RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 SPATA31A7Q8IWB4 1347 aa28.22■■■□□ 2.11
SUPT16H-203ENST00000555752 TNS1Q9HBL0 1735 aaKnown RBP28.21■■■□□ 2.11
SUPT16H-203ENST00000555752 MINK1Q8N4C8 1332 aaPredicted RBP28.2■■■□□ 2.11
SUPT16H-203ENST00000555752 ACIN1Q9UKV3 1341 aaKnown RBP28.2■■■□□ 2.11
SUPT16H-203ENST00000555752 TRAK1Q9UPV9 953 aa28.2■■■□□ 2.1
SUPT16H-203ENST00000555752 CRYBG1Q9Y4K1 1723 aa28.2■■■□□ 2.1
SUPT16H-203ENST00000555752 ADGRB1O14514 1584 aa28.2■■■□□ 2.1
SUPT16H-203ENST00000555752 THSD7AQ9UPZ6 1657 aa28.19■■■□□ 2.1
SUPT16H-203ENST00000555752 GPRASP1Q5JY77 1395 aa28.19■■■□□ 2.1
SUPT16H-203ENST00000555752 EZH2Q15910 746 aaKnown RBP28.16■■■□□ 2.1
SUPT16H-203ENST00000555752 TULP4Q9NRJ4 1543 aa28.15■■■□□ 2.1
SUPT16H-203ENST00000555752 PAK3O75914 559 aaPredicted RBP28.14■■■□□ 2.1
SUPT16H-203ENST00000555752 PRDM11Q9NQV5 511 aa28.14■■■□□ 2.1
SUPT16H-203ENST00000555752 DISP2A7MBM2 1401 aa28.14■■■□□ 2.1
SUPT16H-203ENST00000555752 CHRNA2Q15822 529 aa28.11■■■□□ 2.09
SUPT16H-203ENST00000555752 NGDNQ8NEJ9 315 aaKnown RBP28.11■■■□□ 2.09
SUPT16H-203ENST00000555752 WASLO00401 505 aaPredicted RBP28.1■■■□□ 2.09
SUPT16H-203ENST00000555752 TRIM37O94972 964 aa28.1■■■□□ 2.09
SUPT16H-203ENST00000555752 SPATA31A1Q5TZJ5 1347 aa28.1■■■□□ 2.09
SUPT16H-203ENST00000555752 KIAA0232Q92628 1395 aa28.09■■■□□ 2.09
SUPT16H-203ENST00000555752 CAMKK2Q96RR4 588 aa28.08■■■□□ 2.09
SUPT16H-203ENST00000555752 STRN4Q9NRL3 753 aa28.08■■■□□ 2.09
SUPT16H-203ENST00000555752 EIF3AQ14152 1382 aaKnown RBP28.08■■■□□ 2.09
SUPT16H-203ENST00000555752 KDM2AQ9Y2K7 1162 aa28.07■■■□□ 2.08
SUPT16H-203ENST00000555752 PHRF1Q9P1Y6 1649 aaKnown RBP28.05■■■□□ 2.08
SUPT16H-203ENST00000555752 NUTM2GQ5VZR2 741 aa28.04■■■□□ 2.08
SUPT16H-203ENST00000555752 APBA3O96018 575 aa28.03■■■□□ 2.08
SUPT16H-203ENST00000555752 ZC3H6P61129 1189 aaKnown RBP28.03■■■□□ 2.08
SUPT16H-203ENST00000555752 FAM196AQ6ZSG2 479 aa28.03■■■□□ 2.08
SUPT16H-203ENST00000555752 USP35Q9P2H5 1018 aa28.03■■■□□ 2.08
SUPT16H-203ENST00000555752 ATP7BP35670 1465 aa28.02■■■□□ 2.08
SUPT16H-203ENST00000555752 DCAF11Q8TEB1 546 aa28■■■□□ 2.07
SUPT16H-203ENST00000555752 NUDT16Q96DE0 195 aaKnown RBP27.99■■■□□ 2.07
SUPT16H-203ENST00000555752 ITSN1Q15811 1721 aa27.98■■■□□ 2.07
SUPT16H-203ENST00000555752 ARHGEF28Q8N1W1 1705 aaKnown RBP27.98■■■□□ 2.07
SUPT16H-203ENST00000555752 RREB1Q92766 1687 aa27.97■■■□□ 2.07
SUPT16H-203ENST00000555752 NUP188Q5SRE5 1749 aa27.96■■■□□ 2.07
SUPT16H-203ENST00000555752 SSH2Q76I76 1423 aa27.95■■■□□ 2.07
SUPT16H-203ENST00000555752 RAB3GAP2Q9H2M9 1393 aa27.94■■■□□ 2.06
SUPT16H-203ENST00000555752 EVA1CP58658 441 aa27.93■■■□□ 2.06
SUPT16H-203ENST00000555752 LARP1Q6PKG0 1096 aaKnown RBP27.93■■■□□ 2.06
SUPT16H-203ENST00000555752 PARD3Q8TEW0 1356 aa27.93■■■□□ 2.06
SUPT16H-203ENST00000555752 CAMTA1Q9Y6Y1 1673 aa27.93■■■□□ 2.06
SUPT16H-203ENST00000555752 PDE3BQ13370 1112 aa27.92■■■□□ 2.06
SUPT16H-203ENST00000555752 BARGINQ6ZT62 677 aa27.92■■■□□ 2.06
SUPT16H-203ENST00000555752 NRKQ7Z2Y5 1582 aa27.91■■■□□ 2.06
SUPT16H-203ENST00000555752 CDK19Q9BWU1 502 aa27.91■■■□□ 2.06
SUPT16H-203ENST00000555752 TOPAZ1Q8N9V7 1692 aa27.9■■■□□ 2.06
SUPT16H-203ENST00000555752 ACEP12821 1306 aa27.9■■■□□ 2.06
SUPT16H-203ENST00000555752 POLR3AO14802 1390 aaPredicted RBP27.88■■■□□ 2.05
SUPT16H-203ENST00000555752 NBPF8Q3BBV2 869 aa27.88■■■□□ 2.05
SUPT16H-203ENST00000555752 LMO7Q8WWI1 1683 aa27.87■■■□□ 2.05
SUPT16H-203ENST00000555752 YY1P25490 414 aa27.87■■■□□ 2.05
SUPT16H-203ENST00000555752 TCP11L2Q8N4U5 519 aa27.86■■■□□ 2.05
SUPT16H-203ENST00000555752 NBPF14Q5TI25 921 aa27.85■■■□□ 2.05
SUPT16H-203ENST00000555752 ABTB2Q8N961 1025 aa27.84■■■□□ 2.05
SUPT16H-203ENST00000555752 CCDC61Q9Y6R9 512 aa27.82■■■□□ 2.04
SUPT16H-203ENST00000555752 CPDO75976 1380 aa27.82■■■□□ 2.04
SUPT16H-203ENST00000555752 PLEKHG3A1L390 1219 aa27.81■■■□□ 2.04
SUPT16H-203ENST00000555752 USP19O94966 1318 aa27.81■■■□□ 2.04
SUPT16H-203ENST00000555752 PARP4Q9UKK3 1724 aaKnown RBP27.79■■■□□ 2.04
SUPT16H-203ENST00000555752 PPP1R1BQ9UD71 204 aaPredicted RBP27.79■■■□□ 2.04
SUPT16H-203ENST00000555752 COL5A2P05997 1499 aaPredicted RBP27.78■■■□□ 2.04
SUPT16H-203ENST00000555752 STAC3Q96MF2 364 aa27.78■■■□□ 2.04
SUPT16H-203ENST00000555752 SPON1Q9HCB6 807 aa27.78■■■□□ 2.04
SUPT16H-203ENST00000555752 KCNQ2O43526 872 aa27.77■■■□□ 2.04
SUPT16H-203ENST00000555752 GCP02774 474 aa27.77■■■□□ 2.04
SUPT16H-203ENST00000555752 THRAP3Q9Y2W1 955 aaKnown RBP27.76■■■□□ 2.03
SUPT16H-203ENST00000555752 PEAK1Q9H792 1746 aa27.75■■■□□ 2.03
SUPT16H-203ENST00000555752 ZBTB7CA1YPR0 619 aa27.74■■■□□ 2.03
SUPT16H-203ENST00000555752 PTF1AQ7RTS3 328 aa27.73■■■□□ 2.03
SUPT16H-203ENST00000555752 NLRP13Q86W25 1043 aa27.73■■■□□ 2.03
SUPT16H-203ENST00000555752 PPIP5K1Q6PFW1 1433 aa27.72■■■□□ 2.03
SUPT16H-203ENST00000555752 SBF2Q86WG5 1849 aa27.71■■■□□ 2.03
SUPT16H-203ENST00000555752 LRRC37A3O60309 1634 aa27.71■■■□□ 2.03
SUPT16H-203ENST00000555752 CRB1P82279 1406 aa27.71■■■□□ 2.03
SUPT16H-203ENST00000555752 ANO8Q9HCE9 1232 aaPredicted RBP27.71■■■□□ 2.03
SUPT16H-203ENST00000555752 OVOS2A0A0G2JMS6 1433 aa27.7■■■□□ 2.03
SUPT16H-203ENST00000555752 OVOS2A0A0J9YW53 1432 aa27.7■■■□□ 2.03
SUPT16H-203ENST00000555752 OVOS2Q6IE36 1432 aa27.7■■■□□ 2.03
SUPT16H-203ENST00000555752 NBPF1Q3BBV0 1214 aa27.7■■■□□ 2.02
SUPT16H-203ENST00000555752 PDGFDQ9GZP0 370 aaPredicted RBP27.7■■■□□ 2.02
SUPT16H-203ENST00000555752 SRPK2P78362 688 aaKnown RBP27.69■■■□□ 2.02
SUPT16H-203ENST00000555752 CABP2Q9NPB3 220 aa27.69■■■□□ 2.02
SUPT16H-203ENST00000555752 NINLQ9Y2I6 1382 aa27.69■■■□□ 2.02
SUPT16H-203ENST00000555752 KIAA1210Q9ULL0 1709 aa27.67■■■□□ 2.02
SUPT16H-203ENST00000555752 RGPD3A6NKT7 1758 aaPredicted RBP27.66■■■□□ 2.02
SUPT16H-203ENST00000555752 RGPD4Q7Z3J3 1758 aa27.66■■■□□ 2.02
SUPT16H-203ENST00000555752 CASZ1Q86V15 1759 aa27.66■■■□□ 2.02
SUPT16H-203ENST00000555752 PLSCR1O15162 318 aa27.65■■■□□ 2.02
SUPT16H-203ENST00000555752 DDB1Q16531 1140 aa27.64■■■□□ 2.02
SUPT16H-203ENST00000555752 AATKQ6ZMQ8 1374 aa27.63■■■□□ 2.01
SUPT16H-203ENST00000555752 NLRP6P59044 892 aa27.63■■■□□ 2.01
SUPT16H-203ENST00000555752 SLIT3O75094 1523 aa27.62■■■□□ 2.01
SUPT16H-203ENST00000555752 DCAF8L1A6NGE4 600 aa27.62■■■□□ 2.01
SUPT16H-203ENST00000555752 C11orf95C9JLR9 678 aaPredicted RBP27.62■■■□□ 2.01
SUPT16H-203ENST00000555752 TOM1L2Q6ZVM7 507 aa27.62■■■□□ 2.01
SUPT16H-203ENST00000555752 PROM2Q8N271 834 aa27.62■■■□□ 2.01
SUPT16H-203ENST00000555752 COL18A1P39060 1754 aa27.62■■■□□ 2.01
SUPT16H-203ENST00000555752 USP6P35125 1406 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms