RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 PTPN5P54829 565 aa10.86□□□□□ -0.67
PRKCH-204ENST00000553265 COPS2P61201 443 aa10.86□□□□□ -0.67
PRKCH-204ENST00000553265 RAD21O60216 631 aa10.85□□□□□ -0.67
PRKCH-204ENST00000553265 Q3C1V9 767 aa10.85□□□□□ -0.67
PRKCH-204ENST00000553265 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
PRKCH-204ENST00000553265 LRRN4Q8WUT4 740 aa10.85□□□□□ -0.67
PRKCH-204ENST00000553265 ABCA10Q8WWZ4 1543 aa10.84□□□□□ -0.67
PRKCH-204ENST00000553265 A6NJR5 290 aa10.84□□□□□ -0.67
PRKCH-204ENST00000553265 PROSER2Q86WR7 435 aaPredicted RBP10.84□□□□□ -0.67
PRKCH-204ENST00000553265 SCUBE3Q8IX30 993 aa10.84□□□□□ -0.67
PRKCH-204ENST00000553265 GDPD2Q9HCC8 539 aa10.84□□□□□ -0.67
PRKCH-204ENST00000553265 NR1I2O75469 434 aa10.83□□□□□ -0.68
PRKCH-204ENST00000553265 TBC1D2BQ9UPU7 963 aa10.83□□□□□ -0.68
PRKCH-204ENST00000553265 ADAMTS12P58397 1594 aa10.82□□□□□ -0.68
PRKCH-204ENST00000553265 PER1O15534 1290 aaPredicted RBP10.82□□□□□ -0.68
PRKCH-204ENST00000553265 TLL1O43897 1013 aa10.82□□□□□ -0.68
PRKCH-204ENST00000553265 BRICD5Q6PL45 260 aa10.82□□□□□ -0.68
PRKCH-204ENST00000553265 GAPVD1Q14C86 1478 aa10.81□□□□□ -0.68
PRKCH-204ENST00000553265 THAP11Q96EK4 314 aa10.81□□□□□ -0.68
PRKCH-204ENST00000553265 GJD4Q96KN9 370 aaPredicted RBP10.81□□□□□ -0.68
PRKCH-204ENST00000553265 USB1Q9BQ65 265 aaKnown RBP10.81□□□□□ -0.68
PRKCH-204ENST00000553265 C1orf115Q9H7X2 142 aa10.81□□□□□ -0.68
PRKCH-204ENST00000553265 TRAK2O60296 914 aa10.8□□□□□ -0.68
PRKCH-204ENST00000553265 FMNL1O95466 1100 aaPredicted RBP10.8□□□□□ -0.68
PRKCH-204ENST00000553265 ABL2P42684 1182 aa10.8□□□□□ -0.68
PRKCH-204ENST00000553265 EPS8L1Q8TE68 723 aa10.8□□□□□ -0.68
PRKCH-204ENST00000553265 BIVM-ERCC5R4GMW8 1640 aa10.8□□□□□ -0.68
PRKCH-204ENST00000553265 ERCC6L2Q5T890 1561 aa10.79□□□□□ -0.68
PRKCH-204ENST00000553265 MYT1LQ9UL68 1186 aa10.79□□□□□ -0.68
PRKCH-204ENST00000553265 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
PRKCH-204ENST00000553265 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
PRKCH-204ENST00000553265 MTRQ99707 1265 aa10.78□□□□□ -0.68
PRKCH-204ENST00000553265 TRIM34Q9BYJ4 488 aa10.78□□□□□ -0.68
PRKCH-204ENST00000553265 PRDM9Q9NQV7 894 aa10.78□□□□□ -0.68
PRKCH-204ENST00000553265 GRIN2AQ12879 1464 aa10.77□□□□□ -0.69
PRKCH-204ENST00000553265 APBB1O00213 710 aa10.77□□□□□ -0.69
PRKCH-204ENST00000553265 FNBP4Q8N3X1 1017 aaPredicted RBP10.77□□□□□ -0.69
PRKCH-204ENST00000553265 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
PRKCH-204ENST00000553265 SOCS7O14512 581 aa10.76□□□□□ -0.69
PRKCH-204ENST00000553265 NR6A1Q15406 480 aa10.76□□□□□ -0.69
PRKCH-204ENST00000553265 CHMP7Q8WUX9 453 aaPredicted RBP10.76□□□□□ -0.69
PRKCH-204ENST00000553265 ARID3AQ99856 593 aa10.76□□□□□ -0.69
PRKCH-204ENST00000553265 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
PRKCH-204ENST00000553265 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
PRKCH-204ENST00000553265 NDUFB9Q9Y6M9 179 aa10.76□□□□□ -0.69
PRKCH-204ENST00000553265 NUP160Q12769 1436 aa10.75□□□□□ -0.69
PRKCH-204ENST00000553265 SPSB2Q99619 263 aa10.75□□□□□ -0.69
PRKCH-204ENST00000553265 GPR37L1O60883 481 aa10.74□□□□□ -0.69
PRKCH-204ENST00000553265 NYAP1Q6ZVC0 841 aa10.74□□□□□ -0.69
PRKCH-204ENST00000553265 ZPR1O75312 459 aa10.73□□□□□ -0.69
PRKCH-204ENST00000553265 JUNDP17535 347 aa10.73□□□□□ -0.69
PRKCH-204ENST00000553265 DESI1Q6ICB0 168 aa10.73□□□□□ -0.69
PRKCH-204ENST00000553265 LYPD8Q6UX82 237 aa10.73□□□□□ -0.69
PRKCH-204ENST00000553265 FAM160A2Q8N612 972 aaPredicted RBP10.73□□□□□ -0.69
PRKCH-204ENST00000553265 ZNF516Q92618 1163 aa10.73□□□□□ -0.69
PRKCH-204ENST00000553265 PRM3Q9NNZ6 103 aa10.73□□□□□ -0.69
PRKCH-204ENST00000553265 ZNF330Q9Y3S2 320 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-204ENST00000553265 MSS51Q4VC12 460 aa10.71□□□□□ -0.69
PRKCH-204ENST00000553265 TJAP1Q5JTD0 557 aa10.71□□□□□ -0.69
PRKCH-204ENST00000553265 MAP10Q9P2G4 905 aa10.71□□□□□ -0.69
PRKCH-204ENST00000553265 ERICH3Q5RHP9 1530 aa10.7□□□□□ -0.7
PRKCH-204ENST00000553265 WRNQ14191 1432 aaPredicted RBP eCLIP10.7□□□□□ -0.7
PRKCH-204ENST00000553265 POM121CA8CG34 1229 aa10.7□□□□□ -0.7
PRKCH-204ENST00000553265 ADH1BP00325 375 aa10.7□□□□□ -0.7
PRKCH-204ENST00000553265 IRF5Q13568 498 aa10.7□□□□□ -0.7
PRKCH-204ENST00000553265 RNF166Q96A37 237 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-204ENST00000553265 IL21Q9HBE4 155 aa10.69□□□□□ -0.7
PRKCH-204ENST00000553265 RUSC2Q8N2Y8 1516 aa10.68□□□□□ -0.7
PRKCH-204ENST00000553265 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
PRKCH-204ENST00000553265 DXOO77932 396 aaKnown RBP10.68□□□□□ -0.7
PRKCH-204ENST00000553265 CCDC82Q8N4S0 544 aa10.68□□□□□ -0.7
PRKCH-204ENST00000553265 NKX2-3Q8TAU0 364 aa10.68□□□□□ -0.7
PRKCH-204ENST00000553265 FHAD1B1AJZ9 1412 aa10.67□□□□□ -0.7
PRKCH-204ENST00000553265 F12P00748 615 aaPredicted RBP10.67□□□□□ -0.7
PRKCH-204ENST00000553265 CTHP32929 405 aa10.67□□□□□ -0.7
PRKCH-204ENST00000553265 PTPRNQ16849 979 aa10.67□□□□□ -0.7
PRKCH-204ENST00000553265 SPNS2Q8IVW8 549 aa10.67□□□□□ -0.7
PRKCH-204ENST00000553265 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
PRKCH-204ENST00000553265 VAC14Q08AM6 782 aa10.66□□□□□ -0.7
PRKCH-204ENST00000553265 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
PRKCH-204ENST00000553265 CCNYL3P0C7X3 344 aa10.65□□□□□ -0.7
PRKCH-204ENST00000553265 MMP16P51512 607 aa10.65□□□□□ -0.7
PRKCH-204ENST00000553265 S1PR4O95977 384 aa10.64□□□□□ -0.71
PRKCH-204ENST00000553265 SLC6A16Q9GZN6 736 aa10.64□□□□□ -0.71
PRKCH-204ENST00000553265 CCDC24Q8N4L8 307 aa10.63□□□□□ -0.71
PRKCH-204ENST00000553265 PLSCR2Q9NRY7 297 aa10.63□□□□□ -0.71
PRKCH-204ENST00000553265 GLMNQ92990 594 aa10.62□□□□□ -0.71
PRKCH-204ENST00000553265 HCSTQ9UBK5 93 aa10.61□□□□□ -0.71
PRKCH-204ENST00000553265 FKBPLQ9UIM3 349 aa10.6□□□□□ -0.71
PRKCH-204ENST00000553265 ADCY10Q96PN6 1610 aa10.59□□□□□ -0.71
PRKCH-204ENST00000553265 KCNH2Q12809 1159 aa10.59□□□□□ -0.71
PRKCH-204ENST00000553265 ADAMTS19Q8TE59 1207 aa10.59□□□□□ -0.71
PRKCH-204ENST00000553265 CALR3Q96L12 384 aaKnown RBP10.59□□□□□ -0.71
PRKCH-204ENST00000553265 EVA1BQ9NVM1 165 aa10.59□□□□□ -0.71
PRKCH-204ENST00000553265 PRG4Q92954 1404 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-204ENST00000553265 DIP2BQ9P265 1576 aa10.58□□□□□ -0.72
PRKCH-204ENST00000553265 WASHC4Q2M389 1173 aa10.58□□□□□ -0.72
PRKCH-204ENST00000553265 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-204ENST00000553265 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
PRKCH-204ENST00000553265 CCDC97Q96F63 343 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms