RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 PRDM11Q9NQV5 511 aa19.66■□□□□ 0.74
TUBB3-207ENST00000554927 DISP2A7MBM2 1401 aa19.66■□□□□ 0.74
TUBB3-207ENST00000554927 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
TUBB3-207ENST00000554927 APBA3O96018 575 aa19.64■□□□□ 0.73
TUBB3-207ENST00000554927 CAMKK2Q96RR4 588 aa19.64■□□□□ 0.73
TUBB3-207ENST00000554927 ACIN1Q9UKV3 1341 aaKnown RBP19.63■□□□□ 0.73
TUBB3-207ENST00000554927 FAM196AQ6ZSG2 479 aa19.63■□□□□ 0.73
TUBB3-207ENST00000554927 ADGRB2O60241 1585 aa19.62■□□□□ 0.73
TUBB3-207ENST00000554927 NGDNQ8NEJ9 315 aaKnown RBP19.62■□□□□ 0.73
TUBB3-207ENST00000554927 STRN4Q9NRL3 753 aa19.62■□□□□ 0.73
TUBB3-207ENST00000554927 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
TUBB3-207ENST00000554927 TNS1Q9HBL0 1735 aaKnown RBP19.61■□□□□ 0.73
TUBB3-207ENST00000554927 EIF3AQ14152 1382 aaKnown RBP19.6■□□□□ 0.73
TUBB3-207ENST00000554927 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
TUBB3-207ENST00000554927 THSD7AQ9UPZ6 1657 aa19.6■□□□□ 0.73
TUBB3-207ENST00000554927 TRPM3Q9HCF6 1732 aaPredicted RBP19.59■□□□□ 0.73
TUBB3-207ENST00000554927 CHRNA2Q15822 529 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 NBPF14Q5TI25 921 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 USP35Q9P2H5 1018 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 PPP1R1BQ9UD71 204 aaPredicted RBP19.59■□□□□ 0.73
TUBB3-207ENST00000554927 TRAK1Q9UPV9 953 aa19.59■□□□□ 0.73
TUBB3-207ENST00000554927 PARD3Q8TEW0 1356 aa19.58■□□□□ 0.73
TUBB3-207ENST00000554927 DCAF8L1A6NGE4 600 aa19.58■□□□□ 0.72
TUBB3-207ENST00000554927 PDE3BQ13370 1112 aa19.58■□□□□ 0.72
TUBB3-207ENST00000554927 ALS2Q96Q42 1657 aa19.58■□□□□ 0.72
TUBB3-207ENST00000554927 PRR36Q9H6K5 1346 aa19.57■□□□□ 0.72
TUBB3-207ENST00000554927 DLC1Q96QB1 1528 aa19.57■□□□□ 0.72
TUBB3-207ENST00000554927 KIAA0232Q92628 1395 aa19.57■□□□□ 0.72
TUBB3-207ENST00000554927 EVA1CP58658 441 aa19.55■□□□□ 0.72
TUBB3-207ENST00000554927 ZC3H6P61129 1189 aaKnown RBP19.55■□□□□ 0.72
TUBB3-207ENST00000554927 WASLO00401 505 aaPredicted RBP19.54■□□□□ 0.72
TUBB3-207ENST00000554927 TULP4Q9NRJ4 1543 aa19.54■□□□□ 0.72
TUBB3-207ENST00000554927 NUTM2GQ5VZR2 741 aa19.53■□□□□ 0.72
TUBB3-207ENST00000554927 SPON1Q9HCB6 807 aa19.52■□□□□ 0.72
TUBB3-207ENST00000554927 CRYBG1Q9Y4K1 1723 aa19.49■□□□□ 0.71
TUBB3-207ENST00000554927 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
TUBB3-207ENST00000554927 KCNQ2O43526 872 aa19.48■□□□□ 0.71
TUBB3-207ENST00000554927 LARP1Q6PKG0 1096 aaKnown RBP19.47■□□□□ 0.71
TUBB3-207ENST00000554927 TCP11L2Q8N4U5 519 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 KDM2AQ9Y2K7 1162 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 ADGRB1O14514 1584 aa19.47■□□□□ 0.71
TUBB3-207ENST00000554927 RREB1Q92766 1687 aa19.46■□□□□ 0.71
TUBB3-207ENST00000554927 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
TUBB3-207ENST00000554927 NINLQ9Y2I6 1382 aa19.45■□□□□ 0.7
TUBB3-207ENST00000554927 NUP188Q5SRE5 1749 aa19.45■□□□□ 0.7
TUBB3-207ENST00000554927 PHRF1Q9P1Y6 1649 aaKnown RBP19.44■□□□□ 0.7
TUBB3-207ENST00000554927 ATP7BP35670 1465 aa19.44■□□□□ 0.7
TUBB3-207ENST00000554927 DCAF11Q8TEB1 546 aa19.42■□□□□ 0.7
TUBB3-207ENST00000554927 ABTB2Q8N961 1025 aa19.41■□□□□ 0.7
TUBB3-207ENST00000554927 C11orf95C9JLR9 678 aaPredicted RBP19.4■□□□□ 0.7
TUBB3-207ENST00000554927 THRAP3Q9Y2W1 955 aaKnown RBP19.4■□□□□ 0.7
TUBB3-207ENST00000554927 CAMTA1Q9Y6Y1 1673 aa19.4■□□□□ 0.7
TUBB3-207ENST00000554927 ZBTB7CA1YPR0 619 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 CDK19Q9BWU1 502 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 ACEP12821 1306 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 ITSN1Q15811 1721 aa19.39■□□□□ 0.69
TUBB3-207ENST00000554927 NRKQ7Z2Y5 1582 aa19.36■□□□□ 0.69
TUBB3-207ENST00000554927 CPDO75976 1380 aa19.36■□□□□ 0.69
TUBB3-207ENST00000554927 BCL11BQ9C0K0 894 aaPredicted RBP19.36■□□□□ 0.69
TUBB3-207ENST00000554927 OVOS2A0A0G2JMS6 1433 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 OVOS2A0A0J9YW53 1432 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 OVOS2Q6IE36 1432 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
TUBB3-207ENST00000554927 CCDC61Q9Y6R9 512 aa19.35■□□□□ 0.69
TUBB3-207ENST00000554927 ZBTB7AO95365 584 aa19.34■□□□□ 0.69
TUBB3-207ENST00000554927 GCP02774 474 aa19.34■□□□□ 0.69
TUBB3-207ENST00000554927 NLRP13Q86W25 1043 aa19.34■□□□□ 0.69
TUBB3-207ENST00000554927 ANO8Q9HCE9 1232 aaPredicted RBP19.34■□□□□ 0.69
TUBB3-207ENST00000554927 USP19O94966 1318 aa19.33■□□□□ 0.69
TUBB3-207ENST00000554927 PLSCR1O15162 318 aa19.33■□□□□ 0.68
TUBB3-207ENST00000554927 DDB1Q16531 1140 aa19.32■□□□□ 0.68
TUBB3-207ENST00000554927 COL5A2P05997 1499 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-207ENST00000554927 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
TUBB3-207ENST00000554927 CRB1P82279 1406 aa19.32■□□□□ 0.68
TUBB3-207ENST00000554927 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
TUBB3-207ENST00000554927 ZNF784Q8NCA9 323 aaPredicted RBP19.31■□□□□ 0.68
TUBB3-207ENST00000554927 STAC3Q96MF2 364 aa19.31■□□□□ 0.68
TUBB3-207ENST00000554927 PARP4Q9UKK3 1724 aaKnown RBP19.31■□□□□ 0.68
TUBB3-207ENST00000554927 PDGFDQ9GZP0 370 aaPredicted RBP19.3■□□□□ 0.68
TUBB3-207ENST00000554927 ATF5Q9Y2D1 282 aaPredicted RBP19.3■□□□□ 0.68
TUBB3-207ENST00000554927 ARHGEF28Q8N1W1 1705 aaKnown RBP19.3■□□□□ 0.68
TUBB3-207ENST00000554927 TOM1L2Q6ZVM7 507 aa19.29■□□□□ 0.68
TUBB3-207ENST00000554927 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
TUBB3-207ENST00000554927 SRPK2P78362 688 aaKnown RBP19.28■□□□□ 0.68
TUBB3-207ENST00000554927 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
TUBB3-207ENST00000554927 STK32BQ9NY57 414 aa19.28■□□□□ 0.68
TUBB3-207ENST00000554927 TOPAZ1Q8N9V7 1692 aa19.27■□□□□ 0.68
TUBB3-207ENST00000554927 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
TUBB3-207ENST00000554927 RGPD3A6NKT7 1758 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-207ENST00000554927 RGPD4Q7Z3J3 1758 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 PTGER2P43116 358 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 NLRP6P59044 892 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 FHDC1Q9C0D6 1143 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-207ENST00000554927 PEAK1Q9H792 1746 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
TUBB3-207ENST00000554927 CASZ1Q86V15 1759 aa19.24■□□□□ 0.67
TUBB3-207ENST00000554927 PROM2Q8N271 834 aa19.24■□□□□ 0.67
TUBB3-207ENST00000554927 LRRC37A3O60309 1634 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms