RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CSPP1Q1MSJ5 1256 aa8.14□□□□□ -1.11
CHD8-212ENST00000557329 LYPD8Q6UX82 237 aa8.14□□□□□ -1.11
CHD8-212ENST00000557329 PNMA1Q8ND90 353 aa8.14□□□□□ -1.11
CHD8-212ENST00000557329 NUDT12Q9BQG2 462 aa8.14□□□□□ -1.11
CHD8-212ENST00000557329 C11orf95C9JLR9 678 aaPredicted RBP8.13□□□□□ -1.11
CHD8-212ENST00000557329 APBB1O00213 710 aa8.13□□□□□ -1.11
CHD8-212ENST00000557329 ARMC2Q8NEN0 867 aa8.13□□□□□ -1.11
CHD8-212ENST00000557329 SYMPKQ92797 1274 aaKnown RBP8.13□□□□□ -1.11
CHD8-212ENST00000557329 EVA1BQ9NVM1 165 aa8.12□□□□□ -1.11
CHD8-212ENST00000557329 WIPF1O43516 503 aa8.11□□□□□ -1.11
CHD8-212ENST00000557329 NFX1Q12986 1120 aaKnown RBP8.11□□□□□ -1.11
CHD8-212ENST00000557329 QPCTQ16769 361 aa8.11□□□□□ -1.11
CHD8-212ENST00000557329 TMEM132AQ24JP5 1023 aa8.11□□□□□ -1.11
CHD8-212ENST00000557329 CABLES1Q8TDN4 633 aa8.11□□□□□ -1.11
CHD8-212ENST00000557329 PRDM9Q9NQV7 894 aa8.11□□□□□ -1.11
CHD8-212ENST00000557329 STK17AQ9UEE5 414 aa8.11□□□□□ -1.11
CHD8-212ENST00000557329 TTC24A2A3L6 582 aaPredicted RBP8.1□□□□□ -1.11
CHD8-212ENST00000557329 CFAP99D6REC4 459 aa8.1□□□□□ -1.11
CHD8-212ENST00000557329 SOCS7O14512 581 aa8.1□□□□□ -1.11
CHD8-212ENST00000557329 KCNH2Q12809 1159 aa8.1□□□□□ -1.11
CHD8-212ENST00000557329 CCDC24Q8N4L8 307 aa8.1□□□□□ -1.11
CHD8-212ENST00000557329 BANK1Q8NDB2 785 aa8.1□□□□□ -1.11
CHD8-212ENST00000557329 WNT7AO00755 349 aa8.09□□□□□ -1.11
CHD8-212ENST00000557329 WNT7BP56706 349 aa8.09□□□□□ -1.11
CHD8-212ENST00000557329 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
CHD8-212ENST00000557329 TSC1Q92574 1164 aa8.09□□□□□ -1.11
CHD8-212ENST00000557329 RTL5Q5HYW3 569 aaPredicted RBP8.08□□□□□ -1.12
CHD8-212ENST00000557329 SNIP1Q8TAD8 396 aaKnown RBP8.08□□□□□ -1.12
CHD8-212ENST00000557329 GPKOWQ92917 476 aaPredicted RBP eCLIP8.08□□□□□ -1.12
CHD8-212ENST00000557329 SMPD1P17405 629 aa8.07□□□□□ -1.12
CHD8-212ENST00000557329 RFC5P40937 340 aa8.07□□□□□ -1.12
CHD8-212ENST00000557329 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
CHD8-212ENST00000557329 CTHP32929 405 aa8.06□□□□□ -1.12
CHD8-212ENST00000557329 TRIM32Q13049 653 aa8.06□□□□□ -1.12
CHD8-212ENST00000557329 PRM3Q9NNZ6 103 aa8.06□□□□□ -1.12
CHD8-212ENST00000557329 ATP13A2Q9NQ11 1180 aa8.06□□□□□ -1.12
CHD8-212ENST00000557329 ZC3H4Q9UPT8 1303 aaKnown RBP8.05□□□□□ -1.12
CHD8-212ENST00000557329 NBPF14Q5TI25 921 aa8.05□□□□□ -1.12
CHD8-212ENST00000557329 SENP2Q9HC62 589 aa8.05□□□□□ -1.12
CHD8-212ENST00000557329 AP1G2O75843 785 aa8.04□□□□□ -1.12
CHD8-212ENST00000557329 F12P00748 615 aaPredicted RBP8.04□□□□□ -1.12
CHD8-212ENST00000557329 TRIM47Q96LD4 638 aa8.04□□□□□ -1.12
CHD8-212ENST00000557329 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
CHD8-212ENST00000557329 TERTO14746 1132 aaKnown RBP8.03□□□□□ -1.12
CHD8-212ENST00000557329 SNRPBP14678 240 aaKnown RBP8.02□□□□□ -1.13
CHD8-212ENST00000557329 CTDSPL2Q05D32 466 aa8.02□□□□□ -1.13
CHD8-212ENST00000557329 MRGPRX2Q96LB1 330 aa8.02□□□□□ -1.13
CHD8-212ENST00000557329 J3QL48 77 aa8.01□□□□□ -1.13
CHD8-212ENST00000557329 KIFC2Q96AC6 838 aa8.01□□□□□ -1.13
CHD8-212ENST00000557329 USP17L8P0C7I0 530 aa8□□□□□ -1.13
CHD8-212ENST00000557329 ZNF592Q92610 1267 aa8□□□□□ -1.13
CHD8-212ENST00000557329 GPSM3Q9Y4H4 160 aa8□□□□□ -1.13
CHD8-212ENST00000557329 PER1O15534 1290 aaPredicted RBP7.99□□□□□ -1.13
CHD8-212ENST00000557329 VARSP26640 1264 aaKnown RBP7.99□□□□□ -1.13
CHD8-212ENST00000557329 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
CHD8-212ENST00000557329 BPHLQ86WA6 291 aaPredicted RBP7.99□□□□□ -1.13
CHD8-212ENST00000557329 PDXDC2PQ6P474 469 aa7.98□□□□□ -1.13
CHD8-212ENST00000557329 MPNDQ8N594 471 aa7.98□□□□□ -1.13
CHD8-212ENST00000557329 ZNF511Q8NB15 262 aa7.98□□□□□ -1.13
CHD8-212ENST00000557329 HPS1Q92902 700 aa7.98□□□□□ -1.13
CHD8-212ENST00000557329 TRIM52Q96A61 297 aa7.98□□□□□ -1.13
CHD8-212ENST00000557329 PTCRAQ6ISU1 281 aaPredicted RBP7.97□□□□□ -1.13
CHD8-212ENST00000557329 MAP10Q9P2G4 905 aa7.97□□□□□ -1.13
CHD8-212ENST00000557329 FKBPLQ9UIM3 349 aa7.97□□□□□ -1.13
CHD8-212ENST00000557329 PTK2Q05397 1052 aa7.96□□□□□ -1.14
CHD8-212ENST00000557329 FLIIQ13045 1269 aa7.96□□□□□ -1.14
CHD8-212ENST00000557329 RC3H1Q5TC82 1133 aaKnown RBP7.96□□□□□ -1.14
CHD8-212ENST00000557329 EHBP1Q8NDI1 1231 aa7.96□□□□□ -1.14
CHD8-212ENST00000557329 FAM174AQ8TBP5 190 aa7.96□□□□□ -1.14
CHD8-212ENST00000557329 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
CHD8-212ENST00000557329 SH3BP2P78314 561 aa7.95□□□□□ -1.14
CHD8-212ENST00000557329 LRRN4Q8WUT4 740 aa7.95□□□□□ -1.14
CHD8-212ENST00000557329 BAP1Q92560 729 aa7.95□□□□□ -1.14
CHD8-212ENST00000557329 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
CHD8-212ENST00000557329 SKOR1P84550 965 aa7.94□□□□□ -1.14
CHD8-212ENST00000557329 AGERQ15109 404 aa7.94□□□□□ -1.14
CHD8-212ENST00000557329 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
CHD8-212ENST00000557329 NDUFB9Q9Y6M9 179 aa7.94□□□□□ -1.14
CHD8-212ENST00000557329 NR6A1Q15406 480 aa7.93□□□□□ -1.14
CHD8-212ENST00000557329 FBXO31Q5XUX0 539 aaPredicted RBP7.92□□□□□ -1.14
CHD8-212ENST00000557329 SLC16A10Q8TF71 515 aa7.92□□□□□ -1.14
CHD8-212ENST00000557329 FAM181BA6NEQ2 426 aa7.91□□□□□ -1.14
CHD8-212ENST00000557329 CCDC125Q86Z20 511 aa7.91□□□□□ -1.14
CHD8-212ENST00000557329 WWC1Q8IX03 1113 aa7.91□□□□□ -1.14
CHD8-212ENST00000557329 NPAS3Q8IXF0 933 aa7.91□□□□□ -1.14
CHD8-212ENST00000557329 LINC01559Q495D7 138 aa7.9□□□□□ -1.14
CHD8-212ENST00000557329 SH3BP5LQ7L8J4 393 aa7.9□□□□□ -1.14
CHD8-212ENST00000557329 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
CHD8-212ENST00000557329 ZBTB33Q86T24 672 aa7.9□□□□□ -1.14
CHD8-212ENST00000557329 TRMT44Q8IYL2 757 aaKnown RBP7.9□□□□□ -1.14
CHD8-212ENST00000557329 ARHGAP9Q9BRR9 750 aa7.9□□□□□ -1.14
CHD8-212ENST00000557329 NXF1Q9UBU9 619 aaKnown RBP7.9□□□□□ -1.14
CHD8-212ENST00000557329 ALDH1A1P00352 501 aa7.89□□□□□ -1.15
CHD8-212ENST00000557329 MAP4K5Q9Y4K4 846 aa7.89□□□□□ -1.15
CHD8-212ENST00000557329 SIAH2O43255 324 aa7.88□□□□□ -1.15
CHD8-212ENST00000557329 GJD4Q96KN9 370 aaPredicted RBP7.88□□□□□ -1.15
CHD8-212ENST00000557329 CDK15Q96Q40 435 aa7.88□□□□□ -1.15
CHD8-212ENST00000557329 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
CHD8-212ENST00000557329 ZBBXA8MT70 800 aa7.87□□□□□ -1.15
CHD8-212ENST00000557329 NR5A1Q13285 461 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms