RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ALS2Q96Q42 1657 aa18.79■□□□□ 0.6
PSEN1-221ENST00000557293 ACIN1Q9UKV3 1341 aaKnown RBP18.78■□□□□ 0.6
PSEN1-221ENST00000557293 TNS1Q9HBL0 1735 aaKnown RBP18.78■□□□□ 0.6
PSEN1-221ENST00000557293 TRIM37O94972 964 aa18.77■□□□□ 0.6
PSEN1-221ENST00000557293 POGKQ9P215 609 aa18.77■□□□□ 0.6
PSEN1-221ENST00000557293 DLC1Q96QB1 1528 aa18.77■□□□□ 0.6
PSEN1-221ENST00000557293 SPATA31A1Q5TZJ5 1347 aa18.76■□□□□ 0.59
PSEN1-221ENST00000557293 HIRIP3Q9BW71 556 aaPredicted RBP18.76■□□□□ 0.59
PSEN1-221ENST00000557293 GPRASP1Q5JY77 1395 aa18.75■□□□□ 0.59
PSEN1-221ENST00000557293 CRYBG1Q9Y4K1 1723 aa18.74■□□□□ 0.59
PSEN1-221ENST00000557293 ADGRB2O60241 1585 aa18.74■□□□□ 0.59
PSEN1-221ENST00000557293 FAM196AQ6ZSG2 479 aa18.74■□□□□ 0.59
PSEN1-221ENST00000557293 APBA3O96018 575 aa18.73■□□□□ 0.59
PSEN1-221ENST00000557293 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
PSEN1-221ENST00000557293 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
PSEN1-221ENST00000557293 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
PSEN1-221ENST00000557293 CHRNA2Q15822 529 aa18.72■□□□□ 0.59
PSEN1-221ENST00000557293 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
PSEN1-221ENST00000557293 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
PSEN1-221ENST00000557293 KIAA0232Q92628 1395 aa18.7■□□□□ 0.58
PSEN1-221ENST00000557293 YY1P25490 414 aa18.7■□□□□ 0.58
PSEN1-221ENST00000557293 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
PSEN1-221ENST00000557293 NGDNQ8NEJ9 315 aaKnown RBP18.69■□□□□ 0.58
PSEN1-221ENST00000557293 PARD3Q8TEW0 1356 aa18.68■□□□□ 0.58
PSEN1-221ENST00000557293 STRN4Q9NRL3 753 aa18.68■□□□□ 0.58
PSEN1-221ENST00000557293 TULP4Q9NRJ4 1543 aa18.68■□□□□ 0.58
PSEN1-221ENST00000557293 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
PSEN1-221ENST00000557293 BARGINQ6ZT62 677 aa18.67■□□□□ 0.58
PSEN1-221ENST00000557293 RREB1Q92766 1687 aa18.65■□□□□ 0.58
PSEN1-221ENST00000557293 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
PSEN1-221ENST00000557293 NUTM2GQ5VZR2 741 aa18.64■□□□□ 0.57
PSEN1-221ENST00000557293 USP35Q9P2H5 1018 aa18.64■□□□□ 0.57
PSEN1-221ENST00000557293 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
PSEN1-221ENST00000557293 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
PSEN1-221ENST00000557293 NUP188Q5SRE5 1749 aa18.63■□□□□ 0.57
PSEN1-221ENST00000557293 KCNQ2O43526 872 aa18.62■□□□□ 0.57
PSEN1-221ENST00000557293 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
PSEN1-221ENST00000557293 NBPF8Q3BBV2 869 aa18.62■□□□□ 0.57
PSEN1-221ENST00000557293 NBPF14Q5TI25 921 aa18.62■□□□□ 0.57
PSEN1-221ENST00000557293 SSH2Q76I76 1423 aa18.62■□□□□ 0.57
PSEN1-221ENST00000557293 CAMTA1Q9Y6Y1 1673 aa18.62■□□□□ 0.57
PSEN1-221ENST00000557293 SPON1Q9HCB6 807 aa18.61■□□□□ 0.57
PSEN1-221ENST00000557293 ATP7BP35670 1465 aa18.6■□□□□ 0.57
PSEN1-221ENST00000557293 EVA1CP58658 441 aa18.6■□□□□ 0.57
PSEN1-221ENST00000557293 PHRF1Q9P1Y6 1649 aaKnown RBP18.6■□□□□ 0.57
PSEN1-221ENST00000557293 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
PSEN1-221ENST00000557293 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
PSEN1-221ENST00000557293 POLR3AO14802 1390 aaPredicted RBP18.57■□□□□ 0.56
PSEN1-221ENST00000557293 CDK19Q9BWU1 502 aa18.57■□□□□ 0.56
PSEN1-221ENST00000557293 ACEP12821 1306 aa18.56■□□□□ 0.56
PSEN1-221ENST00000557293 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
PSEN1-221ENST00000557293 DCAF11Q8TEB1 546 aa18.56■□□□□ 0.56
PSEN1-221ENST00000557293 CPDO75976 1380 aa18.55■□□□□ 0.56
PSEN1-221ENST00000557293 LMO7Q8WWI1 1683 aa18.55■□□□□ 0.56
PSEN1-221ENST00000557293 THRAP3Q9Y2W1 955 aaKnown RBP18.55■□□□□ 0.56
PSEN1-221ENST00000557293 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
PSEN1-221ENST00000557293 USP19O94966 1318 aa18.54■□□□□ 0.56
PSEN1-221ENST00000557293 PTF1AQ7RTS3 328 aa18.54■□□□□ 0.56
PSEN1-221ENST00000557293 PPP1R1BQ9UD71 204 aaPredicted RBP18.54■□□□□ 0.56
PSEN1-221ENST00000557293 PLSCR1O15162 318 aa18.53■□□□□ 0.56
PSEN1-221ENST00000557293 PROM2Q8N271 834 aa18.53■□□□□ 0.56
PSEN1-221ENST00000557293 PDGFDQ9GZP0 370 aaPredicted RBP18.53■□□□□ 0.56
PSEN1-221ENST00000557293 ANO8Q9HCE9 1232 aaPredicted RBP18.53■□□□□ 0.56
PSEN1-221ENST00000557293 CCDC61Q9Y6R9 512 aa18.53■□□□□ 0.56
PSEN1-221ENST00000557293 NRKQ7Z2Y5 1582 aa18.52■□□□□ 0.56
PSEN1-221ENST00000557293 GCP02774 474 aa18.52■□□□□ 0.56
PSEN1-221ENST00000557293 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
PSEN1-221ENST00000557293 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
PSEN1-221ENST00000557293 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
PSEN1-221ENST00000557293 PEAK1Q9H792 1746 aa18.51■□□□□ 0.55
PSEN1-221ENST00000557293 ARHGEF28Q8N1W1 1705 aaKnown RBP18.5■□□□□ 0.55
PSEN1-221ENST00000557293 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
PSEN1-221ENST00000557293 C11orf95C9JLR9 678 aaPredicted RBP18.49■□□□□ 0.55
PSEN1-221ENST00000557293 COL5A2P05997 1499 aaPredicted RBP18.48■□□□□ 0.55
PSEN1-221ENST00000557293 PTGER2P43116 358 aa18.48■□□□□ 0.55
PSEN1-221ENST00000557293 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
PSEN1-221ENST00000557293 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
PSEN1-221ENST00000557293 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
PSEN1-221ENST00000557293 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
PSEN1-221ENST00000557293 BCL11BQ9C0K0 894 aaPredicted RBP18.46■□□□□ 0.55
PSEN1-221ENST00000557293 CRB1P82279 1406 aa18.46■□□□□ 0.55
PSEN1-221ENST00000557293 SBF2Q86WG5 1849 aa18.46■□□□□ 0.55
PSEN1-221ENST00000557293 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
PSEN1-221ENST00000557293 ZNF784Q8NCA9 323 aaPredicted RBP18.45■□□□□ 0.54
PSEN1-221ENST00000557293 OVOS2A0A0G2JMS6 1433 aa18.45■□□□□ 0.54
PSEN1-221ENST00000557293 OVOS2A0A0J9YW53 1432 aa18.45■□□□□ 0.54
PSEN1-221ENST00000557293 OVOS2Q6IE36 1432 aa18.45■□□□□ 0.54
PSEN1-221ENST00000557293 ZBTB7AO95365 584 aa18.44■□□□□ 0.54
PSEN1-221ENST00000557293 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-221ENST00000557293 AATKQ6ZMQ8 1374 aa18.42■□□□□ 0.54
PSEN1-221ENST00000557293 RGPD3A6NKT7 1758 aaPredicted RBP18.42■□□□□ 0.54
PSEN1-221ENST00000557293 RGPD4Q7Z3J3 1758 aa18.42■□□□□ 0.54
PSEN1-221ENST00000557293 DDB1Q16531 1140 aa18.42■□□□□ 0.54
PSEN1-221ENST00000557293 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
PSEN1-221ENST00000557293 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
PSEN1-221ENST00000557293 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
PSEN1-221ENST00000557293 SGIP1Q9BQI5 828 aa18.4■□□□□ 0.54
PSEN1-221ENST00000557293 SYT17Q9BSW7 474 aa18.4■□□□□ 0.54
PSEN1-221ENST00000557293 LRRC37A3O60309 1634 aa18.4■□□□□ 0.54
PSEN1-221ENST00000557293 BCL9O00512 1426 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms