIP5K1Q6PFW1 1433 aa17.79■□□□□ 0.44
RTN1-208ENST00000557422 ZBTB7AO95365 584 aa17.78■□□□□ 0.44
RTN1-208ENST00000557422 PTGER2P43116 358 aa17.78■□□□□ 0.44
RTN1-208ENST00000557422 SRPK2P78362 688 aaKnown RBP17.78■□□□□ 0.44
RTN1-208ENST00000557422 LRRC37A3O60309 1634 aa17.78■□□□□ 0.44
RTN1-208ENST00000557422 BRD4O60885 1362 aaPredicted RBP17.78■□□□□ 0.44
RTN1-208ENST00000557422 NLRP6P59044 892 aa17.77■□□□□ 0.44
RTN1-208ENST00000557422 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
RTN1-208ENST00000557422 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
RTN1-208ENST00000557422 NBPF1Q3BBV0 1214 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms