RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC00639-202ENST00000554732 MTHFSP49914 203 aa16.52■□□□□ 0.24
LINC00639-202ENST00000554732 NOLC1Q14978 699 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC00639-202ENST00000554732 NOC3LQ8WTT2 800 aaKnown RBP16.52■□□□□ 0.24
LINC00639-202ENST00000554732 PDIA4P13667 645 aaKnown RBP16.52■□□□□ 0.24
LINC00639-202ENST00000554732 GTPBP4Q9BZE4 634 aaKnown RBP16.52■□□□□ 0.24
LINC00639-202ENST00000554732 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
LINC00639-202ENST00000554732 FOSBP53539 338 aa16.52■□□□□ 0.23
LINC00639-202ENST00000554732 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.23
LINC00639-202ENST00000554732 WWC1Q8IX03 1113 aa16.52■□□□□ 0.23
LINC00639-202ENST00000554732 FMNL2Q96PY5 1086 aa16.52■□□□□ 0.23
LINC00639-202ENST00000554732 POLR3GO15318 223 aaPredicted RBP16.51■□□□□ 0.23
LINC00639-202ENST00000554732 PRIMPOLQ96LW4 560 aa16.51■□□□□ 0.23
LINC00639-202ENST00000554732 CALCOCO1Q9P1Z2 691 aa16.51■□□□□ 0.23
LINC00639-202ENST00000554732 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC00639-202ENST00000554732 TIGD1Q96MW7 591 aa16.51■□□□□ 0.23
LINC00639-202ENST00000554732 ADCY5O95622 1261 aa16.5■□□□□ 0.23
LINC00639-202ENST00000554732 ZFP91Q96JP5 570 aaPredicted RBP16.5■□□□□ 0.23
LINC00639-202ENST00000554732 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
LINC00639-202ENST00000554732 ATF7IPQ6VMQ6 1270 aa16.5■□□□□ 0.23
LINC00639-202ENST00000554732 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
LINC00639-202ENST00000554732 RARSP54136 660 aaKnown RBP16.5■□□□□ 0.23
LINC00639-202ENST00000554732 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
LINC00639-202ENST00000554732 C9orf84Q5VXU9 1444 aa16.5■□□□□ 0.23
LINC00639-202ENST00000554732 CCDC192P0DO97 292 aa16.49■□□□□ 0.23
LINC00639-202ENST00000554732 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
LINC00639-202ENST00000554732 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
LINC00639-202ENST00000554732 HSP90B2PQ58FF3 399 aa16.48■□□□□ 0.23
LINC00639-202ENST00000554732 GAS2L3Q86XJ1 694 aa16.48■□□□□ 0.23
LINC00639-202ENST00000554732 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
LINC00639-202ENST00000554732 TNNT1P13805 278 aa16.48■□□□□ 0.23
LINC00639-202ENST00000554732 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00639-202ENST00000554732 TMEM57Q8N5G2 664 aa16.48■□□□□ 0.23
LINC00639-202ENST00000554732 LEKR1Q6ZMV7 388 aa16.47■□□□□ 0.23
LINC00639-202ENST00000554732 DAPK1P53355 1430 aa16.47■□□□□ 0.23
LINC00639-202ENST00000554732 SUPT6HQ7KZ85 1726 aaKnown RBP16.47■□□□□ 0.23
LINC00639-202ENST00000554732 HCLS1P14317 486 aaPredicted RBP16.47■□□□□ 0.23
LINC00639-202ENST00000554732 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.23
LINC00639-202ENST00000554732 GPATCH11Q8N954 259 aa16.46■□□□□ 0.23
LINC00639-202ENST00000554732 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
LINC00639-202ENST00000554732 NOL7Q9UMY1 257 aaKnown RBP16.46■□□□□ 0.23
LINC00639-202ENST00000554732 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
LINC00639-202ENST00000554732 C17orf53Q8N3J3 647 aaPredicted RBP16.46■□□□□ 0.23
LINC00639-202ENST00000554732 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
LINC00639-202ENST00000554732 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
LINC00639-202ENST00000554732 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC00639-202ENST00000554732 V9GYY5 206 aaPredicted RBP16.46■□□□□ 0.23
LINC00639-202ENST00000554732 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
LINC00639-202ENST00000554732 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC00639-202ENST00000554732 CAMK4Q16566 473 aa16.45■□□□□ 0.22
LINC00639-202ENST00000554732 PAXIP1Q6ZW49 1069 aaPredicted RBP16.45■□□□□ 0.22
LINC00639-202ENST00000554732 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
LINC00639-202ENST00000554732 KIF20AO95235 890 aa16.45■□□□□ 0.22
LINC00639-202ENST00000554732 LRSAM1Q6UWE0 723 aa16.45■□□□□ 0.22
LINC00639-202ENST00000554732 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.45■□□□□ 0.22
LINC00639-202ENST00000554732 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
LINC00639-202ENST00000554732 A0A0G2JS52 829 aa16.45■□□□□ 0.22
LINC00639-202ENST00000554732 CEBPZQ03701 1054 aaKnown RBP16.45■□□□□ 0.22
LINC00639-202ENST00000554732 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
LINC00639-202ENST00000554732 WDR33Q9C0J8 1336 aaKnown RBP16.44■□□□□ 0.22
LINC00639-202ENST00000554732 TRMT1Q9NXH9 659 aaKnown RBP16.44■□□□□ 0.22
LINC00639-202ENST00000554732 H0YHG0 523 aa16.44■□□□□ 0.22
LINC00639-202ENST00000554732 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00639-202ENST00000554732 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
LINC00639-202ENST00000554732 AK7Q96M32 723 aa16.43■□□□□ 0.22
LINC00639-202ENST00000554732 KDM2BQ8NHM5 1336 aa16.43■□□□□ 0.22
LINC00639-202ENST00000554732 SMC2O95347 1197 aa16.43■□□□□ 0.22
LINC00639-202ENST00000554732 ZKSCAN1P17029 563 aaPredicted RBP16.43■□□□□ 0.22
LINC00639-202ENST00000554732 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
LINC00639-202ENST00000554732 SDF4Q9BRK5 362 aa16.43■□□□□ 0.22
LINC00639-202ENST00000554732 MCM2P49736 904 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 TNMDQ9H2S6 317 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 DEF6Q9H4E7 631 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 EID1Q9Y6B2 187 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 TRIM34Q9BYJ4 488 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
LINC00639-202ENST00000554732 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 ERC2O15083 957 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 HMOX1P09601 288 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 IRX3P78415 501 aaPredicted RBP16.42■□□□□ 0.22
LINC00639-202ENST00000554732 TBC1D9Q6ZT07 1266 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 PTPN14Q15678 1187 aa16.42■□□□□ 0.22
LINC00639-202ENST00000554732 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 CCDC73Q6ZRK6 1079 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
LINC00639-202ENST00000554732 HS1BP3Q53T59 392 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
LINC00639-202ENST00000554732 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
LINC00639-202ENST00000554732 FSD2A1L4K1 749 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 TTLL5Q6EMB2 1281 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 UBXN4Q92575 508 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 KIAA1107Q9UPP5 1409 aa16.41■□□□□ 0.22
LINC00639-202ENST00000554732 PDILTQ8N807 584 aa16.4■□□□□ 0.22
LINC00639-202ENST00000554732 KRT222Q8N1A0 295 aa16.4■□□□□ 0.22
LINC00639-202ENST00000554732 IPO4Q8TEX9 1081 aaKnown RBP16.4■□□□□ 0.22
LINC00639-202ENST00000554732 CCDC9Q9Y3X0 531 aaKnown RBP16.4■□□□□ 0.22
LINC00639-202ENST00000554732 PES1O00541 588 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms