RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 TIMP2P16035 220 aa7.33□□□□□ -1.24
EFCAB11-210ENST00000556078 KRT76Q01546 638 aa7.33□□□□□ -1.24
EFCAB11-210ENST00000556078 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
EFCAB11-210ENST00000556078 TLL2Q9Y6L7 1015 aa7.33□□□□□ -1.24
EFCAB11-210ENST00000556078 MS4A1P11836 297 aa7.32□□□□□ -1.24
EFCAB11-210ENST00000556078 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
EFCAB11-210ENST00000556078 PTPRNQ16849 979 aa7.32□□□□□ -1.24
EFCAB11-210ENST00000556078 KLF16Q9BXK1 252 aaPredicted RBP7.32□□□□□ -1.24
EFCAB11-210ENST00000556078 UNC93B1Q9H1C4 597 aa7.32□□□□□ -1.24
EFCAB11-210ENST00000556078 EVA1BQ9NVM1 165 aa7.32□□□□□ -1.24
EFCAB11-210ENST00000556078 KRTAP9-6A0A140TA67 174 aa7.31□□□□□ -1.24
EFCAB11-210ENST00000556078 MARSP56192 900 aaKnown RBP7.31□□□□□ -1.24
EFCAB11-210ENST00000556078 WDR4P57081 412 aaKnown RBP7.31□□□□□ -1.24
EFCAB11-210ENST00000556078 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
EFCAB11-210ENST00000556078 ZNF385CQ66K41 422 aaPredicted RBP7.31□□□□□ -1.24
EFCAB11-210ENST00000556078 KANK3Q6NY19 840 aa7.3□□□□□ -1.24
EFCAB11-210ENST00000556078 GPR161Q8N6U8 529 aaKnown RBP7.3□□□□□ -1.24
EFCAB11-210ENST00000556078 ZNF511Q8NB15 262 aa7.3□□□□□ -1.24
EFCAB11-210ENST00000556078 BAP1Q92560 729 aa7.3□□□□□ -1.24
EFCAB11-210ENST00000556078 IRF6O14896 467 aa7.29□□□□□ -1.24
EFCAB11-210ENST00000556078 C6orf118Q5T5N4 469 aa7.29□□□□□ -1.24
EFCAB11-210ENST00000556078 KCNH2Q12809 1159 aa7.28□□□□□ -1.24
EFCAB11-210ENST00000556078 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
EFCAB11-210ENST00000556078 NUTM1Q86Y26 1132 aa7.28□□□□□ -1.24
EFCAB11-210ENST00000556078 MSTNO14793 375 aa7.27□□□□□ -1.25
EFCAB11-210ENST00000556078 FDX1P10109 184 aa7.27□□□□□ -1.25
EFCAB11-210ENST00000556078 CDK15Q96Q40 435 aa7.27□□□□□ -1.25
EFCAB11-210ENST00000556078 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
EFCAB11-210ENST00000556078 RTN4Q9NQC3 1192 aaKnown RBP7.27□□□□□ -1.25
EFCAB11-210ENST00000556078 FAM217BQ9NTX9 383 aaPredicted RBP7.27□□□□□ -1.25
EFCAB11-210ENST00000556078 PCDHGC3Q9UN70 934 aa7.27□□□□□ -1.25
EFCAB11-210ENST00000556078 C6orf229H3BNL8 230 aa7.26□□□□□ -1.25
EFCAB11-210ENST00000556078 FAM174AQ8TBP5 190 aa7.26□□□□□ -1.25
EFCAB11-210ENST00000556078 WHAMMQ8TF30 809 aa7.26□□□□□ -1.25
EFCAB11-210ENST00000556078 GPCPD1Q9NPB8 672 aa7.26□□□□□ -1.25
EFCAB11-210ENST00000556078 MINK1Q8N4C8 1332 aaPredicted RBP7.26□□□□□ -1.25
EFCAB11-210ENST00000556078 CLCN1P35523 988 aa7.25□□□□□ -1.25
EFCAB11-210ENST00000556078 DESI1Q6ICB0 168 aa7.25□□□□□ -1.25
EFCAB11-210ENST00000556078 KRTAP1-3Q8IUG1 177 aa7.25□□□□□ -1.25
EFCAB11-210ENST00000556078 SCARF2Q96GP6 870 aaPredicted RBP7.25□□□□□ -1.25
EFCAB11-210ENST00000556078 ARHGEF15O94989 841 aa7.23□□□□□ -1.25
EFCAB11-210ENST00000556078 ZIC2O95409 532 aaPredicted RBP7.23□□□□□ -1.25
EFCAB11-210ENST00000556078 NR5A1Q13285 461 aa7.23□□□□□ -1.25
EFCAB11-210ENST00000556078 UNC13AQ9UPW8 1703 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 SPDYE5A6NIY4 337 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 BMP2P12643 396 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 PLA2G4EQ3MJ16 856 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 Q8N3U1 123 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 ITPKCQ96DU7 683 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 SPOCK3Q9BQ16 436 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 ZFAND3Q9H8U3 227 aa7.22□□□□□ -1.25
EFCAB11-210ENST00000556078 UPP2O95045 317 aa7.21□□□□□ -1.26
EFCAB11-210ENST00000556078 RNFT1Q5M7Z0 435 aa7.21□□□□□ -1.26
EFCAB11-210ENST00000556078 PRR7Q8TB68 274 aa7.21□□□□□ -1.26
EFCAB11-210ENST00000556078 SOS2Q07890 1332 aaPredicted RBP7.21□□□□□ -1.26
EFCAB11-210ENST00000556078 LINC00528Q8N1L1 170 aa7.2□□□□□ -1.26
EFCAB11-210ENST00000556078 GALNT6Q8NCL4 622 aa7.2□□□□□ -1.26
EFCAB11-210ENST00000556078 SPTLC1O15269 473 aa7.19□□□□□ -1.26
EFCAB11-210ENST00000556078 NR3C2P08235 984 aa7.19□□□□□ -1.26
EFCAB11-210ENST00000556078 GRM5P41594 1212 aa7.19□□□□□ -1.26
EFCAB11-210ENST00000556078 MEIOBQ8N635 442 aa7.19□□□□□ -1.26
EFCAB11-210ENST00000556078 NANOS1Q8WY41 292 aaKnown RBP7.19□□□□□ -1.26
EFCAB11-210ENST00000556078 CCDC102AQ96A19 550 aa7.19□□□□□ -1.26
EFCAB11-210ENST00000556078 DNMT3LQ9UJW3 386 aa7.19□□□□□ -1.26
EFCAB11-210ENST00000556078 MTMR2Q13614 643 aa7.18□□□□□ -1.26
EFCAB11-210ENST00000556078 SPIRE2Q8WWL2 714 aa7.18□□□□□ -1.26
EFCAB11-210ENST00000556078 CCDC180Q9P1Z9 1646 aa7.18□□□□□ -1.26
EFCAB11-210ENST00000556078 K7ELQ4 463 aaPredicted RBP7.17□□□□□ -1.26
EFCAB11-210ENST00000556078 SLURP2P0DP57 97 aa7.17□□□□□ -1.26
EFCAB11-210ENST00000556078 ARID5BQ14865 1188 aa7.17□□□□□ -1.26
EFCAB11-210ENST00000556078 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.17□□□□□ -1.26
EFCAB11-210ENST00000556078 LYPD8Q6UX82 237 aa7.17□□□□□ -1.26
EFCAB11-210ENST00000556078 FOXJ1Q92949 421 aa7.17□□□□□ -1.26
EFCAB11-210ENST00000556078 NDUFV2P19404 249 aa7.16□□□□□ -1.26
EFCAB11-210ENST00000556078 CTHP32929 405 aa7.15□□□□□ -1.26
EFCAB11-210ENST00000556078 PTSQ03393 145 aa7.15□□□□□ -1.26
EFCAB11-210ENST00000556078 KRI1Q8N9T8 703 aaKnown RBP7.15□□□□□ -1.26
EFCAB11-210ENST00000556078 DCAF5Q96JK2 942 aa7.15□□□□□ -1.26
EFCAB11-210ENST00000556078 TSEN34Q9BSV6 310 aaKnown RBP7.15□□□□□ -1.26
EFCAB11-210ENST00000556078 MOXD2PA6NHM9 499 aa7.14□□□□□ -1.27
EFCAB11-210ENST00000556078 GJA5P36382 358 aa7.14□□□□□ -1.27
EFCAB11-210ENST00000556078 MAP3K10Q02779 954 aa7.14□□□□□ -1.27
EFCAB11-210ENST00000556078 F12P00748 615 aaPredicted RBP7.13□□□□□ -1.27
EFCAB11-210ENST00000556078 PROCP04070 461 aa7.13□□□□□ -1.27
EFCAB11-210ENST00000556078 ITGB2P05107 769 aa7.13□□□□□ -1.27
EFCAB11-210ENST00000556078 SSTR3P32745 418 aaPredicted RBP7.13□□□□□ -1.27
EFCAB11-210ENST00000556078 C4orf48Q5BLP8 95 aa7.13□□□□□ -1.27
EFCAB11-210ENST00000556078 BPHLQ86WA6 291 aaPredicted RBP7.13□□□□□ -1.27
EFCAB11-210ENST00000556078 VWA5B2Q8N398 1253 aa7.13□□□□□ -1.27
EFCAB11-210ENST00000556078 CDC14CA4D256 554 aa7.12□□□□□ -1.27
EFCAB11-210ENST00000556078 TTLL8A6PVC2 850 aa7.12□□□□□ -1.27
EFCAB11-210ENST00000556078 LYPD4Q6UWN0 246 aa7.12□□□□□ -1.27
EFCAB11-210ENST00000556078 C1QTNF2Q9BXJ5 285 aa7.12□□□□□ -1.27
EFCAB11-210ENST00000556078 MAP4K5Q9Y4K4 846 aa7.12□□□□□ -1.27
EFCAB11-210ENST00000556078 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
EFCAB11-210ENST00000556078 CCDC155Q8N6L0 562 aa7.11□□□□□ -1.27
EFCAB11-210ENST00000556078 EMILIN1Q9Y6C2 1016 aa7.11□□□□□ -1.27
EFCAB11-210ENST00000556078 RB1CC1Q8TDY2 1594 aa7.11□□□□□ -1.27
EFCAB11-210ENST00000556078 CNTNAP5Q8WYK1 1306 aa7.1□□□□□ -1.27
EFCAB11-210ENST00000556078 CC2D2AQ9P2K1 1620 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms