RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 WWC1Q8IX03 1113 aa17.94■□□□□ 0.46
SIX1-205ENST00000555955 NUP155O75694 1391 aa17.94■□□□□ 0.46
SIX1-205ENST00000555955 PIBF1Q8WXW3 757 aa17.94■□□□□ 0.46
SIX1-205ENST00000555955 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
SIX1-205ENST00000555955 FAM135AQ9P2D6 1515 aa17.94■□□□□ 0.46
SIX1-205ENST00000555955 GPT2Q8TD30 523 aa17.94■□□□□ 0.46
SIX1-205ENST00000555955 NGEFQ8N5V2 710 aa17.93■□□□□ 0.46
SIX1-205ENST00000555955 PLXNC1O60486 1568 aa17.93■□□□□ 0.46
SIX1-205ENST00000555955 MVPQ14764 893 aaKnown RBP17.93■□□□□ 0.46
SIX1-205ENST00000555955 AEBP1Q8IUX7 1158 aa17.93■□□□□ 0.46
SIX1-205ENST00000555955 NUCB2P80303 420 aa17.92■□□□□ 0.46
SIX1-205ENST00000555955 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
SIX1-205ENST00000555955 SECISBP2LQ93073 1101 aaKnown RBP17.92■□□□□ 0.46
SIX1-205ENST00000555955 PRAG1Q86YV5 1406 aa17.92■□□□□ 0.46
SIX1-205ENST00000555955 TMEM63CQ9P1W3 806 aa17.91■□□□□ 0.46
SIX1-205ENST00000555955 C17orf53Q8N3J3 647 aaPredicted RBP17.91■□□□□ 0.46
SIX1-205ENST00000555955 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
SIX1-205ENST00000555955 PIK3C2GO75747 1445 aa17.91■□□□□ 0.46
SIX1-205ENST00000555955 FEZ1Q99689 392 aa17.9■□□□□ 0.46
SIX1-205ENST00000555955 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
SIX1-205ENST00000555955 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
SIX1-205ENST00000555955 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
SIX1-205ENST00000555955 NEUROD2Q15784 382 aa17.9■□□□□ 0.46
SIX1-205ENST00000555955 ZBTB9Q96C00 473 aa17.9■□□□□ 0.46
SIX1-205ENST00000555955 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
SIX1-205ENST00000555955 PKP1Q13835 747 aa17.89■□□□□ 0.45
SIX1-205ENST00000555955 DNAJC2Q99543 621 aaKnown RBP17.89■□□□□ 0.45
SIX1-205ENST00000555955 OGFRQ9NZT2 677 aa17.89■□□□□ 0.45
SIX1-205ENST00000555955 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
SIX1-205ENST00000555955 IRX3P78415 501 aaPredicted RBP17.87■□□□□ 0.45
SIX1-205ENST00000555955 FKBP5Q13451 457 aaPredicted RBP17.87■□□□□ 0.45
SIX1-205ENST00000555955 ANKRD7Q92527 254 aa17.87■□□□□ 0.45
SIX1-205ENST00000555955 GPRASP1Q5JY77 1395 aa17.87■□□□□ 0.45
SIX1-205ENST00000555955 ANKRD50Q9ULJ7 1429 aa17.87■□□□□ 0.45
SIX1-205ENST00000555955 GABPB1Q06547 395 aaPredicted RBP17.87■□□□□ 0.45
SIX1-205ENST00000555955 CYP2E1P05181 493 aaPredicted RBP17.86■□□□□ 0.45
SIX1-205ENST00000555955 PREX2Q70Z35 1606 aa17.86■□□□□ 0.45
SIX1-205ENST00000555955 TTC12Q9H892 705 aaPredicted RBP17.86■□□□□ 0.45
SIX1-205ENST00000555955 CCDC66A2RUB6 948 aa17.85■□□□□ 0.45
SIX1-205ENST00000555955 SLC20A2Q08357 652 aa17.85■□□□□ 0.45
SIX1-205ENST00000555955 DZIP1LQ8IYY4 767 aaKnown RBP17.85■□□□□ 0.45
SIX1-205ENST00000555955 NSFL1CQ9UNZ2 370 aaKnown RBP17.85■□□□□ 0.45
SIX1-205ENST00000555955 LNPKQ9C0E8 428 aa17.85■□□□□ 0.45
SIX1-205ENST00000555955 KDM5DQ9BY66 1539 aa17.85■□□□□ 0.45
SIX1-205ENST00000555955 WDR7Q9Y4E6 1490 aa17.84■□□□□ 0.45
SIX1-205ENST00000555955 RIOK3O14730 519 aaKnown RBP17.84■□□□□ 0.45
SIX1-205ENST00000555955 SLFN14P0C7P3 912 aa17.84■□□□□ 0.45
SIX1-205ENST00000555955 CHAF1AQ13111 956 aaPredicted RBP17.84■□□□□ 0.45
SIX1-205ENST00000555955 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
SIX1-205ENST00000555955 ZKSCAN2Q63HK3 967 aa17.84■□□□□ 0.45
SIX1-205ENST00000555955 TIGD1Q96MW7 591 aa17.84■□□□□ 0.45
SIX1-205ENST00000555955 SPTLC3Q9NUV7 552 aa17.84■□□□□ 0.45
SIX1-205ENST00000555955 ABCA9Q8IUA7 1624 aa17.83■□□□□ 0.45
SIX1-205ENST00000555955 ARAP3Q8WWN8 1544 aa17.83■□□□□ 0.45
SIX1-205ENST00000555955 TEX2Q8IWB9 1127 aa17.83■□□□□ 0.45
SIX1-205ENST00000555955 TSPY26PQ9H489 355 aa17.83■□□□□ 0.45
SIX1-205ENST00000555955 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.45
SIX1-205ENST00000555955 MYO5CQ9NQX4 1742 aa17.83■□□□□ 0.44
SIX1-205ENST00000555955 VGFO15240 615 aaPredicted RBP17.83■□□□□ 0.44
SIX1-205ENST00000555955 TRERF1Q96PN7 1200 aa17.83■□□□□ 0.44
SIX1-205ENST00000555955 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
SIX1-205ENST00000555955 TTC37Q6PGP7 1564 aa17.82■□□□□ 0.44
SIX1-205ENST00000555955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
SIX1-205ENST00000555955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.82■□□□□ 0.44
SIX1-205ENST00000555955 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
SIX1-205ENST00000555955 DHX37Q8IY37 1157 aaKnown RBP17.82■□□□□ 0.44
SIX1-205ENST00000555955 RGS22Q8NE09 1264 aa17.82■□□□□ 0.44
SIX1-205ENST00000555955 PRDM15P57071 1507 aaPredicted RBP17.82■□□□□ 0.44
SIX1-205ENST00000555955 CHAMP1Q96JM3 812 aa17.81■□□□□ 0.44
SIX1-205ENST00000555955 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
SIX1-205ENST00000555955 ADGBQ8N7X0 1667 aa17.81■□□□□ 0.44
SIX1-205ENST00000555955 CHMP4CQ96CF2 233 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 NUCB1Q02818 461 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 TBC1D9Q6ZT07 1266 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 CDC42BPBQ9Y5S2 1711 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 TRIM6-TRIM34B2RNG4 842 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 ITPRIPQ8IWB1 547 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 TRIM34Q9BYJ4 488 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 ASXL1Q8IXJ9 1541 aa17.8■□□□□ 0.44
SIX1-205ENST00000555955 CTIFO43310 598 aaKnown RBP17.79■□□□□ 0.44
SIX1-205ENST00000555955 CDCA8Q53HL2 280 aa17.79■□□□□ 0.44
SIX1-205ENST00000555955 GPATCH8Q9UKJ3 1502 aaKnown RBP17.79■□□□□ 0.44
SIX1-205ENST00000555955 MBD3O95983 291 aa17.79■□□□□ 0.44
SIX1-205ENST00000555955 ADGRL2O95490 1459 aa17.79■□□□□ 0.44
SIX1-205ENST00000555955 USP25Q9UHP3 1055 aa17.78■□□□□ 0.44
SIX1-205ENST00000555955 DDX19BQ9UMR2 479 aa17.78■□□□□ 0.44
SIX1-205ENST00000555955 PLEKHD1A6NEE1 506 aa17.78■□□□□ 0.44
SIX1-205ENST00000555955 CHD1LQ86WJ1 897 aa17.78■□□□□ 0.44
SIX1-205ENST00000555955 CWC22Q9HCG8 908 aaKnown RBP17.78■□□□□ 0.44
SIX1-205ENST00000555955 CTNNA3Q9UI47 895 aa17.78■□□□□ 0.44
SIX1-205ENST00000555955 ERICH4A6NGS2 130 aa17.77■□□□□ 0.44
SIX1-205ENST00000555955 TERF2Q15554 542 aa17.77■□□□□ 0.44
SIX1-205ENST00000555955 CAPN2P17655 700 aa17.77■□□□□ 0.44
SIX1-205ENST00000555955 ZDHHC9Q9Y397 364 aa17.77■□□□□ 0.44
SIX1-205ENST00000555955 ASXL2Q76L83 1435 aa17.77■□□□□ 0.43
SIX1-205ENST00000555955 RABEP1Q15276 862 aa17.76■□□□□ 0.43
SIX1-205ENST00000555955 GLI2P10070 1586 aa17.76■□□□□ 0.43
SIX1-205ENST00000555955 ZGPATQ8N5A5 531 aaKnown RBP17.76■□□□□ 0.43
SIX1-205ENST00000555955 DDX41Q9UJV9 622 aaKnown RBP17.76■□□□□ 0.43
SIX1-205ENST00000555955 NPC1L1Q9UHC9 1359 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms