RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 PRDM11Q9NQV5 511 aa19.66■□□□□ 0.74
TUBB3-207ENST00000554927 DISP2A7MBM2 1401 aa19.66■□□□□ 0.74
TUBB3-207ENST00000554927 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
TUBB3-207ENST00000554927 APBA3O96018 575 aa19.64■□□□□ 0.73
TUBB3-207ENST00000554927 CAMKK2Q96RR4 588 aa19.64■□□□□ 0.73
TUBB3-207ENST00000554927 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
TUBB3-207ENST00000554927 FAM196AQ6ZSG2 479 aa19.63■□□□□ 0.73
TUBB3-207ENST00000554927 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
TUBB3-207ENST00000554927 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
TUBB3-207ENST00000554927 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
TUBB3-207ENST00000554927 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
TUBB3-207ENST00000554927 TNS1Q9HBL0 1735 aaKnown RBP19.61■□□□□ 0.73
TUBB3-207ENST00000554927 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
TUBB3-207ENST00000554927 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
TUBB3-207ENST00000554927 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
TUBB3-207ENST00000554927 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
TUBB3-207ENST00000554927 CHRNA2Q15822 529 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 NBPF14Q5TI25 921 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 USP35Q9P2H5 1018 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 PPP1R1BQ9UD71 204 aaPredicted RBP19.59■□□□□ 0.73
TUBB3-207ENST00000554927 TRAK1Q9UPV9 953 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 PARD3Q8TEW0 1356 aa19.58■□□□□ 0.73
TUBB3-207ENST00000554927 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
TUBB3-207ENST00000554927 PDE3BQ13370 1112 aa19.58■□□□□ 0.72
TUBB3-207ENST00000554927 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
TUBB3-207ENST00000554927 PRR36Q9H6K5 1346 aa19.57■□□□□ 0.72
TUBB3-207ENST00000554927 DLC1Q96QB1 1528 aa19.57■□□□□ 0.72
TUBB3-207ENST00000554927 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
TUBB3-207ENST00000554927 EVA1CP58658 441 aa19.55■□□□□ 0.72
TUBB3-207ENST00000554927 ZC3H6P61129 1189 aaKnown RBP19.55■□□□□ 0.72
TUBB3-207ENST00000554927 WASLO00401 505 aaPredicted RBP19.54■□□□□ 0.72
TUBB3-207ENST00000554927 TULP4Q9NRJ4 1543 aa19.54■□□□□ 0.72
TUBB3-207ENST00000554927 NUTM2GQ5VZR2 741 aa19.53■□□□□ 0.72
TUBB3-207ENST00000554927 SPON1Q9HCB6 807 aa19.52■□□□□ 0.72
TUBB3-207ENST00000554927 CRYBG1Q9Y4K1 1723 aa19.49■□□□□ 0.71
TUBB3-207ENST00000554927 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
TUBB3-207ENST00000554927 KCNQ2O43526 872 aa19.48■□□□□ 0.71
TUBB3-207ENST00000554927 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
TUBB3-207ENST00000554927 TCP11L2Q8N4U5 519 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 ADGRB1O14514 1584 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 RREB1Q92766 1687 aa19.46■□□□□ 0.71
TUBB3-207ENST00000554927 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
TUBB3-207ENST00000554927 NINLQ9Y2I6 1382 aa19.45■□□□□ 0.7
TUBB3-207ENST00000554927 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
TUBB3-207ENST00000554927 PHRF1Q9P1Y6 1649 aaKnown RBP19.44■□□□□ 0.7
TUBB3-207ENST00000554927 ATP7BP35670 1465 aa19.44■□□□□ 0.7
TUBB3-207ENST00000554927 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
TUBB3-207ENST00000554927 ABTB2Q8N961 1025 aa19.41■□□□□ 0.7
TUBB3-207ENST00000554927 C11orf95C9JLR9 678 aaPredicted RBP19.4■□□□□ 0.7
TUBB3-207ENST00000554927 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
TUBB3-207ENST00000554927 CAMTA1Q9Y6Y1 1673 aa19.4■□□□□ 0.7
TUBB3-207ENST00000554927 ZBTB7CA1YPR0 619 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 CDK19Q9BWU1 502 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 ACEP12821 1306 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 ITSN1Q15811 1721 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 NRKQ7Z2Y5 1582 aa19.36■□□□□ 0.69
TUBB3-207ENST00000554927 CPDO75976 1380 aa19.36■□□□□ 0.69
TUBB3-207ENST00000554927 BCL11BQ9C0K0 894 aaPredicted RBP19.36■□□□□ 0.69
TUBB3-207ENST00000554927 OVOS2A0A0G2JMS6 1433 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 OVOS2A0A0J9YW53 1432 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 OVOS2Q6IE36 1432 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
TUBB3-207ENST00000554927 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 ZBTB7AO95365 584 aa19.34■□□□□ 0.69
TUBB3-207ENST00000554927 GCP02774 474 aa19.34■□□□□ 0.69
TUBB3-207ENST00000554927 NLRP13Q86W25 1043 aa19.34■□□□□ 0.69
TUBB3-207ENST00000554927 ANO8Q9HCE9 1232 aaPredicted RBP19.34■□□□□ 0.69
TUBB3-207ENST00000554927 USP19O94966 1318 aa19.33■□□□□ 0.69
TUBB3-207ENST00000554927 PLSCR1O15162 318 aa19.33■□□□□ 0.68
TUBB3-207ENST00000554927 DDB1Q16531 1140 aa19.32■□□□□ 0.68
TUBB3-207ENST00000554927 COL5A2P05997 1499 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-207ENST00000554927 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
TUBB3-207ENST00000554927 CRB1P82279 1406 aa19.32■□□□□ 0.68
TUBB3-207ENST00000554927 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
TUBB3-207ENST00000554927 ZNF784Q8NCA9 323 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-207ENST00000554927 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
TUBB3-207ENST00000554927 PARP4Q9UKK3 1724 aaKnown RBP19.31■□□□□ 0.68
TUBB3-207ENST00000554927 PDGFDQ9GZP0 370 aaPredicted RBP19.3■□□□□ 0.68
TUBB3-207ENST00000554927 ATF5Q9Y2D1 282 aaPredicted RBP19.3■□□□□ 0.68
TUBB3-207ENST00000554927 ARHGEF28Q8N1W1 1705 aaKnown RBP19.3■□□□□ 0.68
TUBB3-207ENST00000554927 TOM1L2Q6ZVM7 507 aa19.29■□□□□ 0.68
TUBB3-207ENST00000554927 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
TUBB3-207ENST00000554927 SRPK2P78362 688 aaKnown RBP19.28■□□□□ 0.68
TUBB3-207ENST00000554927 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
TUBB3-207ENST00000554927 STK32BQ9NY57 414 aa19.28■□□□□ 0.68
TUBB3-207ENST00000554927 TOPAZ1Q8N9V7 1692 aa19.27■□□□□ 0.68
TUBB3-207ENST00000554927 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
TUBB3-207ENST00000554927 RGPD3A6NKT7 1758 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-207ENST00000554927 RGPD4Q7Z3J3 1758 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 PTGER2P43116 358 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 NLRP6P59044 892 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 FHDC1Q9C0D6 1143 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-207ENST00000554927 PEAK1Q9H792 1746 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 CASZ1Q86V15 1759 aa19.24■□□□□ 0.67
TUBB3-207ENST00000554927 PROM2Q8N271 834 aa19.24■□□□□ 0.67
TUBB3-207ENST00000554927 LRRC37A3O60309 1634 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms