RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
TMEM253-203ENST00000554329 PHRF1Q9P1Y6 1649 aaKnown RBP16.48■□□□□ 0.23
TMEM253-203ENST00000554329 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
TMEM253-203ENST00000554329 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
TMEM253-203ENST00000554329 FNBP4Q8N3X1 1017 aaPredicted RBP16.47■□□□□ 0.23
TMEM253-203ENST00000554329 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
TMEM253-203ENST00000554329 ATRNO75882 1429 aa16.46■□□□□ 0.23
TMEM253-203ENST00000554329 PLEKHG3A1L390 1219 aa16.46■□□□□ 0.23
TMEM253-203ENST00000554329 FAM83GA6ND36 823 aa16.45■□□□□ 0.22
TMEM253-203ENST00000554329 CHRNA2Q15822 529 aa16.45■□□□□ 0.22
TMEM253-203ENST00000554329 SLIT2O94813 1529 aa16.45■□□□□ 0.22
TMEM253-203ENST00000554329 GLI3P10071 1580 aa16.44■□□□□ 0.22
TMEM253-203ENST00000554329 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
TMEM253-203ENST00000554329 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
TMEM253-203ENST00000554329 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
TMEM253-203ENST00000554329 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
TMEM253-203ENST00000554329 NRAPQ86VF7 1730 aa16.43■□□□□ 0.22
TMEM253-203ENST00000554329 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
TMEM253-203ENST00000554329 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
TMEM253-203ENST00000554329 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
TMEM253-203ENST00000554329 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
TMEM253-203ENST00000554329 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
TMEM253-203ENST00000554329 PIK3C2AO00443 1686 aa16.42■□□□□ 0.22
TMEM253-203ENST00000554329 USP6P35125 1406 aa16.42■□□□□ 0.22
TMEM253-203ENST00000554329 NRKQ7Z2Y5 1582 aa16.42■□□□□ 0.22
TMEM253-203ENST00000554329 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
TMEM253-203ENST00000554329 SOX12O15370 315 aa16.41■□□□□ 0.22
TMEM253-203ENST00000554329 UNC5CLQ8IV45 518 aa16.41■□□□□ 0.22
TMEM253-203ENST00000554329 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
TMEM253-203ENST00000554329 BTG4Q9NY30 223 aa16.41■□□□□ 0.22
TMEM253-203ENST00000554329 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
TMEM253-203ENST00000554329 USP47Q96K76 1375 aa16.39■□□□□ 0.21
TMEM253-203ENST00000554329 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.21
TMEM253-203ENST00000554329 COL14A1Q05707 1796 aaKnown RBP16.39■□□□□ 0.21
TMEM253-203ENST00000554329 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
TMEM253-203ENST00000554329 PRDM11Q9NQV5 511 aa16.39■□□□□ 0.21
TMEM253-203ENST00000554329 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
TMEM253-203ENST00000554329 TESK2Q96S53 571 aa16.38■□□□□ 0.21
TMEM253-203ENST00000554329 SLC12A5Q9H2X9 1139 aa16.38■□□□□ 0.21
TMEM253-203ENST00000554329 CD163L1Q9NR16 1453 aa16.37■□□□□ 0.21
TMEM253-203ENST00000554329 MON2Q7Z3U7 1717 aa16.37■□□□□ 0.21
TMEM253-203ENST00000554329 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.37■□□□□ 0.21
TMEM253-203ENST00000554329 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
TMEM253-203ENST00000554329 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
TMEM253-203ENST00000554329 EP400Q96L91 3159 aa16.36■□□□□ 0.21
TMEM253-203ENST00000554329 NLRP6P59044 892 aa16.36■□□□□ 0.21
TMEM253-203ENST00000554329 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
TMEM253-203ENST00000554329 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
TMEM253-203ENST00000554329 SBNO2Q9Y2G9 1366 aa16.36■□□□□ 0.21
TMEM253-203ENST00000554329 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
TMEM253-203ENST00000554329 UPF1Q92900 1129 aaKnown RBP eCLIP16.35■□□□□ 0.21
TMEM253-203ENST00000554329 TTC21BQ7Z4L5 1316 aa16.35■□□□□ 0.21
TMEM253-203ENST00000554329 A0A0G2JS52 829 aa16.34■□□□□ 0.21
TMEM253-203ENST00000554329 MYT1Q01538 1121 aa16.34■□□□□ 0.21
TMEM253-203ENST00000554329 USP19O94966 1318 aa16.34■□□□□ 0.21
TMEM253-203ENST00000554329 CPSF1Q10570 1443 aaKnown RBP16.34■□□□□ 0.21
TMEM253-203ENST00000554329 VPS72Q15906 364 aa16.33■□□□□ 0.2
TMEM253-203ENST00000554329 FAM98CQ17RN3 349 aaKnown RBP16.33■□□□□ 0.2
TMEM253-203ENST00000554329 NME9Q86XW9 330 aa16.33■□□□□ 0.2
TMEM253-203ENST00000554329 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
TMEM253-203ENST00000554329 A0A1W2PP64 1363 aa16.32■□□□□ 0.2
TMEM253-203ENST00000554329 GCP02774 474 aa16.32■□□□□ 0.2
TMEM253-203ENST00000554329 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
TMEM253-203ENST00000554329 CAMTA1Q9Y6Y1 1673 aa16.32■□□□□ 0.2
TMEM253-203ENST00000554329 RGPD5Q99666 1765 aa16.31■□□□□ 0.2
TMEM253-203ENST00000554329 SLIT3O75094 1523 aa16.31■□□□□ 0.2
TMEM253-203ENST00000554329 CLSPNQ9HAW4 1339 aa16.31■□□□□ 0.2
TMEM253-203ENST00000554329 FAM182BQ5T319 152 aa16.31■□□□□ 0.2
TMEM253-203ENST00000554329 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
TMEM253-203ENST00000554329 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
TMEM253-203ENST00000554329 MSH5O43196 834 aa16.3■□□□□ 0.2
TMEM253-203ENST00000554329 POLR3GLQ9BT43 218 aa16.3■□□□□ 0.2
TMEM253-203ENST00000554329 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
TMEM253-203ENST00000554329 HDGFL2Q7Z4V5 671 aaPredicted RBP16.27■□□□□ 0.2
TMEM253-203ENST00000554329 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
TMEM253-203ENST00000554329 MYOM1P52179 1685 aa16.27■□□□□ 0.19
TMEM253-203ENST00000554329 COL18A1P39060 1754 aa16.26■□□□□ 0.19
TMEM253-203ENST00000554329 SPATA31A5Q5VU36 1347 aa16.26■□□□□ 0.19
TMEM253-203ENST00000554329 SPATA31A7Q8IWB4 1347 aa16.26■□□□□ 0.19
TMEM253-203ENST00000554329 FBLN1P23142 703 aa16.26■□□□□ 0.19
TMEM253-203ENST00000554329 EVA1CP58658 441 aa16.26■□□□□ 0.19
TMEM253-203ENST00000554329 AXIN2Q9Y2T1 843 aa16.26■□□□□ 0.19
TMEM253-203ENST00000554329 NFAT5O94916 1531 aa16.25■□□□□ 0.19
TMEM253-203ENST00000554329 TMF1P82094 1093 aa16.25■□□□□ 0.19
TMEM253-203ENST00000554329 CPDO75976 1380 aa16.25■□□□□ 0.19
TMEM253-203ENST00000554329 TTC21AQ8NDW8 1320 aa16.24■□□□□ 0.19
TMEM253-203ENST00000554329 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
TMEM253-203ENST00000554329 HSPA5P11021 654 aaKnown RBP16.24■□□□□ 0.19
TMEM253-203ENST00000554329 PIAS4Q8N2W9 510 aaPredicted RBP16.24■□□□□ 0.19
TMEM253-203ENST00000554329 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
TMEM253-203ENST00000554329 BRD4O60885 1362 aaPredicted RBP16.24■□□□□ 0.19
TMEM253-203ENST00000554329 LTN1O94822 1766 aa16.23■□□□□ 0.19
TMEM253-203ENST00000554329 SPATA31A1Q5TZJ5 1347 aa16.23■□□□□ 0.19
TMEM253-203ENST00000554329 EDC4Q6P2E9 1401 aaKnown RBP16.23■□□□□ 0.19
TMEM253-203ENST00000554329 THSD7AQ9UPZ6 1657 aa16.23■□□□□ 0.19
TMEM253-203ENST00000554329 TERF2IPQ9NYB0 399 aa16.22■□□□□ 0.19
TMEM253-203ENST00000554329 KRT27Q7Z3Y8 459 aa16.21■□□□□ 0.19
TMEM253-203ENST00000554329 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
TMEM253-203ENST00000554329 USP54Q70EL1 1684 aa16.2■□□□□ 0.18
TMEM253-203ENST00000554329 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms