RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 USP17L8P0C7I0 530 aa7.38□□□□□ -1.23
VRK1-202ENST00000553683 NBPF14Q5TI25 921 aa7.38□□□□□ -1.23
VRK1-202ENST00000553683 IRX2Q9BZI1 471 aaPredicted RBP7.38□□□□□ -1.23
VRK1-202ENST00000553683 NRG2O14511 850 aaPredicted RBP7.37□□□□□ -1.23
VRK1-202ENST00000553683 PKD2L1Q9P0L9 805 aa7.37□□□□□ -1.23
VRK1-202ENST00000553683 MAP10Q9P2G4 905 aa7.37□□□□□ -1.23
VRK1-202ENST00000553683 TRIM67Q6ZTA4 783 aa7.36□□□□□ -1.23
VRK1-202ENST00000553683 MPNDQ8N594 471 aa7.36□□□□□ -1.23
VRK1-202ENST00000553683 ZNF511Q8NB15 262 aa7.36□□□□□ -1.23
VRK1-202ENST00000553683 SH3BP2P78314 561 aa7.35□□□□□ -1.23
VRK1-202ENST00000553683 SKOR1P84550 965 aa7.35□□□□□ -1.23
VRK1-202ENST00000553683 RC3H1Q5TC82 1133 aaKnown RBP7.35□□□□□ -1.23
VRK1-202ENST00000553683 LRRN4Q8WUT4 740 aa7.35□□□□□ -1.23
VRK1-202ENST00000553683 PDZRN3Q9UPQ7 1066 aa7.35□□□□□ -1.23
VRK1-202ENST00000553683 GPSM3Q9Y4H4 160 aa7.35□□□□□ -1.23
VRK1-202ENST00000553683 VARSP26640 1264 aaKnown RBP7.34□□□□□ -1.23
VRK1-202ENST00000553683 PDXDC2PQ6P474 469 aa7.34□□□□□ -1.23
VRK1-202ENST00000553683 BAP1Q92560 729 aa7.34□□□□□ -1.23
VRK1-202ENST00000553683 FKBPLQ9UIM3 349 aa7.34□□□□□ -1.23
VRK1-202ENST00000553683 GFRA3O60609 400 aa7.33□□□□□ -1.24
VRK1-202ENST00000553683 BPHLQ86WA6 291 aaPredicted RBP7.33□□□□□ -1.24
VRK1-202ENST00000553683 SNIP1Q8TAD8 396 aaKnown RBP7.33□□□□□ -1.24
VRK1-202ENST00000553683 TOR4AQ9NXH8 423 aa7.33□□□□□ -1.24
VRK1-202ENST00000553683 SH3RF1Q7Z6J0 888 aa7.32□□□□□ -1.24
VRK1-202ENST00000553683 SIAH2O43255 324 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 DGAT1O75907 488 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 NR6A1Q15406 480 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 SH3BP5LQ7L8J4 393 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 CYP4X1Q8N118 509 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 EHBP1Q8NDI1 1231 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 GJD4Q96KN9 370 aaPredicted RBP7.31□□□□□ -1.24
VRK1-202ENST00000553683 MRGPRX2Q96LB1 330 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 PRM3Q9NNZ6 103 aa7.31□□□□□ -1.24
VRK1-202ENST00000553683 FOXC1Q12948 553 aa7.3□□□□□ -1.24
VRK1-202ENST00000553683 FAM174AQ8TBP5 190 aa7.3□□□□□ -1.24
VRK1-202ENST00000553683 C1QTNF2Q9BXJ5 285 aa7.3□□□□□ -1.24
VRK1-202ENST00000553683 HMX1Q9NP08 348 aaPredicted RBP7.3□□□□□ -1.24
VRK1-202ENST00000553683 PTK2Q05397 1052 aa7.29□□□□□ -1.24
VRK1-202ENST00000553683 LINC01559Q495D7 138 aa7.29□□□□□ -1.24
VRK1-202ENST00000553683 TRMT44Q8IYL2 757 aaKnown RBP7.29□□□□□ -1.24
VRK1-202ENST00000553683 MTMR14Q8NCE2 650 aa7.29□□□□□ -1.24
VRK1-202ENST00000553683 TNFRSF10AO00220 468 aa7.28□□□□□ -1.24
VRK1-202ENST00000553683 FLIIQ13045 1269 aa7.28□□□□□ -1.24
VRK1-202ENST00000553683 ZNF592Q92610 1267 aa7.28□□□□□ -1.24
VRK1-202ENST00000553683 CDK15Q96Q40 435 aa7.28□□□□□ -1.24
VRK1-202ENST00000553683 CDV3Q9UKY7 258 aaKnown RBP7.28□□□□□ -1.24
VRK1-202ENST00000553683 NDUFB9Q9Y6M9 179 aa7.28□□□□□ -1.24
VRK1-202ENST00000553683 TTC24A2A3L6 582 aaPredicted RBP7.27□□□□□ -1.25
VRK1-202ENST00000553683 AVPP01185 164 aa7.27□□□□□ -1.25
VRK1-202ENST00000553683 FOXJ1Q92949 421 aa7.27□□□□□ -1.25
VRK1-202ENST00000553683 MAP4K5Q9Y4K4 846 aa7.27□□□□□ -1.25
VRK1-202ENST00000553683 AGERQ15109 404 aa7.26□□□□□ -1.25
VRK1-202ENST00000553683 EPS8L1Q8TE68 723 aa7.26□□□□□ -1.25
VRK1-202ENST00000553683 SNRKQ9NRH2 765 aa7.26□□□□□ -1.25
VRK1-202ENST00000553683 MCCD1P59942 119 aaPredicted RBP7.25□□□□□ -1.25
VRK1-202ENST00000553683 MCM6Q14566 821 aa7.25□□□□□ -1.25
VRK1-202ENST00000553683 CTC1Q2NKJ3 1217 aa7.25□□□□□ -1.25
VRK1-202ENST00000553683 PKDCCQ504Y2 493 aa7.25□□□□□ -1.25
VRK1-202ENST00000553683 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
VRK1-202ENST00000553683 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
VRK1-202ENST00000553683 ARHGAP9Q9BRR9 750 aa7.25□□□□□ -1.25
VRK1-202ENST00000553683 SMPD1P17405 629 aa7.24□□□□□ -1.25
VRK1-202ENST00000553683 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
VRK1-202ENST00000553683 ZBBXA8MT70 800 aa7.23□□□□□ -1.25
VRK1-202ENST00000553683 NR5A1Q13285 461 aa7.23□□□□□ -1.25
VRK1-202ENST00000553683 ERFEQ4G0M1 354 aa7.23□□□□□ -1.25
VRK1-202ENST00000553683 ZBTB33Q86T24 672 aa7.23□□□□□ -1.25
VRK1-202ENST00000553683 CCDC125Q86Z20 511 aa7.23□□□□□ -1.25
VRK1-202ENST00000553683 FAM187AA6NFU0 413 aa7.22□□□□□ -1.25
VRK1-202ENST00000553683 ADH1CP00326 375 aa7.22□□□□□ -1.25
VRK1-202ENST00000553683 ALDH1A1P00352 501 aa7.22□□□□□ -1.25
VRK1-202ENST00000553683 Q6ZNB5 142 aa7.22□□□□□ -1.25
VRK1-202ENST00000553683 OCSTAMPQ9BR26 566 aa7.22□□□□□ -1.25
VRK1-202ENST00000553683 ZNF330Q9Y3S2 320 aaPredicted RBP7.22□□□□□ -1.25
VRK1-202ENST00000553683 WASF2Q9Y6W5 498 aa7.22□□□□□ -1.25
VRK1-202ENST00000553683 MAGEB6P1A0A0J9YX57 407 aa7.21□□□□□ -1.26
VRK1-202ENST00000553683 GPR37L1O60883 481 aa7.21□□□□□ -1.26
VRK1-202ENST00000553683 NR1H3Q13133 447 aa7.21□□□□□ -1.26
VRK1-202ENST00000553683 TRAF7Q6Q0C0 670 aa7.21□□□□□ -1.26
VRK1-202ENST00000553683 TRIM52Q96A61 297 aa7.21□□□□□ -1.26
VRK1-202ENST00000553683 J3QL48 77 aa7.2□□□□□ -1.26
VRK1-202ENST00000553683 NBPF20Q3BBV1 942 aa7.2□□□□□ -1.26
VRK1-202ENST00000553683 ADAM32Q8TC27 787 aa7.2□□□□□ -1.26
VRK1-202ENST00000553683 SLC10A4Q96EP9 437 aa7.2□□□□□ -1.26
VRK1-202ENST00000553683 GRM5P41594 1212 aa7.19□□□□□ -1.26
VRK1-202ENST00000553683 MYT1Q01538 1121 aa7.19□□□□□ -1.26
VRK1-202ENST00000553683 WASHC4Q2M389 1173 aa7.19□□□□□ -1.26
VRK1-202ENST00000553683 SEPT12Q8IYM1 358 aa7.19□□□□□ -1.26
VRK1-202ENST00000553683 FBXO45P0C2W1 286 aa7.18□□□□□ -1.26
VRK1-202ENST00000553683 VASH1Q7L8A9 365 aaPredicted RBP7.18□□□□□ -1.26
VRK1-202ENST00000553683 CARD14Q9BXL6 1004 aa7.18□□□□□ -1.26
VRK1-202ENST00000553683 TLL2Q9Y6L7 1015 aa7.18□□□□□ -1.26
VRK1-202ENST00000553683 DZIP3Q86Y13 1208 aaKnown RBP7.17□□□□□ -1.26
VRK1-202ENST00000553683 WWC1Q8IX03 1113 aa7.17□□□□□ -1.26
VRK1-202ENST00000553683 TBC1D2BQ9UPU7 963 aa7.17□□□□□ -1.26
VRK1-202ENST00000553683 ESPNB1AK53 854 aa7.16□□□□□ -1.26
VRK1-202ENST00000553683 AXIN1O15169 862 aa7.16□□□□□ -1.26
VRK1-202ENST00000553683 RAD21O60216 631 aa7.16□□□□□ -1.26
VRK1-202ENST00000553683 SOX11P35716 441 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms