RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
MTHFD1-206ENST00000554353 ITGBL1O95965 494 aaPredicted RBP9.03□□□□□ -0.96
MTHFD1-206ENST00000554353 CTHP32929 405 aa9.03□□□□□ -0.96
MTHFD1-206ENST00000554353 HOMEZQ8IX15 550 aa9.03□□□□□ -0.96
MTHFD1-206ENST00000554353 PTPRNQ16849 979 aa9.02□□□□□ -0.97
MTHFD1-206ENST00000554353 MAP10Q9P2G4 905 aa9.02□□□□□ -0.97
MTHFD1-206ENST00000554353 SHROOM4Q9ULL8 1493 aa9.02□□□□□ -0.97
MTHFD1-206ENST00000554353 CC2D2AQ9P2K1 1620 aa9.02□□□□□ -0.97
MTHFD1-206ENST00000554353 DXOO77932 396 aaKnown RBP9.01□□□□□ -0.97
MTHFD1-206ENST00000554353 IRF5Q13568 498 aa9.01□□□□□ -0.97
MTHFD1-206ENST00000554353 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
MTHFD1-206ENST00000554353 POM121CA8CG34 1229 aa9□□□□□ -0.97
MTHFD1-206ENST00000554353 GPR37L1O60883 481 aa9□□□□□ -0.97
MTHFD1-206ENST00000554353 CCNYL3P0C7X3 344 aa9□□□□□ -0.97
MTHFD1-206ENST00000554353 CCDC82Q8N4S0 544 aa9□□□□□ -0.97
MTHFD1-206ENST00000554353 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
MTHFD1-206ENST00000554353 F12P00748 615 aaPredicted RBP8.99□□□□□ -0.97
MTHFD1-206ENST00000554353 MMP16P51512 607 aa8.99□□□□□ -0.97
MTHFD1-206ENST00000554353 VAC14Q08AM6 782 aa8.99□□□□□ -0.97
MTHFD1-206ENST00000554353 WASHC4Q2M389 1173 aa8.99□□□□□ -0.97
MTHFD1-206ENST00000554353 CCDC24Q8N4L8 307 aa8.99□□□□□ -0.97
MTHFD1-206ENST00000554353 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
MTHFD1-206ENST00000554353 SLC6A16Q9GZN6 736 aa8.99□□□□□ -0.97
MTHFD1-206ENST00000554353 CECR2Q9BXF3 1484 aa8.97□□□□□ -0.97
MTHFD1-206ENST00000554353 CCDC97Q96F63 343 aaPredicted RBP8.97□□□□□ -0.97
MTHFD1-206ENST00000554353 EVA1BQ9NVM1 165 aa8.97□□□□□ -0.97
MTHFD1-206ENST00000554353 FKBPLQ9UIM3 349 aa8.97□□□□□ -0.97
MTHFD1-206ENST00000554353 EIF4G1Q04637 1599 aaKnown RBP8.97□□□□□ -0.97
MTHFD1-206ENST00000554353 S1PR4O95977 384 aa8.96□□□□□ -0.98
MTHFD1-206ENST00000554353 KCNH2Q12809 1159 aa8.96□□□□□ -0.98
MTHFD1-206ENST00000554353 CALR3Q96L12 384 aaKnown RBP8.96□□□□□ -0.98
MTHFD1-206ENST00000554353 KCNC4Q03721 635 aa8.95□□□□□ -0.98
MTHFD1-206ENST00000554353 GLMNQ92990 594 aa8.95□□□□□ -0.98
MTHFD1-206ENST00000554353 LCE2BO14633 110 aa8.94□□□□□ -0.98
MTHFD1-206ENST00000554353 HDGFL1Q5TGJ6 251 aa8.94□□□□□ -0.98
MTHFD1-206ENST00000554353 SERPINA10Q9UK55 444 aa8.93□□□□□ -0.98
MTHFD1-206ENST00000554353 PTCRAQ6ISU1 281 aaPredicted RBP8.92□□□□□ -0.98
MTHFD1-206ENST00000554353 ARMC2Q8NEN0 867 aa8.92□□□□□ -0.98
MTHFD1-206ENST00000554353 UNC93B1Q9H1C4 597 aa8.91□□□□□ -0.98
MTHFD1-206ENST00000554353 FCF1Q9Y324 198 aaKnown RBP8.91□□□□□ -0.98
MTHFD1-206ENST00000554353 ZC3H4Q9UPT8 1303 aaKnown RBP8.9□□□□□ -0.98
MTHFD1-206ENST00000554353 ZBBXA8MT70 800 aa8.9□□□□□ -0.98
MTHFD1-206ENST00000554353 FBXO45P0C2W1 286 aa8.9□□□□□ -0.98
MTHFD1-206ENST00000554353 NR1H3Q13133 447 aa8.9□□□□□ -0.98
MTHFD1-206ENST00000554353 ADAMTS19Q8TE59 1207 aa8.9□□□□□ -0.98
MTHFD1-206ENST00000554353 PPEF1O14829 653 aaPredicted RBP8.89□□□□□ -0.99
MTHFD1-206ENST00000554353 EIF4G2P78344 907 aaKnown RBP eCLIP8.89□□□□□ -0.99
MTHFD1-206ENST00000554353 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
MTHFD1-206ENST00000554353 NBPF14Q5TI25 921 aa8.89□□□□□ -0.99
MTHFD1-206ENST00000554353 TRAF7Q6Q0C0 670 aa8.88□□□□□ -0.99
MTHFD1-206ENST00000554353 SOX11P35716 441 aa8.87□□□□□ -0.99
MTHFD1-206ENST00000554353 PTK2Q05397 1052 aa8.87□□□□□ -0.99
MTHFD1-206ENST00000554353 PDXDC2PQ6P474 469 aa8.87□□□□□ -0.99
MTHFD1-206ENST00000554353 GPKOWQ92917 476 aaPredicted RBP eCLIP8.87□□□□□ -0.99
MTHFD1-206ENST00000554353 ALG2Q9H553 416 aa8.87□□□□□ -0.99
MTHFD1-206ENST00000554353 GGCXP38435 758 aa8.86□□□□□ -0.99
MTHFD1-206ENST00000554353 LAPTM4AQ15012 233 aa8.86□□□□□ -0.99
MTHFD1-206ENST00000554353 LINC01559Q495D7 138 aa8.86□□□□□ -0.99
MTHFD1-206ENST00000554353 BAP1Q92560 729 aa8.86□□□□□ -0.99
MTHFD1-206ENST00000554353 RNF223E7ERA6 249 aa8.85□□□□□ -0.99
MTHFD1-206ENST00000554353 AGERQ15109 404 aa8.85□□□□□ -0.99
MTHFD1-206ENST00000554353 ARHGAP9Q9BRR9 750 aa8.85□□□□□ -0.99
MTHFD1-206ENST00000554353 GPSM3Q9Y4H4 160 aa8.85□□□□□ -0.99
MTHFD1-206ENST00000554353 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
MTHFD1-206ENST00000554353 MAGEB6P1A0A0J9YX57 407 aa8.83□□□□□ -1
MTHFD1-206ENST00000554353 ZBTB24O43167 697 aaPredicted RBP8.83□□□□□ -1
MTHFD1-206ENST00000554353 ZBTB33Q86T24 672 aa8.83□□□□□ -1
MTHFD1-206ENST00000554353 PCDHB9Q9Y5E1 797 aa8.83□□□□□ -1
MTHFD1-206ENST00000554353 RFX1P22670 979 aa8.82□□□□□ -1
MTHFD1-206ENST00000554353 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
MTHFD1-206ENST00000554353 ADAM32Q8TC27 787 aa8.82□□□□□ -1
MTHFD1-206ENST00000554353 OCSTAMPQ9BR26 566 aa8.82□□□□□ -1
MTHFD1-206ENST00000554353 SH3BP5LQ7L8J4 393 aa8.81□□□□□ -1
MTHFD1-206ENST00000554353 ANKLE1Q8NAG6 615 aa8.81□□□□□ -1
MTHFD1-206ENST00000554353 ZNF511Q8NB15 262 aa8.81□□□□□ -1
MTHFD1-206ENST00000554353 FOXJ1Q92949 421 aa8.81□□□□□ -1
MTHFD1-206ENST00000554353 PPP1R12CQ9BZL4 782 aa8.81□□□□□ -1
MTHFD1-206ENST00000554353 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.81□□□□□ -1
MTHFD1-206ENST00000554353 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
MTHFD1-206ENST00000554353 BPHLQ86WA6 291 aaPredicted RBP8.8□□□□□ -1
MTHFD1-206ENST00000554353 UCN2Q96RP3 112 aa8.8□□□□□ -1
MTHFD1-206ENST00000554353 TFIP11Q9UBB9 837 aaKnown RBP8.8□□□□□ -1
MTHFD1-206ENST00000554353 PALM3A6NDB9 673 aaPredicted RBP8.79□□□□□ -1
MTHFD1-206ENST00000554353 SH3BP2P78314 561 aa8.78□□□□□ -1
MTHFD1-206ENST00000554353 TRIM32Q13049 653 aa8.78□□□□□ -1
MTHFD1-206ENST00000554353 DZIP3Q86Y13 1208 aaKnown RBP8.78□□□□□ -1
MTHFD1-206ENST00000554353 ZNF592Q92610 1267 aa8.78□□□□□ -1
MTHFD1-206ENST00000554353 PIK3CDO00329 1044 aa8.77□□□□□ -1.01
MTHFD1-206ENST00000554353 LMOD1P29536 600 aaPredicted RBP8.77□□□□□ -1.01
MTHFD1-206ENST00000554353 CFAP70Q5T0N1 1121 aa8.77□□□□□ -1.01
MTHFD1-206ENST00000554353 TBC1D9Q6ZT07 1266 aa8.77□□□□□ -1.01
MTHFD1-206ENST00000554353 SH3RF1Q7Z6J0 888 aa8.77□□□□□ -1.01
MTHFD1-206ENST00000554353 SLFNL1Q499Z3 407 aa8.76□□□□□ -1.01
MTHFD1-206ENST00000554353 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
MTHFD1-206ENST00000554353 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
MTHFD1-206ENST00000554353 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
MTHFD1-206ENST00000554353 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
MTHFD1-206ENST00000554353 ATP9BO43861 1147 aa8.75□□□□□ -1.01
MTHFD1-206ENST00000554353 SKIP12755 728 aa8.75□□□□□ -1.01
MTHFD1-206ENST00000554353 MCCD1P59942 119 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms