RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 TRIM37O94972 964 aa16.02■□□□□ 0.16
TDP1-212ENST00000555565 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
TDP1-212ENST00000555565 ALS2Q96Q42 1657 aa16.02■□□□□ 0.15
TDP1-212ENST00000555565 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
TDP1-212ENST00000555565 SPATA31A1Q5TZJ5 1347 aa16.01■□□□□ 0.15
TDP1-212ENST00000555565 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
TDP1-212ENST00000555565 FAM196AQ6ZSG2 479 aa16■□□□□ 0.15
TDP1-212ENST00000555565 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
TDP1-212ENST00000555565 CRYBG1Q9Y4K1 1723 aa15.99■□□□□ 0.15
TDP1-212ENST00000555565 PARD3Q8TEW0 1356 aa15.99■□□□□ 0.15
TDP1-212ENST00000555565 APBA3O96018 575 aa15.98■□□□□ 0.15
TDP1-212ENST00000555565 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
TDP1-212ENST00000555565 DLC1Q96QB1 1528 aa15.96■□□□□ 0.15
TDP1-212ENST00000555565 PRDM11Q9NQV5 511 aa15.96■□□□□ 0.15
TDP1-212ENST00000555565 GPRASP1Q5JY77 1395 aa15.95■□□□□ 0.14
TDP1-212ENST00000555565 RREB1Q92766 1687 aa15.95■□□□□ 0.14
TDP1-212ENST00000555565 CHRNA2Q15822 529 aa15.94■□□□□ 0.14
TDP1-212ENST00000555565 HIRIP3Q9BW71 556 aaPredicted RBP15.94■□□□□ 0.14
TDP1-212ENST00000555565 POGKQ9P215 609 aa15.94■□□□□ 0.14
TDP1-212ENST00000555565 KIAA0232Q92628 1395 aa15.94■□□□□ 0.14
TDP1-212ENST00000555565 BARGINQ6ZT62 677 aa15.93■□□□□ 0.14
TDP1-212ENST00000555565 UTRNP46939 3433 aa15.93■□□□□ 0.14
TDP1-212ENST00000555565 ADGRB1O14514 1584 aa15.92■□□□□ 0.14
TDP1-212ENST00000555565 NUP188Q5SRE5 1749 aa15.92■□□□□ 0.14
TDP1-212ENST00000555565 WASLO00401 505 aaPredicted RBP15.91■□□□□ 0.14
TDP1-212ENST00000555565 KCNQ2O43526 872 aa15.91■□□□□ 0.14
TDP1-212ENST00000555565 SPON1Q9HCB6 807 aa15.91■□□□□ 0.14
TDP1-212ENST00000555565 STRN4Q9NRL3 753 aa15.91■□□□□ 0.14
TDP1-212ENST00000555565 TULP4Q9NRJ4 1543 aa15.9■□□□□ 0.14
TDP1-212ENST00000555565 PAK3O75914 559 aaPredicted RBP15.9■□□□□ 0.14
TDP1-212ENST00000555565 NBPF8Q3BBV2 869 aa15.9■□□□□ 0.14
TDP1-212ENST00000555565 NBPF14Q5TI25 921 aa15.9■□□□□ 0.14
TDP1-212ENST00000555565 NGDNQ8NEJ9 315 aaKnown RBP15.9■□□□□ 0.14
TDP1-212ENST00000555565 MINK1Q8N4C8 1332 aaPredicted RBP15.9■□□□□ 0.14
TDP1-212ENST00000555565 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
TDP1-212ENST00000555565 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
TDP1-212ENST00000555565 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
TDP1-212ENST00000555565 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
TDP1-212ENST00000555565 PDE3BQ13370 1112 aa15.88■□□□□ 0.13
TDP1-212ENST00000555565 LARP1Q6PKG0 1096 aaKnown RBP15.88■□□□□ 0.13
TDP1-212ENST00000555565 SSH2Q76I76 1423 aa15.87■□□□□ 0.13
TDP1-212ENST00000555565 EIF3AQ14152 1382 aaKnown RBP15.87■□□□□ 0.13
TDP1-212ENST00000555565 CAMTA1Q9Y6Y1 1673 aa15.86■□□□□ 0.13
TDP1-212ENST00000555565 NUTM2GQ5VZR2 741 aa15.85■□□□□ 0.13
TDP1-212ENST00000555565 TCP11L2Q8N4U5 519 aa15.85■□□□□ 0.13
TDP1-212ENST00000555565 PPP1R1BQ9UD71 204 aaPredicted RBP15.85■□□□□ 0.13
TDP1-212ENST00000555565 PHRF1Q9P1Y6 1649 aaKnown RBP15.85■□□□□ 0.13
TDP1-212ENST00000555565 EVA1CP58658 441 aa15.84■□□□□ 0.13
TDP1-212ENST00000555565 NUDT16Q96DE0 195 aaKnown RBP15.84■□□□□ 0.13
TDP1-212ENST00000555565 PDGFDQ9GZP0 370 aaPredicted RBP15.84■□□□□ 0.13
TDP1-212ENST00000555565 ATP7BP35670 1465 aa15.84■□□□□ 0.13
TDP1-212ENST00000555565 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
TDP1-212ENST00000555565 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
TDP1-212ENST00000555565 KDM2AQ9Y2K7 1162 aa15.83■□□□□ 0.12
TDP1-212ENST00000555565 PLSCR1O15162 318 aa15.82■□□□□ 0.12
TDP1-212ENST00000555565 ZNF784Q8NCA9 323 aaPredicted RBP15.82■□□□□ 0.12
TDP1-212ENST00000555565 THRAP3Q9Y2W1 955 aaKnown RBP15.82■□□□□ 0.12
TDP1-212ENST00000555565 POLR3AO14802 1390 aaPredicted RBP15.82■□□□□ 0.12
TDP1-212ENST00000555565 LMO7Q8WWI1 1683 aa15.82■□□□□ 0.12
TDP1-212ENST00000555565 CPDO75976 1380 aa15.81■□□□□ 0.12
TDP1-212ENST00000555565 PTF1AQ7RTS3 328 aa15.81■□□□□ 0.12
TDP1-212ENST00000555565 PROM2Q8N271 834 aa15.81■□□□□ 0.12
TDP1-212ENST00000555565 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
TDP1-212ENST00000555565 PTGER2P43116 358 aa15.8■□□□□ 0.12
TDP1-212ENST00000555565 PEAK1Q9H792 1746 aa15.8■□□□□ 0.12
TDP1-212ENST00000555565 USP19O94966 1318 aa15.79■□□□□ 0.12
TDP1-212ENST00000555565 ACEP12821 1306 aa15.79■□□□□ 0.12
TDP1-212ENST00000555565 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
TDP1-212ENST00000555565 CASZ1Q86V15 1759 aa15.79■□□□□ 0.12
TDP1-212ENST00000555565 NRKQ7Z2Y5 1582 aa15.79■□□□□ 0.12
TDP1-212ENST00000555565 PARP4Q9UKK3 1724 aaKnown RBP15.78■□□□□ 0.12
TDP1-212ENST00000555565 PLEKHG3A1L390 1219 aa15.78■□□□□ 0.12
TDP1-212ENST00000555565 C11orf95C9JLR9 678 aaPredicted RBP15.77■□□□□ 0.12
TDP1-212ENST00000555565 CDK19Q9BWU1 502 aa15.77■□□□□ 0.12
TDP1-212ENST00000555565 COL5A2P05997 1499 aaPredicted RBP15.77■□□□□ 0.11
TDP1-212ENST00000555565 GCP02774 474 aa15.76■□□□□ 0.11
TDP1-212ENST00000555565 ABTB2Q8N961 1025 aa15.76■□□□□ 0.11
TDP1-212ENST00000555565 RGPD3A6NKT7 1758 aaPredicted RBP15.75■□□□□ 0.11
TDP1-212ENST00000555565 RGPD4Q7Z3J3 1758 aa15.75■□□□□ 0.11
TDP1-212ENST00000555565 ZBTB7AO95365 584 aa15.75■□□□□ 0.11
TDP1-212ENST00000555565 BCL11BQ9C0K0 894 aaPredicted RBP15.75■□□□□ 0.11
TDP1-212ENST00000555565 CCDC61Q9Y6R9 512 aa15.75■□□□□ 0.11
TDP1-212ENST00000555565 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
TDP1-212ENST00000555565 OVOS2A0A0J9YW53 1432 aa15.75■□□□□ 0.11
TDP1-212ENST00000555565 OVOS2Q6IE36 1432 aa15.75■□□□□ 0.11
TDP1-212ENST00000555565 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
TDP1-212ENST00000555565 SYT17Q9BSW7 474 aa15.74■□□□□ 0.11
TDP1-212ENST00000555565 SBF2Q86WG5 1849 aa15.73■□□□□ 0.11
TDP1-212ENST00000555565 SGIP1Q9BQI5 828 aa15.73■□□□□ 0.11
TDP1-212ENST00000555565 CRB1P82279 1406 aa15.73■□□□□ 0.11
TDP1-212ENST00000555565 MYOM1P52179 1685 aa15.73■□□□□ 0.11
TDP1-212ENST00000555565 TOPAZ1Q8N9V7 1692 aa15.73■□□□□ 0.11
TDP1-212ENST00000555565 ARHGEF28Q8N1W1 1705 aaKnown RBP15.72■□□□□ 0.11
TDP1-212ENST00000555565 MARCH10Q8NA82 808 aaPredicted RBP15.72■□□□□ 0.11
TDP1-212ENST00000555565 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
TDP1-212ENST00000555565 BCL9O00512 1426 aa15.71■□□□□ 0.11
TDP1-212ENST00000555565 C1QTNF8P60827 252 aa15.71■□□□□ 0.11
TDP1-212ENST00000555565 FHDC1Q9C0D6 1143 aaPredicted RBP15.71■□□□□ 0.11
TDP1-212ENST00000555565 LRRC37A3O60309 1634 aa15.7■□□□□ 0.1
TDP1-212ENST00000555565 DDB1Q16531 1140 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms