RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 UPF1Q92900 1129 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATXN3-230ENST00000554673 GPHNQ9NQX3 736 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-230ENST00000554673 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
ATXN3-230ENST00000554673 TRPM2O94759 1503 aa8.62□□□□□ -1.03
ATXN3-230ENST00000554673 AGLP35573 1532 aa8.62□□□□□ -1.03
ATXN3-230ENST00000554673 PREX1Q8TCU6 1659 aa8.62□□□□□ -1.03
ATXN3-230ENST00000554673 TSPY4P0CV99 314 aa8.61□□□□□ -1.03
ATXN3-230ENST00000554673 TSPY10P0CW01 314 aa8.61□□□□□ -1.03
ATXN3-230ENST00000554673 ZNF454Q8N9F8 522 aa8.61□□□□□ -1.03
ATXN3-230ENST00000554673 TRIM52Q96A61 297 aa8.61□□□□□ -1.03
ATXN3-230ENST00000554673 NPATQ14207 1427 aa8.61□□□□□ -1.03
ATXN3-230ENST00000554673 SPATA31E1Q6ZUB1 1445 aa8.61□□□□□ -1.03
ATXN3-230ENST00000554673 ZC3H13Q5T200 1668 aaKnown RBP8.6□□□□□ -1.03
ATXN3-230ENST00000554673 GOLGA8CPA6NN73 597 aa8.6□□□□□ -1.03
ATXN3-230ENST00000554673 TRPM1Q7Z4N2 1603 aa8.6□□□□□ -1.03
ATXN3-230ENST00000554673 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
ATXN3-230ENST00000554673 PPLO60437 1756 aa8.59□□□□□ -1.03
ATXN3-230ENST00000554673 NEUROD1Q13562 356 aa8.59□□□□□ -1.03
ATXN3-230ENST00000554673 IRX2Q9BZI1 471 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-230ENST00000554673 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-230ENST00000554673 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
ATXN3-230ENST00000554673 NOS1P29475 1434 aa8.57□□□□□ -1.04
ATXN3-230ENST00000554673 KIF3BO15066 747 aa8.57□□□□□ -1.04
ATXN3-230ENST00000554673 ADGRB3O60242 1522 aa8.57□□□□□ -1.04
ATXN3-230ENST00000554673 ZEB1P37275 1124 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-230ENST00000554673 KIF1BO60333 1816 aa8.56□□□□□ -1.04
ATXN3-230ENST00000554673 C3P01024 1663 aa8.56□□□□□ -1.04
ATXN3-230ENST00000554673 SETD1AO15047 1707 aaKnown RBP8.55□□□□□ -1.04
ATXN3-230ENST00000554673 THSD4Q6ZMP0 1018 aa8.55□□□□□ -1.04
ATXN3-230ENST00000554673 WNT2BQ93097 391 aa8.55□□□□□ -1.04
ATXN3-230ENST00000554673 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
ATXN3-230ENST00000554673 TMEM131LA2VDJ0 1609 aa8.54□□□□□ -1.04
ATXN3-230ENST00000554673 POLR1AO95602 1720 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-230ENST00000554673 NEURL4Q96JN8 1562 aa8.54□□□□□ -1.04
ATXN3-230ENST00000554673 BRPF1P55201 1214 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-230ENST00000554673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-230ENST00000554673 ASXL1Q8IXJ9 1541 aa8.54□□□□□ -1.04
ATXN3-230ENST00000554673 FER1L4A9Z1Z3 1794 aa8.53□□□□□ -1.04
ATXN3-230ENST00000554673 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
ATXN3-230ENST00000554673 ADAMTSL3P82987 1691 aa8.53□□□□□ -1.04
ATXN3-230ENST00000554673 SPATA31D1Q6ZQQ2 1576 aa8.53□□□□□ -1.04
ATXN3-230ENST00000554673 PTPREP23469 700 aa8.53□□□□□ -1.04
ATXN3-230ENST00000554673 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
ATXN3-230ENST00000554673 OXER1Q8TDS5 423 aa8.53□□□□□ -1.04
ATXN3-230ENST00000554673 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
ATXN3-230ENST00000554673 ERVK-7P63135 1459 aa8.52□□□□□ -1.05
ATXN3-230ENST00000554673 A0A0G2JS52 829 aa8.52□□□□□ -1.05
ATXN3-230ENST00000554673 LMOD2Q6P5Q4 547 aa8.52□□□□□ -1.05
ATXN3-230ENST00000554673 NEXMIFQ5QGS0 1516 aa8.52□□□□□ -1.05
ATXN3-230ENST00000554673 ARHGAP31Q2M1Z3 1444 aa8.52□□□□□ -1.05
ATXN3-230ENST00000554673 NRXN1Q9ULB1 1477 aa8.51□□□□□ -1.05
ATXN3-230ENST00000554673 NRXN3Q9Y4C0 1643 aa8.51□□□□□ -1.05
ATXN3-230ENST00000554673 C11orf95C9JLR9 678 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-230ENST00000554673 RGS20O76081 388 aa8.51□□□□□ -1.05
ATXN3-230ENST00000554673 RALGAPBQ86X10 1494 aa8.51□□□□□ -1.05
ATXN3-230ENST00000554673 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-230ENST00000554673 PRAG1Q86YV5 1406 aa8.5□□□□□ -1.05
ATXN3-230ENST00000554673 HIRIP3Q9BW71 556 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-230ENST00000554673 LAMC1P11047 1609 aa8.5□□□□□ -1.05
ATXN3-230ENST00000554673 UBR1Q8IWV7 1749 aa8.49□□□□□ -1.05
ATXN3-230ENST00000554673 BHMG1C9JSJ3 638 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-230ENST00000554673 FOSBP53539 338 aa8.49□□□□□ -1.05
ATXN3-230ENST00000554673 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
ATXN3-230ENST00000554673 ZBED2Q9BTP6 218 aa8.49□□□□□ -1.05
ATXN3-230ENST00000554673 SLC4A5Q9BY07 1137 aa8.49□□□□□ -1.05
ATXN3-230ENST00000554673 RIMS1Q86UR5 1692 aaKnown RBP8.49□□□□□ -1.05
ATXN3-230ENST00000554673 KIAA1210Q9ULL0 1709 aa8.49□□□□□ -1.05
ATXN3-230ENST00000554673 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
ATXN3-230ENST00000554673 GGT6Q6P531 493 aa8.48□□□□□ -1.05
ATXN3-230ENST00000554673 ADGRB1O14514 1584 aa8.48□□□□□ -1.05
ATXN3-230ENST00000554673 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
ATXN3-230ENST00000554673 PTPRMP28827 1452 aa8.47□□□□□ -1.05
ATXN3-230ENST00000554673 RYDENQ9NUL5 291 aaKnown RBP8.47□□□□□ -1.05
ATXN3-230ENST00000554673 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.05
ATXN3-230ENST00000554673 CNTLNQ9NXG0 1405 aa8.46□□□□□ -1.05
ATXN3-230ENST00000554673 NBPF1Q3BBV0 1214 aa8.46□□□□□ -1.06
ATXN3-230ENST00000554673 KCNV2Q8TDN2 545 aa8.46□□□□□ -1.06
ATXN3-230ENST00000554673 NBPF3Q9H094 633 aa8.46□□□□□ -1.06
ATXN3-230ENST00000554673 MYOM2P54296 1465 aa8.45□□□□□ -1.06
ATXN3-230ENST00000554673 ADAM33Q9BZ11 813 aa8.45□□□□□ -1.06
ATXN3-230ENST00000554673 MYOM1P52179 1685 aa8.45□□□□□ -1.06
ATXN3-230ENST00000554673 ARHGEF28Q8N1W1 1705 aaKnown RBP8.45□□□□□ -1.06
ATXN3-230ENST00000554673 GPRASP1Q5JY77 1395 aa8.45□□□□□ -1.06
ATXN3-230ENST00000554673 EVI5O60447 810 aa8.44□□□□□ -1.06
ATXN3-230ENST00000554673 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
ATXN3-230ENST00000554673 ADGRF5Q8IZF2 1346 aa8.44□□□□□ -1.06
ATXN3-230ENST00000554673 A2ML1A8K2U0 1454 aa8.44□□□□□ -1.06
ATXN3-230ENST00000554673 MYO3AQ8NEV4 1616 aa8.43□□□□□ -1.06
ATXN3-230ENST00000554673 CRISPLD2Q9H0B8 497 aa8.43□□□□□ -1.06
ATXN3-230ENST00000554673 ZFYVE9O95405 1425 aa8.43□□□□□ -1.06
ATXN3-230ENST00000554673 KDM5AP29375 1690 aaKnown RBP8.43□□□□□ -1.06
ATXN3-230ENST00000554673 HSPA5P11021 654 aaKnown RBP8.42□□□□□ -1.06
ATXN3-230ENST00000554673 IDI1Q13907 227 aa8.42□□□□□ -1.06
ATXN3-230ENST00000554673 MLECQ14165 292 aa8.42□□□□□ -1.06
ATXN3-230ENST00000554673 RGL3Q3MIN7 710 aa8.42□□□□□ -1.06
ATXN3-230ENST00000554673 Q6ZNB5 142 aa8.42□□□□□ -1.06
ATXN3-230ENST00000554673 PIK3C2GO75747 1445 aa8.42□□□□□ -1.06
ATXN3-230ENST00000554673 ZMYM3Q14202 1370 aa8.41□□□□□ -1.06
ATXN3-230ENST00000554673 KANK1Q14678 1352 aa8.41□□□□□ -1.06
ATXN3-230ENST00000554673 WASHC2CQ9Y4E1 1318 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms