RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 ABCA6Q8N139 1617 aa9.67□□□□□ -0.86
CHD8-209ENST00000555935 IPO8O15397 1037 aaKnown RBP9.67□□□□□ -0.86
CHD8-209ENST00000555935 CFAP74Q9C0B2 1584 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 REREQ9P2R6 1566 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 TET3O43151 1660 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 BAG4O95429 457 aaKnown RBP9.66□□□□□ -0.86
CHD8-209ENST00000555935 NSD2O96028 1365 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 NOS1P29475 1434 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 MCM5P33992 734 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 MTHFSP49914 203 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 IL16Q14005 1332 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 CFAP70Q5T0N1 1121 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 SSFA2P28290 1259 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 SSH1Q8WYL5 1049 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 PDLIM2Q96JY6 352 aa9.66□□□□□ -0.86
CHD8-209ENST00000555935 NUCB2P80303 420 aa9.65□□□□□ -0.86
CHD8-209ENST00000555935 EXOSC9Q06265 439 aaKnown RBP9.65□□□□□ -0.86
CHD8-209ENST00000555935 CFAP44Q96MT7 982 aa9.65□□□□□ -0.86
CHD8-209ENST00000555935 CHMP4BQ9H444 224 aaKnown RBP9.65□□□□□ -0.86
CHD8-209ENST00000555935 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
CHD8-209ENST00000555935 NRXN1Q9ULB1 1477 aa9.65□□□□□ -0.86
CHD8-209ENST00000555935 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.87
CHD8-209ENST00000555935 GCC1Q96CN9 775 aa9.65□□□□□ -0.87
CHD8-209ENST00000555935 PLCH2O75038 1416 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 PRDM4Q9UKN5 801 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 NOB1Q9ULX3 412 aaKnown RBP9.64□□□□□ -0.87
CHD8-209ENST00000555935 SETBP1Q9Y6X0 1596 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 ABCC1P33527 1531 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 DYNC1I1O14576 645 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
CHD8-209ENST00000555935 TNNT2P45379 298 aaPredicted RBP9.64□□□□□ -0.87
CHD8-209ENST00000555935 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHD8-209ENST00000555935 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 GAS2L2Q8NHY3 880 aa9.64□□□□□ -0.87
CHD8-209ENST00000555935 R3HCC1Q9Y3T6 440 aaKnown RBP9.64□□□□□ -0.87
CHD8-209ENST00000555935 CD2BP2O95400 341 aaKnown RBP9.63□□□□□ -0.87
CHD8-209ENST00000555935 ALDH1L2Q3SY69 923 aa9.63□□□□□ -0.87
CHD8-209ENST00000555935 SMAP1Q8IYB5 467 aaPredicted RBP9.63□□□□□ -0.87
CHD8-209ENST00000555935 TSR2Q969E8 191 aaKnown RBP9.63□□□□□ -0.87
CHD8-209ENST00000555935 ADGRF5Q8IZF2 1346 aa9.63□□□□□ -0.87
CHD8-209ENST00000555935 ZSCAN23Q3MJ62 389 aa9.63□□□□□ -0.87
CHD8-209ENST00000555935 PUS7Q96PZ0 661 aaKnown RBP9.63□□□□□ -0.87
CHD8-209ENST00000555935 ZKSCAN5Q9Y2L8 839 aa9.63□□□□□ -0.87
CHD8-209ENST00000555935 VWDEQ8N2E2 1590 aa9.63□□□□□ -0.87
CHD8-209ENST00000555935 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
CHD8-209ENST00000555935 MED14O60244 1454 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 UQCRHLA0A096LP55 91 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 UQCRHP07919 91 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 RBM10P98175 930 aaKnown RBP9.62□□□□□ -0.87
CHD8-209ENST00000555935 RABEP1Q15276 862 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 TBC1D9Q6ZT07 1266 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 ZNF428Q96B54 188 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 FAM13BQ9NYF5 915 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 TRAPPC8Q9Y2L5 1435 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 CYP2E1P05181 493 aaPredicted RBP9.62□□□□□ -0.87
CHD8-209ENST00000555935 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
CHD8-209ENST00000555935 SLC12A5Q9H2X9 1139 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 CWC22Q9HCG8 908 aaKnown RBP9.62□□□□□ -0.87
CHD8-209ENST00000555935 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
CHD8-209ENST00000555935 SPAG9O60271 1321 aaKnown RBP9.61□□□□□ -0.87
CHD8-209ENST00000555935 CDC45O75419 566 aa9.61□□□□□ -0.87
CHD8-209ENST00000555935 TMPOP42166 694 aaKnown RBP9.61□□□□□ -0.87
CHD8-209ENST00000555935 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
CHD8-209ENST00000555935 CAVIN1Q6NZI2 390 aaKnown RBP9.61□□□□□ -0.87
CHD8-209ENST00000555935 LMBRD1Q9NUN5 540 aa9.61□□□□□ -0.87
CHD8-209ENST00000555935 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.61□□□□□ -0.87
CHD8-209ENST00000555935 CD109Q6YHK3 1445 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 ZFYVE16Q7Z3T8 1539 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 IFT172Q9UG01 1749 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 SASS6Q6UVJ0 657 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 RBSNQ9H1K0 784 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 TRIM35Q9UPQ4 493 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 ZC3H13Q5T200 1668 aaKnown RBP9.6□□□□□ -0.87
CHD8-209ENST00000555935 ANKRD45Q5TZF3 282 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 MCTP1Q6DN14 999 aa9.6□□□□□ -0.87
CHD8-209ENST00000555935 ANKRD36BQ8N2N9 1353 aa9.59□□□□□ -0.87
CHD8-209ENST00000555935 RBM42Q9BTD8 480 aaKnown RBP9.59□□□□□ -0.87
CHD8-209ENST00000555935 PIK3R4Q99570 1358 aa9.59□□□□□ -0.87
CHD8-209ENST00000555935 NCLP19338 710 aaKnown RBP9.59□□□□□ -0.87
CHD8-209ENST00000555935 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
CHD8-209ENST00000555935 PPIP5K1Q6PFW1 1433 aa9.59□□□□□ -0.87
CHD8-209ENST00000555935 QRICH2Q9H0J4 1663 aa9.58□□□□□ -0.88
CHD8-209ENST00000555935 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
CHD8-209ENST00000555935 LRSAM1Q6UWE0 723 aa9.58□□□□□ -0.88
CHD8-209ENST00000555935 ARHGAP45Q92619 1136 aa9.58□□□□□ -0.88
CHD8-209ENST00000555935 KIF1BO60333 1816 aa9.58□□□□□ -0.88
CHD8-209ENST00000555935 ZBTB7BO15156 539 aaPredicted RBP9.57□□□□□ -0.88
CHD8-209ENST00000555935 FANCAO15360 1455 aa9.57□□□□□ -0.88
CHD8-209ENST00000555935 ARAP3Q8WWN8 1544 aa9.57□□□□□ -0.88
CHD8-209ENST00000555935 PTCH1Q13635 1447 aa9.57□□□□□ -0.88
CHD8-209ENST00000555935 COL3A1P02461 1466 aaPredicted RBP9.56□□□□□ -0.88
CHD8-209ENST00000555935 MBD3O95983 291 aa9.56□□□□□ -0.88
CHD8-209ENST00000555935 UTP14CQ5TAP6 766 aaKnown RBP9.56□□□□□ -0.88
CHD8-209ENST00000555935 C14orf93Q9H972 538 aaKnown RBP9.56□□□□□ -0.88
CHD8-209ENST00000555935 PPRC1Q5VV67 1664 aaKnown RBP9.56□□□□□ -0.88
CHD8-209ENST00000555935 YEATS2Q9ULM3 1422 aa9.56□□□□□ -0.88
CHD8-209ENST00000555935 CCDC94Q9BW85 323 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms