RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 UHRF1BP1LA0JNW5 1464 aa10.21□□□□□ -0.78
ATXN3-226ENST00000554350 CD46P15529 392 aa10.2□□□□□ -0.78
ATXN3-226ENST00000554350 BRICD5Q6PL45 260 aa10.2□□□□□ -0.78
ATXN3-226ENST00000554350 RIMS1Q86UR5 1692 aaKnown RBP10.2□□□□□ -0.78
ATXN3-226ENST00000554350 PRDM9Q9NQV7 894 aa10.2□□□□□ -0.78
ATXN3-226ENST00000554350 SALL2Q9Y467 1007 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-226ENST00000554350 ZCCHC11Q5TAX3 1644 aaKnown RBP10.19□□□□□ -0.78
ATXN3-226ENST00000554350 RNF19BQ6ZMZ0 732 aa10.19□□□□□ -0.78
ATXN3-226ENST00000554350 BCORL1Q5H9F3 1711 aa10.19□□□□□ -0.78
ATXN3-226ENST00000554350 WDR7Q9Y4E6 1490 aa10.18□□□□□ -0.78
ATXN3-226ENST00000554350 MAGI3Q5TCQ9 1506 aa10.17□□□□□ -0.78
ATXN3-226ENST00000554350 KDM5BQ9UGL1 1544 aa10.17□□□□□ -0.78
ATXN3-226ENST00000554350 FMNL1O95466 1100 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-226ENST00000554350 PKD2L1Q9P0L9 805 aa10.17□□□□□ -0.78
ATXN3-226ENST00000554350 FCF1Q9Y324 198 aaKnown RBP10.17□□□□□ -0.78
ATXN3-226ENST00000554350 MINK1Q8N4C8 1332 aaPredicted RBP10.16□□□□□ -0.78
ATXN3-226ENST00000554350 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
ATXN3-226ENST00000554350 CCDC102AQ96A19 550 aa10.16□□□□□ -0.78
ATXN3-226ENST00000554350 BIVM-ERCC5R4GMW8 1640 aa10.15□□□□□ -0.78
ATXN3-226ENST00000554350 MDM2Q00987 491 aaPredicted RBP10.15□□□□□ -0.78
ATXN3-226ENST00000554350 MYT1Q01538 1121 aa10.15□□□□□ -0.78
ATXN3-226ENST00000554350 CFAP43Q8NDM7 1665 aa10.15□□□□□ -0.79
ATXN3-226ENST00000554350 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
ATXN3-226ENST00000554350 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.14□□□□□ -0.79
ATXN3-226ENST00000554350 RAPGEF3O95398 923 aa10.13□□□□□ -0.79
ATXN3-226ENST00000554350 RPIAP49247 311 aa10.13□□□□□ -0.79
ATXN3-226ENST00000554350 HLA-CQ95604 372 aa10.13□□□□□ -0.79
ATXN3-226ENST00000554350 DGAT1O75907 488 aa10.12□□□□□ -0.79
ATXN3-226ENST00000554350 ARAP3Q8WWN8 1544 aa10.12□□□□□ -0.79
ATXN3-226ENST00000554350 TULP1O00294 542 aaPredicted RBP10.11□□□□□ -0.79
ATXN3-226ENST00000554350 KDM4AO75164 1064 aa10.11□□□□□ -0.79
ATXN3-226ENST00000554350 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
ATXN3-226ENST00000554350 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
ATXN3-226ENST00000554350 MMP16P51512 607 aa10.09□□□□□ -0.79
ATXN3-226ENST00000554350 GRIPAP1Q4V328 841 aa10.09□□□□□ -0.79
ATXN3-226ENST00000554350 REPIN1Q9BWE0 567 aaKnown RBP10.09□□□□□ -0.79
ATXN3-226ENST00000554350 FAM217BQ9NTX9 383 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-226ENST00000554350 FAM187AA6NFU0 413 aa10.08□□□□□ -0.8
ATXN3-226ENST00000554350 FOXC1Q12948 553 aa10.08□□□□□ -0.8
ATXN3-226ENST00000554350 MLECQ14165 292 aa10.08□□□□□ -0.8
ATXN3-226ENST00000554350 ZNF787Q6DD87 383 aa10.08□□□□□ -0.8
ATXN3-226ENST00000554350 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
ATXN3-226ENST00000554350 IQGAP2Q13576 1575 aa10.07□□□□□ -0.8
ATXN3-226ENST00000554350 UBAP1LF5GYI3 381 aa10.07□□□□□ -0.8
ATXN3-226ENST00000554350 HOXA2O43364 376 aa10.07□□□□□ -0.8
ATXN3-226ENST00000554350 Q3C1V9 767 aa10.07□□□□□ -0.8
ATXN3-226ENST00000554350 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
ATXN3-226ENST00000554350 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
ATXN3-226ENST00000554350 POTECB2RU33 542 aa10.06□□□□□ -0.8
ATXN3-226ENST00000554350 GUCA2AQ02747 115 aa10.06□□□□□ -0.8
ATXN3-226ENST00000554350 POGZQ7Z3K3 1410 aa10.06□□□□□ -0.8
ATXN3-226ENST00000554350 DXOO77932 396 aaKnown RBP10.05□□□□□ -0.8
ATXN3-226ENST00000554350 USP46P62068 366 aa10.05□□□□□ -0.8
ATXN3-226ENST00000554350 USB1Q9BQ65 265 aaKnown RBP10.05□□□□□ -0.8
ATXN3-226ENST00000554350 DISP1Q96F81 1524 aa10.05□□□□□ -0.8
ATXN3-226ENST00000554350 MED1Q15648 1581 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-226ENST00000554350 IGF1RP08069 1367 aa10.04□□□□□ -0.8
ATXN3-226ENST00000554350 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
ATXN3-226ENST00000554350 CLCN1P35523 988 aa10.04□□□□□ -0.8
ATXN3-226ENST00000554350 STRCQ7RTU9 1775 aa10.03□□□□□ -0.8
ATXN3-226ENST00000554350 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
ATXN3-226ENST00000554350 ST8SIA5O15466 376 aa10.03□□□□□ -0.8
ATXN3-226ENST00000554350 AAASQ9NRG9 546 aa10.03□□□□□ -0.8
ATXN3-226ENST00000554350 FANCAO15360 1455 aa10.03□□□□□ -0.8
ATXN3-226ENST00000554350 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.8
ATXN3-226ENST00000554350 PHLDB1Q86UU1 1377 aa10.02□□□□□ -0.8
ATXN3-226ENST00000554350 IQSEC2Q5JU85 1478 aa10.02□□□□□ -0.81
ATXN3-226ENST00000554350 ZMYND10O75800 440 aa10.01□□□□□ -0.81
ATXN3-226ENST00000554350 BARGINQ6ZT62 677 aa10.01□□□□□ -0.81
ATXN3-226ENST00000554350 ARHGEF40Q8TER5 1519 aa10.01□□□□□ -0.81
ATXN3-226ENST00000554350 FER1L4A9Z1Z3 1794 aa10.01□□□□□ -0.81
ATXN3-226ENST00000554350 CARMIL1Q5VZK9 1371 aa10.01□□□□□ -0.81
ATXN3-226ENST00000554350 AVPP01185 164 aa10□□□□□ -0.81
ATXN3-226ENST00000554350 CEBPAP49715 358 aaPredicted RBP10□□□□□ -0.81
ATXN3-226ENST00000554350 TRIM32Q13049 653 aa10□□□□□ -0.81
ATXN3-226ENST00000554350 SYMPKQ92797 1274 aaKnown RBP10□□□□□ -0.81
ATXN3-226ENST00000554350 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
ATXN3-226ENST00000554350 FRMPD1Q5SYB0 1578 aa10□□□□□ -0.81
ATXN3-226ENST00000554350 LTBP4Q8N2S1 1624 aa10□□□□□ -0.81
ATXN3-226ENST00000554350 PTPRTO14522 1441 aa9.99□□□□□ -0.81
ATXN3-226ENST00000554350 UHRF1BP1Q6BDS2 1440 aa9.99□□□□□ -0.81
ATXN3-226ENST00000554350 KIF27Q86VH2 1401 aa9.99□□□□□ -0.81
ATXN3-226ENST00000554350 CRIPAKQ8N1N5 446 aa9.99□□□□□ -0.81
ATXN3-226ENST00000554350 AKNAQ7Z591 1439 aa9.99□□□□□ -0.81
ATXN3-226ENST00000554350 KIAA0556O60303 1618 aa9.98□□□□□ -0.81
ATXN3-226ENST00000554350 HSPA1LP34931 641 aa9.98□□□□□ -0.81
ATXN3-226ENST00000554350 PIP4K2BP78356 416 aa9.98□□□□□ -0.81
ATXN3-226ENST00000554350 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
ATXN3-226ENST00000554350 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
ATXN3-226ENST00000554350 TTC37Q6PGP7 1564 aa9.97□□□□□ -0.81
ATXN3-226ENST00000554350 WNT7AO00755 349 aa9.97□□□□□ -0.81
ATXN3-226ENST00000554350 ZBTB24O43167 697 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-226ENST00000554350 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
ATXN3-226ENST00000554350 NEO1Q92859 1461 aa9.97□□□□□ -0.81
ATXN3-226ENST00000554350 SSTR3P32745 418 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-226ENST00000554350 AMHR2Q16671 573 aa9.96□□□□□ -0.82
ATXN3-226ENST00000554350 CYP4X1Q8N118 509 aa9.96□□□□□ -0.82
ATXN3-226ENST00000554350 JUNDP17535 347 aa9.95□□□□□ -0.82
ATXN3-226ENST00000554350 UGGT2Q9NYU1 1516 aa9.95□□□□□ -0.82
ATXN3-226ENST00000554350 SMPD1P17405 629 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms