RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 RSPH6AQ9H0K4 717 aa7.08□□□□□ -1.28
NUMB-220ENST00000556112 EEA1Q15075 1411 aa7.08□□□□□ -1.28
NUMB-220ENST00000556112 PRG4Q92954 1404 aaPredicted RBP7.08□□□□□ -1.28
NUMB-220ENST00000556112 RGS20O76081 388 aa7.07□□□□□ -1.28
NUMB-220ENST00000556112 TMEM132AQ24JP5 1023 aa7.07□□□□□ -1.28
NUMB-220ENST00000556112 PRDM9Q9NQV7 894 aa7.07□□□□□ -1.28
NUMB-220ENST00000556112 PRXQ9BXM0 1461 aa7.06□□□□□ -1.28
NUMB-220ENST00000556112 SPTLC1O15269 473 aa7.06□□□□□ -1.28
NUMB-220ENST00000556112 GJA5P36382 358 aa7.06□□□□□ -1.28
NUMB-220ENST00000556112 CSPP1Q1MSJ5 1256 aa7.06□□□□□ -1.28
NUMB-220ENST00000556112 MSS51Q4VC12 460 aa7.06□□□□□ -1.28
NUMB-220ENST00000556112 POLR3EQ9NVU0 708 aa7.06□□□□□ -1.28
NUMB-220ENST00000556112 PCDHB15Q9Y5E8 787 aa7.06□□□□□ -1.28
NUMB-220ENST00000556112 ARAP1Q96P48 1450 aa7.05□□□□□ -1.28
NUMB-220ENST00000556112 MTMR2Q13614 643 aa7.05□□□□□ -1.28
NUMB-220ENST00000556112 RETREG3Q86VR2 466 aa7.05□□□□□ -1.28
NUMB-220ENST00000556112 ANKLE1Q8NAG6 615 aa7.05□□□□□ -1.28
NUMB-220ENST00000556112 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
NUMB-220ENST00000556112 PLEKHG3A1L390 1219 aa7.04□□□□□ -1.28
NUMB-220ENST00000556112 IL27Q8NEV9 243 aa7.04□□□□□ -1.28
NUMB-220ENST00000556112 PRKD2Q9BZL6 878 aa7.04□□□□□ -1.28
NUMB-220ENST00000556112 ATP1B4Q9UN42 357 aaPredicted RBP7.04□□□□□ -1.28
NUMB-220ENST00000556112 CARMIL2Q6F5E8 1435 aa7.03□□□□□ -1.28
NUMB-220ENST00000556112 SHROOM2Q13796 1616 aa7.03□□□□□ -1.28
NUMB-220ENST00000556112 CLK2P49760 499 aaKnown RBP7.03□□□□□ -1.28
NUMB-220ENST00000556112 ZBTB3Q9H5J0 574 aa7.03□□□□□ -1.28
NUMB-220ENST00000556112 FCF1Q9Y324 198 aaKnown RBP7.03□□□□□ -1.28
NUMB-220ENST00000556112 ERCC6L2Q5T890 1561 aa7.03□□□□□ -1.28
NUMB-220ENST00000556112 TTBK1Q5TCY1 1321 aaPredicted RBP7.02□□□□□ -1.28
NUMB-220ENST00000556112 SPDYE5A6NIY4 337 aa7.02□□□□□ -1.29
NUMB-220ENST00000556112 NUTM2BA6NNL0 878 aaPredicted RBP7.02□□□□□ -1.29
NUMB-220ENST00000556112 NUTM2EB1AL46 878 aaPredicted RBP7.02□□□□□ -1.29
NUMB-220ENST00000556112 HRCP23327 699 aa7.02□□□□□ -1.29
NUMB-220ENST00000556112 MMP16P51512 607 aa7.02□□□□□ -1.29
NUMB-220ENST00000556112 SKIV2LQ15477 1246 aaKnown RBP7.02□□□□□ -1.29
NUMB-220ENST00000556112 NUTM2DQ5VT03 806 aaPredicted RBP7.02□□□□□ -1.29
NUMB-220ENST00000556112 PRPF38BQ5VTL8 546 aaKnown RBP7.02□□□□□ -1.29
NUMB-220ENST00000556112 NUTM2AQ8IVF1 878 aaPredicted RBP7.02□□□□□ -1.29
NUMB-220ENST00000556112 PRR7Q8TB68 274 aa7.02□□□□□ -1.29
NUMB-220ENST00000556112 CABLES1Q8TDN4 633 aa7.02□□□□□ -1.29
NUMB-220ENST00000556112 PTPRGP23470 1445 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 TNIKQ9UKE5 1360 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 DXOO77932 396 aaKnown RBP7.01□□□□□ -1.29
NUMB-220ENST00000556112 UBTFP17480 764 aaKnown RBP7.01□□□□□ -1.29
NUMB-220ENST00000556112 JUNDP17535 347 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 SLC19A1P41440 591 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 QPCTQ16769 361 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 TUSC1Q2TAM9 212 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 SH3D19Q5HYK7 790 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 PLA2G2CQ5R387 149 aa7.01□□□□□ -1.29
NUMB-220ENST00000556112 V9GY48 417 aaPredicted RBP7.01□□□□□ -1.29
NUMB-220ENST00000556112 IQGAP2Q13576 1575 aa7□□□□□ -1.29
NUMB-220ENST00000556112 CCDC24Q8N4L8 307 aa7□□□□□ -1.29
NUMB-220ENST00000556112 LILRB3O75022 631 aa6.99□□□□□ -1.29
NUMB-220ENST00000556112 LIAT1Q6ZQX7 453 aa6.99□□□□□ -1.29
NUMB-220ENST00000556112 PROCA1Q8NCQ7 364 aaPredicted RBP6.99□□□□□ -1.29
NUMB-220ENST00000556112 TSC1Q92574 1164 aa6.99□□□□□ -1.29
NUMB-220ENST00000556112 EMID1Q96A84 441 aaPredicted RBP6.99□□□□□ -1.29
NUMB-220ENST00000556112 UGGT2Q9NYU1 1516 aa6.98□□□□□ -1.29
NUMB-220ENST00000556112 CFAP99D6REC4 459 aa6.98□□□□□ -1.29
NUMB-220ENST00000556112 ZBTB24O43167 697 aaPredicted RBP6.98□□□□□ -1.29
NUMB-220ENST00000556112 RANGAP1P46060 587 aaPredicted RBP6.98□□□□□ -1.29
NUMB-220ENST00000556112 GOLGA3Q08378 1498 aa6.98□□□□□ -1.29
NUMB-220ENST00000556112 DISP1Q96F81 1524 aa6.97□□□□□ -1.29
NUMB-220ENST00000556112 RTL5Q5HYW3 569 aaPredicted RBP6.97□□□□□ -1.29
NUMB-220ENST00000556112 DESI1Q6ICB0 168 aa6.97□□□□□ -1.29
NUMB-220ENST00000556112 NUDT12Q9BQG2 462 aa6.97□□□□□ -1.29
NUMB-220ENST00000556112 SPRYD7Q5W111 196 aa6.96□□□□□ -1.3
NUMB-220ENST00000556112 PCMTD1Q96MG8 357 aaPredicted RBP6.96□□□□□ -1.3
NUMB-220ENST00000556112 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.96□□□□□ -1.3
NUMB-220ENST00000556112 GOPCQ9HD26 462 aa6.96□□□□□ -1.3
NUMB-220ENST00000556112 CD2BP2O95400 341 aaKnown RBP6.95□□□□□ -1.3
NUMB-220ENST00000556112 CCNYL3P0C7X3 344 aa6.95□□□□□ -1.3
NUMB-220ENST00000556112 RPIAP49247 311 aa6.95□□□□□ -1.3
NUMB-220ENST00000556112 PTPRNQ16849 979 aa6.95□□□□□ -1.3
NUMB-220ENST00000556112 KIF21BO75037 1637 aa6.94□□□□□ -1.3
NUMB-220ENST00000556112 UACAQ9BZF9 1416 aa6.94□□□□□ -1.3
NUMB-220ENST00000556112 LYPD8Q6UX82 237 aa6.94□□□□□ -1.3
NUMB-220ENST00000556112 ZNF598Q86UK7 904 aaKnown RBP6.94□□□□□ -1.3
NUMB-220ENST00000556112 HELBQ8NG08 1087 aaPredicted RBP6.94□□□□□ -1.3
NUMB-220ENST00000556112 ZNF697Q5TEC3 545 aa6.93□□□□□ -1.3
NUMB-220ENST00000556112 FBXO31Q5XUX0 539 aaPredicted RBP6.93□□□□□ -1.3
NUMB-220ENST00000556112 PTCRAQ6ISU1 281 aaPredicted RBP6.93□□□□□ -1.3
NUMB-220ENST00000556112 IRX2Q9BZI1 471 aaPredicted RBP6.93□□□□□ -1.3
NUMB-220ENST00000556112 EVA1BQ9NVM1 165 aa6.93□□□□□ -1.3
NUMB-220ENST00000556112 UHRF1BP1LA0JNW5 1464 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 KIAA0556O60303 1618 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 PER1O15534 1290 aaPredicted RBP6.92□□□□□ -1.3
NUMB-220ENST00000556112 CTHP32929 405 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 FAM69CQ0P6D2 419 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 KCNH2Q12809 1159 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 TRIM32Q13049 653 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 PPP2R2DQ66LE6 453 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 CTTNBP2Q8WZ74 1663 aa6.92□□□□□ -1.3
NUMB-220ENST00000556112 CTDSPL2Q05D32 466 aa6.91□□□□□ -1.3
NUMB-220ENST00000556112 ABCC2Q92887 1545 aa6.91□□□□□ -1.3
NUMB-220ENST00000556112 GFRA3O60609 400 aa6.9□□□□□ -1.3
NUMB-220ENST00000556112 FOXC1Q12948 553 aa6.9□□□□□ -1.3
NUMB-220ENST00000556112 UNC93B1Q9H1C4 597 aa6.9□□□□□ -1.3
NUMB-220ENST00000556112 PDZRN3Q9UPQ7 1066 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms