RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 NEO1Q92859 1461 aa12.23□□□□□ -0.45
PPFIA2-228ENST00000553058 RAPGEF3O95398 923 aa12.23□□□□□ -0.45
PPFIA2-228ENST00000553058 CCER1Q8TC90 406 aaPredicted RBP12.23□□□□□ -0.45
PPFIA2-228ENST00000553058 L3MBTL3Q96JM7 780 aaPredicted RBP12.23□□□□□ -0.45
PPFIA2-228ENST00000553058 TRIM34Q9BYJ4 488 aa12.23□□□□□ -0.45
PPFIA2-228ENST00000553058 HMX1Q9NP08 348 aaPredicted RBP12.23□□□□□ -0.45
PPFIA2-228ENST00000553058 MAFBQ9Y5Q3 323 aaPredicted RBP12.23□□□□□ -0.45
PPFIA2-228ENST00000553058 KIF21BO75037 1637 aa12.22□□□□□ -0.45
PPFIA2-228ENST00000553058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
PPFIA2-228ENST00000553058 PRPF38BQ5VTL8 546 aaKnown RBP12.22□□□□□ -0.45
PPFIA2-228ENST00000553058 FRMPD1Q5SYB0 1578 aa12.22□□□□□ -0.45
PPFIA2-228ENST00000553058 ERCC3P19447 782 aa12.21□□□□□ -0.45
PPFIA2-228ENST00000553058 PRR7Q8TB68 274 aa12.21□□□□□ -0.45
PPFIA2-228ENST00000553058 DNAJC14Q6Y2X3 702 aaPredicted RBP12.2□□□□□ -0.46
PPFIA2-228ENST00000553058 HECW2Q9P2P5 1572 aa12.2□□□□□ -0.46
PPFIA2-228ENST00000553058 EFCAB5A4FU69 1503 aa12.2□□□□□ -0.46
PPFIA2-228ENST00000553058 SLC34A2O95436 690 aa12.19□□□□□ -0.46
PPFIA2-228ENST00000553058 SOX11P35716 441 aa12.19□□□□□ -0.46
PPFIA2-228ENST00000553058 C6orf132Q5T0Z8 1188 aa12.19□□□□□ -0.46
PPFIA2-228ENST00000553058 SULF1Q8IWU6 871 aa12.19□□□□□ -0.46
PPFIA2-228ENST00000553058 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
PPFIA2-228ENST00000553058 PLEKHD1A6NEE1 506 aa12.17□□□□□ -0.46
PPFIA2-228ENST00000553058 CTDSPL2Q05D32 466 aa12.17□□□□□ -0.46
PPFIA2-228ENST00000553058 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
PPFIA2-228ENST00000553058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
PPFIA2-228ENST00000553058 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
PPFIA2-228ENST00000553058 ZNF16P17020 682 aaPredicted RBP12.16□□□□□ -0.46
PPFIA2-228ENST00000553058 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
PPFIA2-228ENST00000553058 TBC1D9Q6ZT07 1266 aa12.16□□□□□ -0.46
PPFIA2-228ENST00000553058 SIRT1Q96EB6 747 aa12.16□□□□□ -0.46
PPFIA2-228ENST00000553058 CDK13Q14004 1512 aaKnown RBP12.16□□□□□ -0.46
PPFIA2-228ENST00000553058 AKNAQ7Z591 1439 aa12.15□□□□□ -0.46
PPFIA2-228ENST00000553058 ADAMTSL3P82987 1691 aa12.15□□□□□ -0.46
PPFIA2-228ENST00000553058 ARHGAP35Q9NRY4 1499 aa12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 TTC37Q6PGP7 1564 aa12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 PRSS12P56730 875 aa12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 IER5LQ5T953 404 aa12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 PHLDB3Q6NSJ2 640 aa12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 CCDC125Q86Z20 511 aa12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 PTPRMP28827 1452 aa12.14□□□□□ -0.47
PPFIA2-228ENST00000553058 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
PPFIA2-228ENST00000553058 SEMA3FQ13275 785 aa12.13□□□□□ -0.47
PPFIA2-228ENST00000553058 TMEM164Q5U3C3 297 aa12.13□□□□□ -0.47
PPFIA2-228ENST00000553058 FANCAO15360 1455 aa12.13□□□□□ -0.47
PPFIA2-228ENST00000553058 DENND4BO75064 1496 aaPredicted RBP12.13□□□□□ -0.47
PPFIA2-228ENST00000553058 ATP9BO43861 1147 aa12.12□□□□□ -0.47
PPFIA2-228ENST00000553058 NOM1Q5C9Z4 860 aaKnown RBP12.12□□□□□ -0.47
PPFIA2-228ENST00000553058 BCL2L13Q9BXK5 485 aa12.12□□□□□ -0.47
PPFIA2-228ENST00000553058 ZMIZ1Q9ULJ6 1067 aa12.12□□□□□ -0.47
PPFIA2-228ENST00000553058 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 TCF3P15923 654 aa12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 PLCG2P16885 1265 aa12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 KANK4Q5T7N3 995 aaPredicted RBP12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 EYA1Q99502 592 aa12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 RICTORQ6R327 1708 aa12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 PLCH2O75038 1416 aa12.11□□□□□ -0.47
PPFIA2-228ENST00000553058 STK32AQ8WU08 396 aa12.1□□□□□ -0.47
PPFIA2-228ENST00000553058 LRRN4Q8WUT4 740 aa12.1□□□□□ -0.47
PPFIA2-228ENST00000553058 ZMYM4Q5VZL5 1548 aa12.1□□□□□ -0.47
PPFIA2-228ENST00000553058 YEATS2Q9ULM3 1422 aa12.1□□□□□ -0.47
PPFIA2-228ENST00000553058 ARID4AP29374 1257 aaPredicted RBP12.09□□□□□ -0.47
PPFIA2-228ENST00000553058 FOSBP53539 338 aa12.09□□□□□ -0.47
PPFIA2-228ENST00000553058 FMN1Q68DA7 1419 aa12.09□□□□□ -0.47
PPFIA2-228ENST00000553058 BCORL1Q5H9F3 1711 aa12.08□□□□□ -0.47
PPFIA2-228ENST00000553058 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
PPFIA2-228ENST00000553058 KDM4AO75164 1064 aa12.08□□□□□ -0.48
PPFIA2-228ENST00000553058 SIGLEC1Q9BZZ2 1709 aa12.08□□□□□ -0.48
PPFIA2-228ENST00000553058 FDX1P10109 184 aa12.07□□□□□ -0.48
PPFIA2-228ENST00000553058 MYT1Q01538 1121 aa12.07□□□□□ -0.48
PPFIA2-228ENST00000553058 POGZQ7Z3K3 1410 aa12.07□□□□□ -0.48
PPFIA2-228ENST00000553058 HELBQ8NG08 1087 aaPredicted RBP12.07□□□□□ -0.48
PPFIA2-228ENST00000553058 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
PPFIA2-228ENST00000553058 GIPC2Q8TF65 315 aa12.07□□□□□ -0.48
PPFIA2-228ENST00000553058 MADDQ8WXG6 1647 aa12.07□□□□□ -0.48
PPFIA2-228ENST00000553058 SCAPERQ9BY12 1400 aa12.06□□□□□ -0.48
PPFIA2-228ENST00000553058 DRC1Q96MC2 740 aa12.06□□□□□ -0.48
PPFIA2-228ENST00000553058 FAM198AQ9UFP1 575 aa12.06□□□□□ -0.48
PPFIA2-228ENST00000553058 NOVA2Q9UNW9 492 aaKnown RBP12.06□□□□□ -0.48
PPFIA2-228ENST00000553058 MAGI2Q86UL8 1455 aa12.06□□□□□ -0.48
PPFIA2-228ENST00000553058 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
PPFIA2-228ENST00000553058 SOWAHDA6NJG2 315 aa12.05□□□□□ -0.48
PPFIA2-228ENST00000553058 SSFA2P28290 1259 aa12.05□□□□□ -0.48
PPFIA2-228ENST00000553058 ZDHHC16Q969W1 377 aa12.05□□□□□ -0.48
PPFIA2-228ENST00000553058 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
PPFIA2-228ENST00000553058 HECW1Q76N89 1606 aa12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 TROQ12816 1431 aaPredicted RBP12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 LMTK3Q96Q04 1460 aa12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 ZFYVE16Q7Z3T8 1539 aa12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 KIF14Q15058 1648 aa12.04□□□□□ -0.48
PPFIA2-228ENST00000553058 C19orf67A6NJJ6 358 aa12.03□□□□□ -0.48
PPFIA2-228ENST00000553058 HOXA2O43364 376 aa12.03□□□□□ -0.48
PPFIA2-228ENST00000553058 EIF5BO60841 1220 aaKnown RBP12.03□□□□□ -0.48
PPFIA2-228ENST00000553058 DNAJB2P25686 324 aa12.03□□□□□ -0.48
PPFIA2-228ENST00000553058 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
PPFIA2-228ENST00000553058 USP46P62068 366 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms