RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
TMEM253-204ENST00000554844 NGDNQ8NEJ9 315 aaKnown RBP14.19□□□□□ -0.14
TMEM253-204ENST00000554844 HIRIP3Q9BW71 556 aaPredicted RBP14.19□□□□□ -0.14
TMEM253-204ENST00000554844 TRAK1Q9UPV9 953 aa14.19□□□□□ -0.14
TMEM253-204ENST00000554844 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
TMEM253-204ENST00000554844 TULP4Q9NRJ4 1543 aa14.17□□□□□ -0.14
TMEM253-204ENST00000554844 KDM2AQ9Y2K7 1162 aa14.17□□□□□ -0.14
TMEM253-204ENST00000554844 NRAPQ86VF7 1730 aa14.17□□□□□ -0.14
TMEM253-204ENST00000554844 LRP5O75197 1615 aa14.16□□□□□ -0.14
TMEM253-204ENST00000554844 TRPM3Q9HCF6 1732 aaPredicted RBP14.16□□□□□ -0.14
TMEM253-204ENST00000554844 PRDM11Q9NQV5 511 aa14.16□□□□□ -0.14
TMEM253-204ENST00000554844 RGPD1P0DJD0 1748 aa14.15□□□□□ -0.14
TMEM253-204ENST00000554844 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
TMEM253-204ENST00000554844 PSDA5PKW4 1024 aaPredicted RBP14.15□□□□□ -0.14
TMEM253-204ENST00000554844 WASLO00401 505 aaPredicted RBP14.15□□□□□ -0.14
TMEM253-204ENST00000554844 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
TMEM253-204ENST00000554844 ADGRB1O14514 1584 aa14.14□□□□□ -0.15
TMEM253-204ENST00000554844 DCAF11Q8TEB1 546 aa14.14□□□□□ -0.15
TMEM253-204ENST00000554844 STAC3Q96MF2 364 aa14.14□□□□□ -0.15
TMEM253-204ENST00000554844 SPATA31A5Q5VU36 1347 aa14.14□□□□□ -0.15
TMEM253-204ENST00000554844 SPATA31A7Q8IWB4 1347 aa14.14□□□□□ -0.15
TMEM253-204ENST00000554844 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
TMEM253-204ENST00000554844 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
TMEM253-204ENST00000554844 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
TMEM253-204ENST00000554844 PRR36Q9H6K5 1346 aa14.12□□□□□ -0.15
TMEM253-204ENST00000554844 ATP7BP35670 1465 aa14.11□□□□□ -0.15
TMEM253-204ENST00000554844 HRCP23327 699 aa14.1□□□□□ -0.15
TMEM253-204ENST00000554844 STRN4Q9NRL3 753 aa14.1□□□□□ -0.15
TMEM253-204ENST00000554844 EVA1CP58658 441 aa14.09□□□□□ -0.15
TMEM253-204ENST00000554844 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
TMEM253-204ENST00000554844 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
TMEM253-204ENST00000554844 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
TMEM253-204ENST00000554844 THSD7AQ9UPZ6 1657 aa14.08□□□□□ -0.16
TMEM253-204ENST00000554844 CRYBG1Q9Y4K1 1723 aa14.08□□□□□ -0.16
TMEM253-204ENST00000554844 R3HDM1Q15032 1099 aaKnown RBP14.08□□□□□ -0.16
TMEM253-204ENST00000554844 FAM196AQ6ZSG2 479 aa14.08□□□□□ -0.16
TMEM253-204ENST00000554844 SPATA31A1Q5TZJ5 1347 aa14.08□□□□□ -0.16
TMEM253-204ENST00000554844 DISP2A7MBM2 1401 aa14.07□□□□□ -0.16
TMEM253-204ENST00000554844 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
TMEM253-204ENST00000554844 PDE3BQ13370 1112 aa14.07□□□□□ -0.16
TMEM253-204ENST00000554844 CHRNA2Q15822 529 aa14.07□□□□□ -0.16
TMEM253-204ENST00000554844 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
TMEM253-204ENST00000554844 PHRF1Q9P1Y6 1649 aaKnown RBP14.06□□□□□ -0.16
TMEM253-204ENST00000554844 NUTM2GQ5VZR2 741 aa14.06□□□□□ -0.16
TMEM253-204ENST00000554844 USP35Q9P2H5 1018 aa14.06□□□□□ -0.16
TMEM253-204ENST00000554844 TNS1Q9HBL0 1735 aaKnown RBP14.05□□□□□ -0.16
TMEM253-204ENST00000554844 TRIM37O94972 964 aa14.05□□□□□ -0.16
TMEM253-204ENST00000554844 APBA3O96018 575 aa14.05□□□□□ -0.16
TMEM253-204ENST00000554844 CDK19Q9BWU1 502 aa14.05□□□□□ -0.16
TMEM253-204ENST00000554844 PARD3Q8TEW0 1356 aa14.05□□□□□ -0.16
TMEM253-204ENST00000554844 EZH2Q15910 746 aaKnown RBP14.04□□□□□ -0.16
TMEM253-204ENST00000554844 NBPF8Q3BBV2 869 aa14.03□□□□□ -0.16
TMEM253-204ENST00000554844 NBPF14Q5TI25 921 aa14.03□□□□□ -0.16
TMEM253-204ENST00000554844 ABTB2Q8N961 1025 aa14.03□□□□□ -0.16
TMEM253-204ENST00000554844 CCDC61Q9Y6R9 512 aa14.03□□□□□ -0.16
TMEM253-204ENST00000554844 ACEP12821 1306 aa14.03□□□□□ -0.16
TMEM253-204ENST00000554844 SSH2Q76I76 1423 aa14.02□□□□□ -0.16
TMEM253-204ENST00000554844 BARGINQ6ZT62 677 aa14.02□□□□□ -0.17
TMEM253-204ENST00000554844 POLR3AO14802 1390 aaPredicted RBP14.01□□□□□ -0.17
TMEM253-204ENST00000554844 TCP11L2Q8N4U5 519 aa14.01□□□□□ -0.17
TMEM253-204ENST00000554844 TOPAZ1Q8N9V7 1692 aa14.01□□□□□ -0.17
TMEM253-204ENST00000554844 C11orf95C9JLR9 678 aaPredicted RBP14□□□□□ -0.17
TMEM253-204ENST00000554844 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
TMEM253-204ENST00000554844 NLRP13Q86W25 1043 aa14□□□□□ -0.17
TMEM253-204ENST00000554844 CAMKK2Q96RR4 588 aa14□□□□□ -0.17
TMEM253-204ENST00000554844 NRKQ7Z2Y5 1582 aa14□□□□□ -0.17
TMEM253-204ENST00000554844 PLEKHG3A1L390 1219 aa13.99□□□□□ -0.17
TMEM253-204ENST00000554844 ZBTB7CA1YPR0 619 aa13.99□□□□□ -0.17
TMEM253-204ENST00000554844 THRAP3Q9Y2W1 955 aaKnown RBP13.99□□□□□ -0.17
TMEM253-204ENST00000554844 KIAA1210Q9ULL0 1709 aa13.98□□□□□ -0.17
TMEM253-204ENST00000554844 CPDO75976 1380 aa13.98□□□□□ -0.17
TMEM253-204ENST00000554844 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
TMEM253-204ENST00000554844 LARP1Q6PKG0 1096 aaKnown RBP13.98□□□□□ -0.17
TMEM253-204ENST00000554844 PPP1R1BQ9UD71 204 aaPredicted RBP13.98□□□□□ -0.17
TMEM253-204ENST00000554844 PPIP5K1Q6PFW1 1433 aa13.97□□□□□ -0.17
TMEM253-204ENST00000554844 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
TMEM253-204ENST00000554844 USP19O94966 1318 aa13.96□□□□□ -0.17
TMEM253-204ENST00000554844 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
TMEM253-204ENST00000554844 RREB1Q92766 1687 aa13.95□□□□□ -0.18
TMEM253-204ENST00000554844 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
TMEM253-204ENST00000554844 GCP02774 474 aa13.95□□□□□ -0.18
TMEM253-204ENST00000554844 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
TMEM253-204ENST00000554844 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
TMEM253-204ENST00000554844 FOXD4L1Q9NU39 408 aa13.94□□□□□ -0.18
TMEM253-204ENST00000554844 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
TMEM253-204ENST00000554844 OVOS2A0A0G2JMS6 1433 aa13.93□□□□□ -0.18
TMEM253-204ENST00000554844 OVOS2A0A0J9YW53 1432 aa13.93□□□□□ -0.18
TMEM253-204ENST00000554844 CRB1P82279 1406 aa13.93□□□□□ -0.18
TMEM253-204ENST00000554844 OVOS2Q6IE36 1432 aa13.93□□□□□ -0.18
TMEM253-204ENST00000554844 SPON1Q9HCB6 807 aa13.93□□□□□ -0.18
TMEM253-204ENST00000554844 CABP2Q9NPB3 220 aa13.93□□□□□ -0.18
TMEM253-204ENST00000554844 COL5A2P05997 1499 aaPredicted RBP13.93□□□□□ -0.18
TMEM253-204ENST00000554844 NLRP6P59044 892 aa13.92□□□□□ -0.18
TMEM253-204ENST00000554844 TOM1L2Q6ZVM7 507 aa13.92□□□□□ -0.18
TMEM253-204ENST00000554844 ZBTB22O15209 634 aa13.91□□□□□ -0.18
TMEM253-204ENST00000554844 YY1P25490 414 aa13.91□□□□□ -0.18
TMEM253-204ENST00000554844 DDB1Q16531 1140 aa13.91□□□□□ -0.18
TMEM253-204ENST00000554844 QRICH2Q9H0J4 1663 aa13.91□□□□□ -0.18
TMEM253-204ENST00000554844 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
TMEM253-204ENST00000554844 USP6P35125 1406 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms