RNA–Protein interactions for RNA: ENST00000556143.5

ZFYVE1-208, Transcript of zinc finger FYVE-type containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZFYVE1, Length 4,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-208ENST00000556143 NCOA1Q15788 1441 aa12.75□□□□□ -0.37
ZFYVE1-208ENST00000556143 EXOSC9Q06265 439 aaKnown RBP12.75□□□□□ -0.37
ZFYVE1-208ENST00000556143 RALYLQ86SE5 291 aaKnown RBP12.74□□□□□ -0.37
ZFYVE1-208ENST00000556143 PHF23Q9BUL5 403 aaPredicted RBP12.74□□□□□ -0.37
ZFYVE1-208ENST00000556143 DHX29Q7Z478 1369 aaKnown RBP12.74□□□□□ -0.37
ZFYVE1-208ENST00000556143 LNPKQ9C0E8 428 aa12.74□□□□□ -0.37
ZFYVE1-208ENST00000556143 SKOR2Q2VWA4 1001 aaPredicted RBP12.74□□□□□ -0.37
ZFYVE1-208ENST00000556143 GZF1Q9H116 711 aaPredicted RBP12.74□□□□□ -0.37
ZFYVE1-208ENST00000556143 TBC1D2BQ9UPU7 963 aa12.74□□□□□ -0.37
ZFYVE1-208ENST00000556143 CCT4P50991 539 aaKnown RBP12.73□□□□□ -0.37
ZFYVE1-208ENST00000556143 NINLQ9Y2I6 1382 aa12.73□□□□□ -0.37
ZFYVE1-208ENST00000556143 GOLGA6L3A6NEY3 463 aa12.73□□□□□ -0.37
ZFYVE1-208ENST00000556143 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
ZFYVE1-208ENST00000556143 IDI1Q13907 227 aa12.73□□□□□ -0.37
ZFYVE1-208ENST00000556143 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
ZFYVE1-208ENST00000556143 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 IL27Q8NEV9 243 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 HIP1O00291 1037 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 PANK1Q8TE04 598 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 FANCIQ9NVI1 1328 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 PTPN23Q9H3S7 1636 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 NUTM2BA6NNL0 878 aaPredicted RBP12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 NUTM2EB1AL46 878 aaPredicted RBP12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 GNAI2P04899 355 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 NUTM2AQ8IVF1 878 aaPredicted RBP12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 CCDC47Q96A33 483 aaKnown RBP12.72□□□□□ -0.37
ZFYVE1-208ENST00000556143 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 CNTROBQ8N137 903 aa12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 DDX54Q8TDD1 881 aaKnown RBP12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 TEX14Q8IWB6 1497 aa12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 DHX16O60231 1041 aaKnown RBP12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 CDC45O75419 566 aa12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 WASHC4Q2M389 1173 aa12.71□□□□□ -0.37
ZFYVE1-208ENST00000556143 TCEAL9Q9UHQ7 104 aa12.71□□□□□ -0.38
ZFYVE1-208ENST00000556143 MCTP1Q6DN14 999 aa12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 SRCIN1Q9C0H9 1055 aa12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 NFXL1Q6ZNB6 911 aa12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 AMOTL2Q9Y2J4 779 aa12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 GNL3LQ9NVN8 582 aaKnown RBP12.7□□□□□ -0.38
ZFYVE1-208ENST00000556143 PSMA5P28066 241 aa12.69□□□□□ -0.38
ZFYVE1-208ENST00000556143 DDX49Q9Y6V7 483 aaKnown RBP12.69□□□□□ -0.38
ZFYVE1-208ENST00000556143 NSD3Q9BZ95 1437 aa12.69□□□□□ -0.38
ZFYVE1-208ENST00000556143 RAD21O60216 631 aa12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 TPD52L1Q16890 204 aaPredicted RBP12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 LRPPRCP42704 1394 aaKnown RBP12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 CEP89Q96ST8 783 aa12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 HOOK1Q9UJC3 728 aaKnown RBP12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 SART3Q15020 963 aaKnown RBP12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 AMOTQ4VCS5 1084 aa12.68□□□□□ -0.38
ZFYVE1-208ENST00000556143 TPM3P06753 285 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 TPM2P07951 284 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 NUCB2P80303 420 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 BECN2A8MW95 431 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 GOLGA6L19H0YKK7 550 aa12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 FBXO31Q5XUX0 539 aaPredicted RBP12.67□□□□□ -0.38
ZFYVE1-208ENST00000556143 PLCH2O75038 1416 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 RRS1Q15050 365 aaKnown RBP12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 CHMP5Q9NZZ3 219 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 CCDC158Q5M9N0 1113 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 CNNM1Q9NRU3 951 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 TPM1P09493 284 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 XBP1P17861 261 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 ZMYND15Q9H091 742 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 SLC3A2P08195 630 aaKnown RBP12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 FOXD4L5Q5VV16 416 aaPredicted RBP12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 ATF7IPQ6VMQ6 1270 aa12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 FOXD4L4Q8WXT5 416 aaPredicted RBP12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
ZFYVE1-208ENST00000556143 PIP4K2BP78356 416 aa12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 ABCC11Q96J66 1382 aa12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 FAM135AQ9P2D6 1515 aa12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 STARD3NLO95772 234 aa12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 CREBRFQ8IUR6 639 aa12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 TSR2Q969E8 191 aaKnown RBP12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 C22orf23Q9BZE7 217 aa12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 TNRQ92752 1358 aa12.65□□□□□ -0.38
ZFYVE1-208ENST00000556143 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
ZFYVE1-208ENST00000556143 BTBD11A6QL63 1104 aa12.64□□□□□ -0.39
ZFYVE1-208ENST00000556143 ANKRD20A12PQ8NF67 263 aa12.64□□□□□ -0.39
ZFYVE1-208ENST00000556143 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms