RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 UNC13BO14795 1591 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 TOM1O60784 492 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 ITGBL1O95965 494 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-206ENST00000554429 ANKLE2Q86XL3 938 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 VPS8Q8N3P4 1428 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 SHPRHQ149N8 1683 aa4.01□□□□□ -1.77
PRPF39-206ENST00000554429 LAMC1P11047 1609 aa4□□□□□ -1.77
PRPF39-206ENST00000554429 NOS1P29475 1434 aa4□□□□□ -1.77
PRPF39-206ENST00000554429 DPY19L2Q6NUT2 758 aa4□□□□□ -1.77
PRPF39-206ENST00000554429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4□□□□□ -1.77
PRPF39-206ENST00000554429 GFRA3O60609 400 aa4□□□□□ -1.77
PRPF39-206ENST00000554429 AHDC1Q5TGY3 1603 aaPredicted RBP3.99□□□□□ -1.77
PRPF39-206ENST00000554429 IQGAP3Q86VI3 1631 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 UBAP1LF5GYI3 381 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 PDAP1Q13442 181 aaKnown RBP3.99□□□□□ -1.77
PRPF39-206ENST00000554429 GSE1Q14687 1217 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 PAXIP1Q6ZW49 1069 aaPredicted RBP3.99□□□□□ -1.77
PRPF39-206ENST00000554429 NBR1Q14596 966 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 ROBO1Q9Y6N7 1651 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 TMEM131LA2VDJ0 1609 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 ZNF644Q9H582 1327 aaPredicted RBP3.99□□□□□ -1.77
PRPF39-206ENST00000554429 PYGBP11216 843 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 HSP90B1P14625 803 aaKnown RBP3.99□□□□□ -1.77
PRPF39-206ENST00000554429 IRX6P78412 446 aaPredicted RBP3.99□□□□□ -1.77
PRPF39-206ENST00000554429 TSHZ2Q9NRE2 1034 aa3.99□□□□□ -1.77
PRPF39-206ENST00000554429 CCDC9Q9Y3X0 531 aaKnown RBP3.99□□□□□ -1.77
PRPF39-206ENST00000554429 SETD1AO15047 1707 aaKnown RBP3.98□□□□□ -1.77
PRPF39-206ENST00000554429 LCE2BO14633 110 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 POTEEQ6S8J3 1075 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 CCDC136Q96JN2 1154 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 ATP1B4Q9UN42 357 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-206ENST00000554429 COL16A1Q07092 1604 aaPredicted RBP3.98□□□□□ -1.77
PRPF39-206ENST00000554429 ABCC5O15440 1437 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 ZFYVE9O95405 1425 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 MYO5BQ9ULV0 1848 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 TMEM2Q9UHN6 1383 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 HSPA1LP34931 641 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 SLC4A5Q9BY07 1137 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 PRAG1Q86YV5 1406 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 WASHC2CQ9Y4E1 1318 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 PHLPP1O60346 1717 aa3.98□□□□□ -1.77
PRPF39-206ENST00000554429 GGT6Q6P531 493 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 DAPK1P53355 1430 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 FGD6Q6ZV73 1430 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 XRN1Q8IZH2 1706 aaKnown RBP3.97□□□□□ -1.77
PRPF39-206ENST00000554429 CDK12Q9NYV4 1490 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-206ENST00000554429 NHSL1Q5SYE7 1610 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 PIK3R4Q99570 1358 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 KIF3BO15066 747 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 FBXO31Q5XUX0 539 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-206ENST00000554429 TREML4Q6UXN2 200 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 NECTIN2Q92692 538 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 PCGF6Q9BYE7 350 aa3.97□□□□□ -1.77
PRPF39-206ENST00000554429 ZNF777Q9ULD5 760 aaPredicted RBP3.97□□□□□ -1.77
PRPF39-206ENST00000554429 PLEKHG1Q9ULL1 1385 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 SETBP1Q9Y6X0 1596 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 DCCP43146 1447 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 TSPY4P0CV99 314 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 TSPY10P0CW01 314 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 NYAP1Q6ZVC0 841 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 E9PCH4 1651 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.96□□□□□ -1.78
PRPF39-206ENST00000554429 ZNF428Q96B54 188 aa3.96□□□□□ -1.78
PRPF39-206ENST00000554429 NRXN3Q9Y4C0 1643 aa3.95□□□□□ -1.78
PRPF39-206ENST00000554429 CFAP65Q6ZU64 1925 aaKnown RBP3.95□□□□□ -1.78
PRPF39-206ENST00000554429 KIF15Q9NS87 1388 aa3.95□□□□□ -1.78
PRPF39-206ENST00000554429 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.95□□□□□ -1.78
PRPF39-206ENST00000554429 KCNA6P17658 529 aa3.95□□□□□ -1.78
PRPF39-206ENST00000554429 INSM1Q01101 510 aaPredicted RBP3.95□□□□□ -1.78
PRPF39-206ENST00000554429 THSD4Q6ZMP0 1018 aa3.95□□□□□ -1.78
PRPF39-206ENST00000554429 TRPM2O94759 1503 aa3.95□□□□□ -1.78
PRPF39-206ENST00000554429 MICALL2Q8IY33 904 aa3.95□□□□□ -1.78
PRPF39-206ENST00000554429 KANK1Q14678 1352 aa3.95□□□□□ -1.78
PRPF39-206ENST00000554429 RGS17Q9UGC6 210 aaPredicted RBP3.94□□□□□ -1.78
PRPF39-206ENST00000554429 LHX6Q9UPM6 363 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 ROCK1Q13464 1354 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 COL22A1Q8NFW1 1626 aaPredicted RBP3.94□□□□□ -1.78
PRPF39-206ENST00000554429 A0A0U1RQG5 324 aaPredicted RBP3.94□□□□□ -1.78
PRPF39-206ENST00000554429 LTKP29376 864 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 PTPN5P54829 565 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 FGD1P98174 961 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 SLC52A1Q9NWF4 448 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 ANKRD30AQ9BXX3 1397 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 SPHKAPQ2M3C7 1700 aa3.94□□□□□ -1.78
PRPF39-206ENST00000554429 ADAMTS13Q76LX8 1427 aa3.93□□□□□ -1.78
PRPF39-206ENST00000554429 HMGB1P09429 215 aaKnown RBP3.93□□□□□ -1.78
PRPF39-206ENST00000554429 AXIN2Q9Y2T1 843 aa3.93□□□□□ -1.78
PRPF39-206ENST00000554429 MARF1Q9Y4F3 1742 aaKnown RBP3.93□□□□□ -1.78
PRPF39-206ENST00000554429 JCADQ9P266 1359 aa3.93□□□□□ -1.78
PRPF39-206ENST00000554429 SPATA31A6Q5VVP1 1343 aa3.93□□□□□ -1.78
PRPF39-206ENST00000554429 TMEM92Q6UXU6 159 aa3.93□□□□□ -1.78
PRPF39-206ENST00000554429 EID1Q9Y6B2 187 aa3.93□□□□□ -1.78
PRPF39-206ENST00000554429 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.92□□□□□ -1.78
PRPF39-206ENST00000554429 TMEM94Q12767 1356 aa3.92□□□□□ -1.78
PRPF39-206ENST00000554429 TBX22Q9Y458 520 aa3.92□□□□□ -1.78
PRPF39-206ENST00000554429 SETD5Q9C0A6 1442 aa3.92□□□□□ -1.78
PRPF39-206ENST00000554429 ZBTB7CA1YPR0 619 aa3.92□□□□□ -1.78
PRPF39-206ENST00000554429 TXNDC2Q86VQ3 553 aa3.92□□□□□ -1.78
PRPF39-206ENST00000554429 PUS7Q96PZ0 661 aaKnown RBP3.92□□□□□ -1.78
PRPF39-206ENST00000554429 RIMS2Q9UQ26 1411 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms