RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	SPDYE5	A6NIY4	337 aa		10.9	□□□□□ -0.66
ATXN3-223	ENST00000553686	SOCS7	O14512	581 aa		10.9	□□□□□ -0.66
ATXN3-223	ENST00000553686	IL27	Q8NEV9	243 aa		10.9	□□□□□ -0.66
ATXN3-223	ENST00000553686	WDR97	A6NE52	1622 aa		10.9	□□□□□ -0.66
ATXN3-223	ENST00000553686	DXO	O77932	396 aa	Known RBP	10.89	□□□□□ -0.67
ATXN3-223	ENST00000553686	HRC	P23327	699 aa		10.89	□□□□□ -0.67
ATXN3-223	ENST00000553686	PLA2G2C	Q5R387	149 aa		10.89	□□□□□ -0.67
ATXN3-223	ENST00000553686	LIAT1	Q6ZQX7	453 aa		10.89	□□□□□ -0.67
ATXN3-223	ENST00000553686	EMID1	Q96A84	441 aa	Predicted RBP	10.89	□□□□□ -0.67
ATXN3-223	ENST00000553686	JUND	P17535	347 aa		10.88	□□□□□ -0.67
ATXN3-223	ENST00000553686	SKIV2L	Q15477	1246 aa	Known RBP	10.88	□□□□□ -0.67
ATXN3-223	ENST00000553686	PRR7	Q8TB68	274 aa		10.88	□□□□□ -0.67
ATXN3-223	ENST00000553686	CABLES1	Q8TDN4	633 aa		10.88	□□□□□ -0.67
ATXN3-223	ENST00000553686	ZBTB3	Q9H5J0	574 aa		10.88	□□□□□ -0.67
ATXN3-223	ENST00000553686	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.88	□□□□□ -0.67
ATXN3-223	ENST00000553686	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.87	□□□□□ -0.67
ATXN3-223	ENST00000553686	NUTM2E	B1AL46	878 aa	Predicted RBP	10.87	□□□□□ -0.67
ATXN3-223	ENST00000553686	CLK2	P49760	499 aa	Known RBP	10.87	□□□□□ -0.67
ATXN3-223	ENST00000553686	TUSC1	Q2TAM9	212 aa		10.87	□□□□□ -0.67
ATXN3-223	ENST00000553686	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.87	□□□□□ -0.67
ATXN3-223	ENST00000553686	PRPF38B	Q5VTL8	546 aa	Known RBP	10.87	□□□□□ -0.67
ATXN3-223	ENST00000553686	NUTM2A	Q8IVF1	878 aa	Predicted RBP	10.87	□□□□□ -0.67
ATXN3-223	ENST00000553686	QPCT	Q16769	361 aa		10.86	□□□□□ -0.67
ATXN3-223	ENST00000553686	CCDC24	Q8N4L8	307 aa		10.86	□□□□□ -0.67
ATXN3-223	ENST00000553686	SH3D19	Q5HYK7	790 aa		10.85	□□□□□ -0.67
ATXN3-223	ENST00000553686	KDM6B	O15054	1643 aa		10.84	□□□□□ -0.67
ATXN3-223	ENST00000553686	LILRB3	O75022	631 aa		10.84	□□□□□ -0.67
ATXN3-223	ENST00000553686	SPRYD7	Q5W111	196 aa		10.84	□□□□□ -0.67
ATXN3-223	ENST00000553686	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.84	□□□□□ -0.67
ATXN3-223	ENST00000553686	ADGRL1	O94910	1474 aa		10.84	□□□□□ -0.67
ATXN3-223	ENST00000553686	FGD5	Q6ZNL6	1462 aa		10.84	□□□□□ -0.67
ATXN3-223	ENST00000553686	HECW2	Q9P2P5	1572 aa		10.83	□□□□□ -0.68
ATXN3-223	ENST00000553686	ZBTB24	O43167	697 aa	Predicted RBP	10.83	□□□□□ -0.68
ATXN3-223	ENST00000553686	CFAP99	D6REC4	459 aa		10.82	□□□□□ -0.68
ATXN3-223	ENST00000553686	CD2BP2	O95400	341 aa	Known RBP	10.82	□□□□□ -0.68
ATXN3-223	ENST00000553686	RPIA	P49247	311 aa		10.82	□□□□□ -0.68
ATXN3-223	ENST00000553686	RTL5	Q5HYW3	569 aa	Predicted RBP	10.82	□□□□□ -0.68
ATXN3-223	ENST00000553686	PRDM2	Q13029	1718 aa		10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	DESI1	Q6ICB0	168 aa		10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	ZNF598	Q86UK7	904 aa	Known RBP	10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	NUDT12	Q9BQG2	462 aa		10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	IRX2	Q9BZI1	471 aa	Predicted RBP	10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	NUP160	Q12769	1436 aa		10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	PRG4	Q92954	1404 aa	Predicted RBP	10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	CEP170	Q5SW79	1584 aa		10.81	□□□□□ -0.68
ATXN3-223	ENST00000553686	GRIN2A	Q12879	1464 aa		10.8	□□□□□ -0.68
ATXN3-223	ENST00000553686	TSC1	Q92574	1164 aa		10.79	□□□□□ -0.68
ATXN3-223	ENST00000553686	PTPRN	Q16849	979 aa		10.78	□□□□□ -0.68
ATXN3-223	ENST00000553686	ZNF697	Q5TEC3	545 aa		10.78	□□□□□ -0.68
ATXN3-223	ENST00000553686	LYPD8	Q6UX82	237 aa		10.78	□□□□□ -0.68
ATXN3-223	ENST00000553686	MAPKBP1	O60336	1514 aa		10.78	□□□□□ -0.68
ATXN3-223	ENST00000553686	KIF13A	Q9H1H9	1805 aa		10.77	□□□□□ -0.68
ATXN3-223	ENST00000553686	CCNYL3	P0C7X3	344 aa		10.77	□□□□□ -0.69
ATXN3-223	ENST00000553686	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.77	□□□□□ -0.69
ATXN3-223	ENST00000553686	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.77	□□□□□ -0.69
ATXN3-223	ENST00000553686	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
ATXN3-223	ENST00000553686	GOPC	Q9HD26	462 aa		10.77	□□□□□ -0.69
ATXN3-223	ENST00000553686	EVA1B	Q9NVM1	165 aa		10.77	□□□□□ -0.69
ATXN3-223	ENST00000553686	GFRA3	O60609	400 aa		10.76	□□□□□ -0.69
ATXN3-223	ENST00000553686	ILDR2	Q71H61	639 aa		10.76	□□□□□ -0.69
ATXN3-223	ENST00000553686	DISP3	Q9P2K9	1392 aa		10.76	□□□□□ -0.69
ATXN3-223	ENST00000553686	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.75	□□□□□ -0.69
ATXN3-223	ENST00000553686	PDZRN3	Q9UPQ7	1066 aa		10.75	□□□□□ -0.69
ATXN3-223	ENST00000553686	KCNH2	Q12809	1159 aa		10.74	□□□□□ -0.69
ATXN3-223	ENST00000553686	TRIM32	Q13049	653 aa		10.74	□□□□□ -0.69
ATXN3-223	ENST00000553686	DIP2B	Q9P265	1576 aa		10.73	□□□□□ -0.69
ATXN3-223	ENST00000553686	PER1	O15534	1290 aa	Predicted RBP	10.73	□□□□□ -0.69
ATXN3-223	ENST00000553686	FOXC1	Q12948	553 aa		10.73	□□□□□ -0.69
ATXN3-223	ENST00000553686	PPP2R2D	Q66LE6	453 aa		10.73	□□□□□ -0.69
ATXN3-223	ENST00000553686	HELB	Q8NG08	1087 aa	Predicted RBP	10.73	□□□□□ -0.69
ATXN3-223	ENST00000553686	FHAD1	B1AJZ9	1412 aa		10.73	□□□□□ -0.69
ATXN3-223	ENST00000553686	CTH	P32929	405 aa		10.72	□□□□□ -0.69
ATXN3-223	ENST00000553686	TRIM67	Q6ZTA4	783 aa		10.72	□□□□□ -0.69
ATXN3-223	ENST00000553686	CTDSPL2	Q05D32	466 aa		10.71	□□□□□ -0.69
ATXN3-223	ENST00000553686	LAPTM4A	Q15012	233 aa		10.71	□□□□□ -0.69
ATXN3-223	ENST00000553686	ABCA10	Q8WWZ4	1543 aa		10.7	□□□□□ -0.7
ATXN3-223	ENST00000553686	GDF9	O60383	454 aa		10.7	□□□□□ -0.7
ATXN3-223	ENST00000553686	PKD2L1	Q9P0L9	805 aa		10.7	□□□□□ -0.7
ATXN3-223	ENST00000553686	TNFRSF10A	O00220	468 aa		10.69	□□□□□ -0.7
ATXN3-223	ENST00000553686	UNC93B1	Q9H1C4	597 aa		10.69	□□□□□ -0.7
ATXN3-223	ENST00000553686	CUX1	P39880	1505 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	NRG2	O14511	850 aa	Predicted RBP	10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	AP1G2	O75843	785 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	PRR20E	P86478	221 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	PRR20C	P86479	221 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	PRR20D	P86480	221 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	PRR20B	P86481	221 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	PRR20A	P86496	221 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	SHROOM2	Q13796	1616 aa		10.68	□□□□□ -0.7
ATXN3-223	ENST00000553686	SKOR1	P84550	965 aa		10.67	□□□□□ -0.7
ATXN3-223	ENST00000553686	BAP1	Q92560	729 aa		10.67	□□□□□ -0.7
ATXN3-223	ENST00000553686	MAP10	Q9P2G4	905 aa		10.67	□□□□□ -0.7
ATXN3-223	ENST00000553686	F12	P00748	615 aa	Predicted RBP	10.66	□□□□□ -0.7
ATXN3-223	ENST00000553686	RFC5	P40937	340 aa		10.66	□□□□□ -0.7
ATXN3-223	ENST00000553686	WNT7B	P56706	349 aa		10.66	□□□□□ -0.7
ATXN3-223	ENST00000553686	WNT7A	O00755	349 aa		10.65	□□□□□ -0.7
ATXN3-223	ENST00000553686	RC3H1	Q5TC82	1133 aa	Known RBP	10.65	□□□□□ -0.7
ATXN3-223	ENST00000553686	LRRN4	Q8WUT4	740 aa		10.64	□□□□□ -0.71
ATXN3-223	ENST00000553686	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.64	□□□□□ -0.71
ATXN3-223	ENST00000553686	PLB1	Q6P1J6	1458 aa		10.63	□□□□□ -0.71

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