RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
SNRPF-205ENST00000553192 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
SNRPF-205ENST00000553192 PDGFDQ9GZP0 370 aaPredicted RBP18.05■□□□□ 0.48
SNRPF-205ENST00000553192 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
SNRPF-205ENST00000553192 ITGAEP38570 1179 aa18.04■□□□□ 0.48
SNRPF-205ENST00000553192 PMFBP1Q8TBY8 1022 aa18.04■□□□□ 0.48
SNRPF-205ENST00000553192 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
SNRPF-205ENST00000553192 PTGER2P43116 358 aa18.02■□□□□ 0.48
SNRPF-205ENST00000553192 ANO8Q9HCE9 1232 aaPredicted RBP18.02■□□□□ 0.48
SNRPF-205ENST00000553192 TRPM3Q9HCF6 1732 aaPredicted RBP18.01■□□□□ 0.47
SNRPF-205ENST00000553192 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
SNRPF-205ENST00000553192 SIRT1Q96EB6 747 aa18.01■□□□□ 0.47
SNRPF-205ENST00000553192 PRDM11Q9NQV5 511 aa18■□□□□ 0.47
SNRPF-205ENST00000553192 IFT172Q9UG01 1749 aa18■□□□□ 0.47
SNRPF-205ENST00000553192 ALS2Q96Q42 1657 aa17.99■□□□□ 0.47
SNRPF-205ENST00000553192 CASZ1Q86V15 1759 aa17.99■□□□□ 0.47
SNRPF-205ENST00000553192 CEP350Q5VT06 3117 aa17.99■□□□□ 0.47
SNRPF-205ENST00000553192 ZBTB7AO95365 584 aa17.98■□□□□ 0.47
SNRPF-205ENST00000553192 PDE3BQ13370 1112 aa17.98■□□□□ 0.47
SNRPF-205ENST00000553192 BARGINQ6ZT62 677 aa17.98■□□□□ 0.47
SNRPF-205ENST00000553192 SYT17Q9BSW7 474 aa17.98■□□□□ 0.47
SNRPF-205ENST00000553192 STRN4Q9NRL3 753 aa17.98■□□□□ 0.47
SNRPF-205ENST00000553192 MYOM1P52179 1685 aa17.98■□□□□ 0.47
SNRPF-205ENST00000553192 CRYBG1Q9Y4K1 1723 aa17.98■□□□□ 0.47
SNRPF-205ENST00000553192 CHRNA2Q15822 529 aa17.97■□□□□ 0.47
SNRPF-205ENST00000553192 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
SNRPF-205ENST00000553192 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
SNRPF-205ENST00000553192 KIAA0232Q92628 1395 aa17.96■□□□□ 0.47
SNRPF-205ENST00000553192 ANKARQ7Z5J8 1434 aa17.95■□□□□ 0.46
SNRPF-205ENST00000553192 ACIN1Q9UKV3 1341 aaKnown RBP17.95■□□□□ 0.46
SNRPF-205ENST00000553192 ATF5Q9Y2D1 282 aaPredicted RBP17.94■□□□□ 0.46
SNRPF-205ENST00000553192 PIK3C2GO75747 1445 aa17.94■□□□□ 0.46
SNRPF-205ENST00000553192 PLSCR1O15162 318 aa17.93■□□□□ 0.46
SNRPF-205ENST00000553192 SAFB2Q14151 953 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNRPF-205ENST00000553192 GIGYF1O75420 1035 aaPredicted RBP17.92■□□□□ 0.46
SNRPF-205ENST00000553192 GPRASP1Q5JY77 1395 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 SSH2Q76I76 1423 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 PTF1AQ7RTS3 328 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 PROM2Q8N271 834 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 PRAM1Q96QH2 718 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 SGIP1Q9BQI5 828 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 CHD4Q14839 1912 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 PRR36Q9H6K5 1346 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 ANKRD30BQ9BXX2 1392 aa17.91■□□□□ 0.46
SNRPF-205ENST00000553192 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
SNRPF-205ENST00000553192 LARP1Q6PKG0 1096 aaKnown RBP17.9■□□□□ 0.46
SNRPF-205ENST00000553192 ZC3H6P61129 1189 aaKnown RBP17.89■□□□□ 0.45
SNRPF-205ENST00000553192 TCP11L2Q8N4U5 519 aa17.88■□□□□ 0.45
SNRPF-205ENST00000553192 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
SNRPF-205ENST00000553192 RGPD3A6NKT7 1758 aaPredicted RBP17.86■□□□□ 0.45
SNRPF-205ENST00000553192 RGPD4Q7Z3J3 1758 aa17.86■□□□□ 0.45
SNRPF-205ENST00000553192 PAK3O75914 559 aaPredicted RBP17.86■□□□□ 0.45
SNRPF-205ENST00000553192 EVA1CP58658 441 aa17.86■□□□□ 0.45
SNRPF-205ENST00000553192 BCL11BQ9C0K0 894 aaPredicted RBP17.86■□□□□ 0.45
SNRPF-205ENST00000553192 PEAK1Q9H792 1746 aa17.86■□□□□ 0.45
SNRPF-205ENST00000553192 DHX57Q6P158 1386 aaKnown RBP17.85■□□□□ 0.45
SNRPF-205ENST00000553192 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
SNRPF-205ENST00000553192 DLC1Q96QB1 1528 aa17.84■□□□□ 0.45
SNRPF-205ENST00000553192 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
SNRPF-205ENST00000553192 OVOS2A0A0G2JMS6 1433 aa17.83■□□□□ 0.45
SNRPF-205ENST00000553192 OVOS2A0A0J9YW53 1432 aa17.83■□□□□ 0.45
SNRPF-205ENST00000553192 OVOS2Q6IE36 1432 aa17.83■□□□□ 0.45
SNRPF-205ENST00000553192 HIRIP3Q9BW71 556 aaPredicted RBP17.83■□□□□ 0.44
SNRPF-205ENST00000553192 THRAP3Q9Y2W1 955 aaKnown RBP17.83■□□□□ 0.44
SNRPF-205ENST00000553192 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.44
SNRPF-205ENST00000553192 C11orf95C9JLR9 678 aaPredicted RBP17.82■□□□□ 0.44
SNRPF-205ENST00000553192 MTFR1LQ9H019 292 aa17.82■□□□□ 0.44
SNRPF-205ENST00000553192 MAP3K5Q99683 1374 aa17.81■□□□□ 0.44
SNRPF-205ENST00000553192 SLC15A2Q16348 729 aa17.81■□□□□ 0.44
SNRPF-205ENST00000553192 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
SNRPF-205ENST00000553192 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
SNRPF-205ENST00000553192 NUTM2GQ5VZR2 741 aa17.8■□□□□ 0.44
SNRPF-205ENST00000553192 ARXQ96QS3 562 aa17.8■□□□□ 0.44
SNRPF-205ENST00000553192 POGKQ9P215 609 aa17.8■□□□□ 0.44
SNRPF-205ENST00000553192 TULP4Q9NRJ4 1543 aa17.8■□□□□ 0.44
SNRPF-205ENST00000553192 SHANK3Q9BYB0 1731 aa17.79■□□□□ 0.44
SNRPF-205ENST00000553192 STK32BQ9NY57 414 aa17.79■□□□□ 0.44
SNRPF-205ENST00000553192 LMO7Q8WWI1 1683 aa17.79■□□□□ 0.44
SNRPF-205ENST00000553192 ATP7BP35670 1465 aa17.78■□□□□ 0.44
SNRPF-205ENST00000553192 GPR162Q16538 588 aa17.78■□□□□ 0.44
SNRPF-205ENST00000553192 TXNRD1Q16881 649 aa17.78■□□□□ 0.44
SNRPF-205ENST00000553192 SBF2Q86WG5 1849 aa17.77■□□□□ 0.44
SNRPF-205ENST00000553192 MINK1Q8N4C8 1332 aaPredicted RBP17.77■□□□□ 0.44
SNRPF-205ENST00000553192 CPDO75976 1380 aa17.77■□□□□ 0.43
SNRPF-205ENST00000553192 WASLO00401 505 aaPredicted RBP17.76■□□□□ 0.43
SNRPF-205ENST00000553192 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
SNRPF-205ENST00000553192 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
SNRPF-205ENST00000553192 MARCH10Q8NA82 808 aaPredicted RBP17.74■□□□□ 0.43
SNRPF-205ENST00000553192 LRRC37A3O60309 1634 aa17.73■□□□□ 0.43
SNRPF-205ENST00000553192 DDB1Q16531 1140 aa17.73■□□□□ 0.43
SNRPF-205ENST00000553192 BCL9O00512 1426 aa17.72■□□□□ 0.43
SNRPF-205ENST00000553192 CRB1P82279 1406 aa17.72■□□□□ 0.43
SNRPF-205ENST00000553192 ADGRB1O14514 1584 aa17.71■□□□□ 0.43
SNRPF-205ENST00000553192 TRAK1Q9UPV9 953 aa17.71■□□□□ 0.43
SNRPF-205ENST00000553192 USP19O94966 1318 aa17.71■□□□□ 0.42
SNRPF-205ENST00000553192 GOLGB1Q14789 3259 aaKnown RBP17.7■□□□□ 0.42
SNRPF-205ENST00000553192 HSPA6P17066 643 aa17.7■□□□□ 0.42
SNRPF-205ENST00000553192 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
SNRPF-205ENST00000553192 NUDT16Q96DE0 195 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms